RNA–Protein interactions for RNA: ENST00000341181.10

CLDND1-201, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-201ENST00000341181 STRCP1A6NGW2 1772 aa28.76■■■□□ 2.19
CLDND1-201ENST00000341181 TMF1P82094 1093 aa28.75■■■□□ 2.19
CLDND1-201ENST00000341181 POLR3GLQ9BT43 218 aa28.75■■■□□ 2.19
CLDND1-201ENST00000341181 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.74■■■□□ 2.19
CLDND1-201ENST00000341181 SIRT1Q96EB6 747 aa28.73■■■□□ 2.19
CLDND1-201ENST00000341181 AEBP2Q6ZN18 517 aaPredicted RBP28.72■■■□□ 2.19
CLDND1-201ENST00000341181 RBM33Q96EV2 1170 aaKnown RBP28.72■■■□□ 2.19
CLDND1-201ENST00000341181 DDX10Q13206 875 aaKnown RBP28.67■■■□□ 2.18
CLDND1-201ENST00000341181 ZNF335Q9H4Z2 1342 aaPredicted RBP28.67■■■□□ 2.18
CLDND1-201ENST00000341181 NKTRP30414 1462 aaKnown RBP28.66■■■□□ 2.18
CLDND1-201ENST00000341181 ADGRB2O60241 1585 aa28.64■■■□□ 2.18
CLDND1-201ENST00000341181 NALCNQ8IZF0 1738 aa28.64■■■□□ 2.18
CLDND1-201ENST00000341181 EVC2Q86UK5 1308 aa28.64■■■□□ 2.18
CLDND1-201ENST00000341181 CABP2Q9NPB3 220 aa28.63■■■□□ 2.17
CLDND1-201ENST00000341181 MYOM1P52179 1685 aa28.62■■■□□ 2.17
CLDND1-201ENST00000341181 DMRT2Q9Y5R5 561 aa28.61■■■□□ 2.17
CLDND1-201ENST00000341181 SLC24A1O60721 1099 aa28.6■■■□□ 2.17
CLDND1-201ENST00000341181 CDK19Q9BWU1 502 aa28.6■■■□□ 2.17
CLDND1-201ENST00000341181 SRPK2P78362 688 aaKnown RBP28.59■■■□□ 2.17
CLDND1-201ENST00000341181 WASLO00401 505 aaPredicted RBP28.58■■■□□ 2.17
CLDND1-201ENST00000341181 CDCA8Q53HL2 280 aa28.58■■■□□ 2.17
CLDND1-201ENST00000341181 PROSER2Q86WR7 435 aaPredicted RBP28.58■■■□□ 2.17
CLDND1-201ENST00000341181 TMEM94Q12767 1356 aa28.56■■■□□ 2.16
CLDND1-201ENST00000341181 ADGRL3Q9HAR2 1447 aa28.56■■■□□ 2.16
CLDND1-201ENST00000341181 NUTM2FA1L443 756 aa28.52■■■□□ 2.16
CLDND1-201ENST00000341181 ATP7BP35670 1465 aa28.52■■■□□ 2.16
CLDND1-201ENST00000341181 CDC42BPGQ6DT37 1551 aa28.52■■■□□ 2.16
CLDND1-201ENST00000341181 LRRC7Q96NW7 1537 aa28.51■■■□□ 2.16
CLDND1-201ENST00000341181 XIRP1Q702N8 1843 aaKnown RBP28.51■■■□□ 2.15
CLDND1-201ENST00000341181 PRR36Q9H6K5 1346 aa28.51■■■□□ 2.15
CLDND1-201ENST00000341181 C14orf37Q86TY3 774 aa28.5■■■□□ 2.15
CLDND1-201ENST00000341181 USP32Q8NFA0 1604 aa28.49■■■□□ 2.15
CLDND1-201ENST00000341181 SLC12A5Q9H2X9 1139 aa28.48■■■□□ 2.15
CLDND1-201ENST00000341181 ATAD2Q6PL18 1390 aa28.48■■■□□ 2.15
CLDND1-201ENST00000341181 MIER1Q8N108 512 aa28.48■■■□□ 2.15
CLDND1-201ENST00000341181 TMC1Q8TDI8 760 aa28.48■■■□□ 2.15
CLDND1-201ENST00000341181 PUS7Q96PZ0 661 aaKnown RBP28.48■■■□□ 2.15
CLDND1-201ENST00000341181 FMN2Q9NZ56 1722 aa28.47■■■□□ 2.15
CLDND1-201ENST00000341181 NUDT16Q96DE0 195 aaKnown RBP28.45■■■□□ 2.15
CLDND1-201ENST00000341181 PANK3Q9H999 370 aa28.44■■■□□ 2.14
CLDND1-201ENST00000341181 TOPAZ1Q8N9V7 1692 aa28.43■■■□□ 2.14
CLDND1-201ENST00000341181 RGPD8O14715 1765 aaPredicted RBP28.43■■■□□ 2.14
CLDND1-201ENST00000341181 LTBP4Q8N2S1 1624 aa28.42■■■□□ 2.14
CLDND1-201ENST00000341181 PPIP5K1Q6PFW1 1433 aa28.42■■■□□ 2.14
CLDND1-201ENST00000341181 CABP1Q9NZU7 370 aa28.41■■■□□ 2.14
CLDND1-201ENST00000341181 CD163L1Q9NR16 1453 aa28.41■■■□□ 2.14
CLDND1-201ENST00000341181 NCOA3Q9Y6Q9 1424 aa28.41■■■□□ 2.14
CLDND1-201ENST00000341181 C19orf44Q9H6X5 657 aa28.4■■■□□ 2.14
CLDND1-201ENST00000341181 CCDC61Q9Y6R9 512 aa28.38■■■□□ 2.13
CLDND1-201ENST00000341181 A0A1W2PP64 1363 aa28.37■■■□□ 2.13
CLDND1-201ENST00000341181 NINLQ9Y2I6 1382 aa28.37■■■□□ 2.13
CLDND1-201ENST00000341181 ANKARQ7Z5J8 1434 aa28.37■■■□□ 2.13
CLDND1-201ENST00000341181 PER1O15534 1290 aaPredicted RBP28.36■■■□□ 2.13
CLDND1-201ENST00000341181 CARD14Q9BXL6 1004 aa28.36■■■□□ 2.13
CLDND1-201ENST00000341181 ANKRD36BQ8N2N9 1353 aa28.36■■■□□ 2.13
CLDND1-201ENST00000341181 MSH6P52701 1360 aa28.35■■■□□ 2.13
CLDND1-201ENST00000341181 DCCP43146 1447 aa28.35■■■□□ 2.13
CLDND1-201ENST00000341181 ITSN1Q15811 1721 aa28.34■■■□□ 2.13
CLDND1-201ENST00000341181 CNGB1Q14028 1251 aaPredicted RBP28.32■■■□□ 2.12
CLDND1-201ENST00000341181 MST1RQ04912 1400 aa28.31■■■□□ 2.12
CLDND1-201ENST00000341181 PMFBP1Q8TBY8 1022 aa28.31■■■□□ 2.12
CLDND1-201ENST00000341181 NSD3Q9BZ95 1437 aa28.31■■■□□ 2.12
CLDND1-201ENST00000341181 ATF3P18847 181 aa28.3■■■□□ 2.12
CLDND1-201ENST00000341181 C1orf167Q5SNV9 1468 aa28.3■■■□□ 2.12
CLDND1-201ENST00000341181 CPSF1Q10570 1443 aaKnown RBP28.29■■■□□ 2.12
CLDND1-201ENST00000341181 ACEP12821 1306 aa28.27■■■□□ 2.12
CLDND1-201ENST00000341181 PLEKHG3A1L390 1219 aa28.27■■■□□ 2.12
CLDND1-201ENST00000341181 ORAI2Q96SN7 254 aa28.27■■■□□ 2.12
CLDND1-201ENST00000341181 TERF2IPQ9NYB0 399 aa28.27■■■□□ 2.12
CLDND1-201ENST00000341181 AKAP12Q02952 1782 aa28.26■■■□□ 2.11
CLDND1-201ENST00000341181 CADPS2Q86UW7 1296 aa28.26■■■□□ 2.11
CLDND1-201ENST00000341181 ESCO1Q5FWF5 840 aa28.25■■■□□ 2.11
CLDND1-201ENST00000341181 KNSTRNQ9Y448 316 aa28.24■■■□□ 2.11
CLDND1-201ENST00000341181 MON2Q7Z3U7 1717 aa28.24■■■□□ 2.11
CLDND1-201ENST00000341181 HDGFL2Q7Z4V5 671 aaPredicted RBP28.24■■■□□ 2.11
CLDND1-201ENST00000341181 KTN1Q86UP2 1357 aaKnown RBP28.23■■■□□ 2.11
CLDND1-201ENST00000341181 AMER1Q5JTC6 1135 aaPredicted RBP28.23■■■□□ 2.11
CLDND1-201ENST00000341181 POLR3AO14802 1390 aaPredicted RBP28.23■■■□□ 2.11
CLDND1-201ENST00000341181 PHF8Q9UPP1 1060 aa28.22■■■□□ 2.11
CLDND1-201ENST00000341181 CC2D1BQ5T0F9 858 aaKnown RBP28.21■■■□□ 2.11
CLDND1-201ENST00000341181 NRKQ7Z2Y5 1582 aa28.21■■■□□ 2.11
CLDND1-201ENST00000341181 NGDNQ8NEJ9 315 aaKnown RBP28.2■■■□□ 2.1
CLDND1-201ENST00000341181 USP6P35125 1406 aa28.19■■■□□ 2.1
CLDND1-201ENST00000341181 ANP32CO43423 234 aa28.18■■■□□ 2.1
CLDND1-201ENST00000341181 PRKRIP1Q9H875 184 aaPredicted RBP28.18■■■□□ 2.1
CLDND1-201ENST00000341181 EDC4Q6P2E9 1401 aaKnown RBP28.17■■■□□ 2.1
CLDND1-201ENST00000341181 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.17■■■□□ 2.1
CLDND1-201ENST00000341181 SLAIN2Q9P270 581 aa28.15■■■□□ 2.1
CLDND1-201ENST00000341181 KIF1AQ12756 1690 aa28.14■■■□□ 2.1
CLDND1-201ENST00000341181 CGNL1Q0VF96 1302 aa28.14■■■□□ 2.1
CLDND1-201ENST00000341181 FOXO3O43524 673 aa28.14■■■□□ 2.09
CLDND1-201ENST00000341181 ZNF692Q9BU19 519 aaPredicted RBP28.14■■■□□ 2.09
CLDND1-201ENST00000341181 SSH2Q76I76 1423 aa28.13■■■□□ 2.09
CLDND1-201ENST00000341181 DDX17Q92841 729 aaKnown RBP28.13■■■□□ 2.09
CLDND1-201ENST00000341181 XPCQ01831 940 aaPredicted RBP28.11■■■□□ 2.09
CLDND1-201ENST00000341181 BRINP3Q76B58 766 aa28.11■■■□□ 2.09
CLDND1-201ENST00000341181 PARD3Q8TEW0 1356 aa28.11■■■□□ 2.09
CLDND1-201ENST00000341181 NPC1L1Q9UHC9 1359 aa28.11■■■□□ 2.09
CLDND1-201ENST00000341181 KIF20BQ96Q89 1820 aa28.11■■■□□ 2.09
CLDND1-201ENST00000341181 YTHDC1Q96MU7 727 aaKnown RBP28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms