RNA–Protein interactions for RNA: ENST00000340829.9

CDK13-202, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK13, Length 5,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-202ENST00000340829 CSPP1Q1MSJ5 1256 aa23.78■■□□□ 1.4
CDK13-202ENST00000340829 CDK19Q9BWU1 502 aa23.76■■□□□ 1.39
CDK13-202ENST00000340829 CHMP5Q9NZZ3 219 aa23.76■■□□□ 1.39
CDK13-202ENST00000340829 ANO2Q9NQ90 1003 aa23.75■■□□□ 1.39
CDK13-202ENST00000340829 GRIN2AQ12879 1464 aa23.75■■□□□ 1.39
CDK13-202ENST00000340829 PDE3AQ14432 1141 aa23.75■■□□□ 1.39
CDK13-202ENST00000340829 PDZRN3Q9UPQ7 1066 aa23.74■■□□□ 1.39
CDK13-202ENST00000340829 UNC13AQ9UPW8 1703 aa23.73■■□□□ 1.39
CDK13-202ENST00000340829 TOMM22Q9NS69 142 aa23.73■■□□□ 1.39
CDK13-202ENST00000340829 NCOA1Q15788 1441 aa23.73■■□□□ 1.39
CDK13-202ENST00000340829 SLC52A1Q9NWF4 448 aa23.73■■□□□ 1.39
CDK13-202ENST00000340829 IFIT2P09913 472 aaKnown RBP23.72■■□□□ 1.39
CDK13-202ENST00000340829 SKOR2Q2VWA4 1001 aaPredicted RBP23.72■■□□□ 1.39
CDK13-202ENST00000340829 INTS3Q68E01 1043 aaKnown RBP23.72■■□□□ 1.39
CDK13-202ENST00000340829 NFKBIBQ15653 356 aa23.71■■□□□ 1.39
CDK13-202ENST00000340829 PHF14O94880 888 aa23.71■■□□□ 1.39
CDK13-202ENST00000340829 NOB1Q9ULX3 412 aaKnown RBP23.71■■□□□ 1.39
CDK13-202ENST00000340829 EVA1CP58658 441 aa23.7■■□□□ 1.39
CDK13-202ENST00000340829 C1orf115Q9H7X2 142 aa23.7■■□□□ 1.39
CDK13-202ENST00000340829 TWISTNBQ3B726 338 aaPredicted RBP23.7■■□□□ 1.38
CDK13-202ENST00000340829 RUFY2Q8WXA3 655 aa23.69■■□□□ 1.38
CDK13-202ENST00000340829 ARID3AQ99856 593 aa23.69■■□□□ 1.38
CDK13-202ENST00000340829 DDX58O95786 925 aaKnown RBP23.69■■□□□ 1.38
CDK13-202ENST00000340829 GTF2E1P29083 439 aaPredicted RBP23.68■■□□□ 1.38
CDK13-202ENST00000340829 ZNF608Q9ULD9 1512 aaPredicted RBP23.68■■□□□ 1.38
CDK13-202ENST00000340829 H3BQV1 296 aa23.67■■□□□ 1.38
CDK13-202ENST00000340829 IFFO2Q5TF58 517 aa23.67■■□□□ 1.38
CDK13-202ENST00000340829 KIF3AQ9Y496 699 aa23.67■■□□□ 1.38
CDK13-202ENST00000340829 ZKSCAN1P17029 563 aaPredicted RBP23.66■■□□□ 1.38
CDK13-202ENST00000340829 WDR63Q8IWG1 891 aa23.66■■□□□ 1.38
CDK13-202ENST00000340829 CDC45O75419 566 aa23.66■■□□□ 1.38
CDK13-202ENST00000340829 BACH2Q9BYV9 841 aa23.66■■□□□ 1.38
CDK13-202ENST00000340829 G3BP1Q13283 466 aaKnown RBP eCLIP23.66■■□□□ 1.38
CDK13-202ENST00000340829 RPRD2Q5VT52 1461 aaKnown RBP23.66■■□□□ 1.38
CDK13-202ENST00000340829 FRAT2O75474 233 aaPredicted RBP23.65■■□□□ 1.38
CDK13-202ENST00000340829 ABTB2Q8N961 1025 aa23.65■■□□□ 1.38
CDK13-202ENST00000340829 FAM184AQ8NB25 1140 aa23.65■■□□□ 1.38
CDK13-202ENST00000340829 KIF14Q15058 1648 aa23.65■■□□□ 1.38
CDK13-202ENST00000340829 ATP6V1DQ9Y5K8 247 aa23.65■■□□□ 1.38
CDK13-202ENST00000340829 RPGRIP1LQ68CZ1 1315 aa23.65■■□□□ 1.38
CDK13-202ENST00000340829 SF3A1Q15459 793 aaKnown RBP23.65■■□□□ 1.38
CDK13-202ENST00000340829 AIMP1Q12904 312 aaKnown RBP23.65■■□□□ 1.38
CDK13-202ENST00000340829 SULT6B1Q6IMI4 303 aa23.65■■□□□ 1.38
CDK13-202ENST00000340829 RAPGEF4Q8WZA2 1011 aa23.65■■□□□ 1.38
CDK13-202ENST00000340829 NSD3Q9BZ95 1437 aa23.65■■□□□ 1.38
CDK13-202ENST00000340829 UBTFL1P0CB47 393 aaPredicted RBP23.64■■□□□ 1.38
CDK13-202ENST00000340829 PTPRKQ15262 1439 aa23.63■■□□□ 1.37
CDK13-202ENST00000340829 NLRP2Q9NX02 1062 aa23.63■■□□□ 1.37
CDK13-202ENST00000340829 TPM4P67936 248 aa23.62■■□□□ 1.37
CDK13-202ENST00000340829 SLFN5Q08AF3 891 aa23.62■■□□□ 1.37
CDK13-202ENST00000340829 GAS2L2Q8NHY3 880 aa23.61■■□□□ 1.37
CDK13-202ENST00000340829 THOC2Q8NI27 1593 aaKnown RBP23.61■■□□□ 1.37
CDK13-202ENST00000340829 WWC1Q8IX03 1113 aa23.61■■□□□ 1.37
CDK13-202ENST00000340829 RTEL1-TNFRSF6BF6WH68 1400 aa23.6■■□□□ 1.37
CDK13-202ENST00000340829 HSP90AB4PQ58FF6 505 aa23.59■■□□□ 1.37
CDK13-202ENST00000340829 ATF7IPQ6VMQ6 1270 aa23.59■■□□□ 1.37
CDK13-202ENST00000340829 MAPKBP1O60336 1514 aa23.59■■□□□ 1.37
CDK13-202ENST00000340829 RIC3Q7Z5B4 369 aa23.59■■□□□ 1.37
CDK13-202ENST00000340829 MVPQ14764 893 aaKnown RBP23.58■■□□□ 1.37
CDK13-202ENST00000340829 CCDC30Q5VVM6 783 aa23.58■■□□□ 1.37
CDK13-202ENST00000340829 RRS1Q15050 365 aaKnown RBP23.58■■□□□ 1.37
CDK13-202ENST00000340829 MCTP1Q6DN14 999 aa23.58■■□□□ 1.37
CDK13-202ENST00000340829 ESCO1Q5FWF5 840 aa23.57■■□□□ 1.36
CDK13-202ENST00000340829 ATAD2Q6PL18 1390 aa23.57■■□□□ 1.36
CDK13-202ENST00000340829 SLC26A8Q96RN1 970 aa23.57■■□□□ 1.36
CDK13-202ENST00000340829 ZNF692Q9BU19 519 aaPredicted RBP23.57■■□□□ 1.36
CDK13-202ENST00000340829 SLC4A2P04920 1241 aa23.56■■□□□ 1.36
CDK13-202ENST00000340829 SYTL4Q96C24 671 aaPredicted RBP23.56■■□□□ 1.36
CDK13-202ENST00000340829 CCDC34Q96HJ3 373 aa23.56■■□□□ 1.36
CDK13-202ENST00000340829 GNAI3P08754 354 aa23.56■■□□□ 1.36
CDK13-202ENST00000340829 ATF3P18847 181 aa23.56■■□□□ 1.36
CDK13-202ENST00000340829 ADGRF5Q8IZF2 1346 aa23.56■■□□□ 1.36
CDK13-202ENST00000340829 NUCB2P80303 420 aa23.56■■□□□ 1.36
CDK13-202ENST00000340829 ERC2O15083 957 aa23.55■■□□□ 1.36
CDK13-202ENST00000340829 SURF6O75683 361 aaKnown RBP23.55■■□□□ 1.36
CDK13-202ENST00000340829 CT47B1P0C2W7 299 aaPredicted RBP23.54■■□□□ 1.36
CDK13-202ENST00000340829 C20orf194Q5TEA3 1177 aa23.54■■□□□ 1.36
CDK13-202ENST00000340829 RASSF8Q8NHQ8 419 aa23.54■■□□□ 1.36
CDK13-202ENST00000340829 GCC1Q96CN9 775 aa23.54■■□□□ 1.36
CDK13-202ENST00000340829 NINLQ9Y2I6 1382 aa23.54■■□□□ 1.36
CDK13-202ENST00000340829 RNF20Q5VTR2 975 aa23.53■■□□□ 1.36
CDK13-202ENST00000340829 VPS37CA5D8V6 355 aaPredicted RBP23.53■■□□□ 1.36
CDK13-202ENST00000340829 GPRASP1Q5JY77 1395 aa23.53■■□□□ 1.36
CDK13-202ENST00000340829 TMPOP42166 694 aaKnown RBP23.52■■□□□ 1.36
CDK13-202ENST00000340829 SMC3Q9UQE7 1217 aa23.52■■□□□ 1.36
CDK13-202ENST00000340829 LRRFIP1Q32MZ4 808 aaKnown RBP23.52■■□□□ 1.36
CDK13-202ENST00000340829 GPATCH8Q9UKJ3 1502 aaKnown RBP23.51■■□□□ 1.35
CDK13-202ENST00000340829 SKAP1Q86WV1 359 aa23.51■■□□□ 1.35
CDK13-202ENST00000340829 TMX4Q9H1E5 349 aaPredicted RBP23.51■■□□□ 1.35
CDK13-202ENST00000340829 ADGRL1O94910 1474 aa23.51■■□□□ 1.35
CDK13-202ENST00000340829 CREBRFQ8IUR6 639 aa23.5■■□□□ 1.35
CDK13-202ENST00000340829 FCHSD2O94868 740 aa23.5■■□□□ 1.35
CDK13-202ENST00000340829 WAPLQ7Z5K2 1190 aa23.5■■□□□ 1.35
CDK13-202ENST00000340829 APPP05067 770 aa23.5■■□□□ 1.35
CDK13-202ENST00000340829 NEUROD6Q96NK8 337 aa23.5■■□□□ 1.35
CDK13-202ENST00000340829 CD109Q6YHK3 1445 aa23.49■■□□□ 1.35
CDK13-202ENST00000340829 CLSTN1O94985 981 aa23.49■■□□□ 1.35
CDK13-202ENST00000340829 GNAI2P04899 355 aa23.48■■□□□ 1.35
CDK13-202ENST00000340829 HDGFL1Q5TGJ6 251 aa23.48■■□□□ 1.35
CDK13-202ENST00000340829 THEMISQ8N1K5 641 aaPredicted RBP23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms