RNA–Protein interactions for RNA: ENST00000340473.7

GTF2F2-201, Transcript of general transcription factor IIF subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F2, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F2-201ENST00000340473 MINK1Q8N4C8 1332 aaPredicted RBP18.58■□□□□ 0.56
GTF2F2-201ENST00000340473 TULP4Q9NRJ4 1543 aa18.57■□□□□ 0.56
GTF2F2-201ENST00000340473 SLC24A1O60721 1099 aa18.56■□□□□ 0.56
GTF2F2-201ENST00000340473 NWD1Q149M9 1564 aa18.56■□□□□ 0.56
GTF2F2-201ENST00000340473 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.54■□□□□ 0.56
GTF2F2-201ENST00000340473 DIEXFQ68CQ4 756 aaKnown RBP18.54■□□□□ 0.56
GTF2F2-201ENST00000340473 EVC2Q86UK5 1308 aa18.53■□□□□ 0.56
GTF2F2-201ENST00000340473 CDCA8Q53HL2 280 aa18.53■□□□□ 0.56
GTF2F2-201ENST00000340473 STRCP1A6NGW2 1772 aa18.51■□□□□ 0.55
GTF2F2-201ENST00000340473 ADGRB2O60241 1585 aa18.5■□□□□ 0.55
GTF2F2-201ENST00000340473 CABP2Q9NPB3 220 aa18.49■□□□□ 0.55
GTF2F2-201ENST00000340473 MYOM1P52179 1685 aa18.49■□□□□ 0.55
GTF2F2-201ENST00000340473 NKTRP30414 1462 aaKnown RBP18.48■□□□□ 0.55
GTF2F2-201ENST00000340473 RBM33Q96EV2 1170 aaKnown RBP18.48■□□□□ 0.55
GTF2F2-201ENST00000340473 CDK19Q9BWU1 502 aa18.48■□□□□ 0.55
GTF2F2-201ENST00000340473 SRPK2P78362 688 aaKnown RBP18.47■□□□□ 0.55
GTF2F2-201ENST00000340473 WASLO00401 505 aaPredicted RBP18.47■□□□□ 0.55
GTF2F2-201ENST00000340473 PUS7Q96PZ0 661 aaKnown RBP18.46■□□□□ 0.55
GTF2F2-201ENST00000340473 DMRT2Q9Y5R5 561 aa18.46■□□□□ 0.55
GTF2F2-201ENST00000340473 AEBP2Q6ZN18 517 aaPredicted RBP18.46■□□□□ 0.55
GTF2F2-201ENST00000340473 NALCNQ8IZF0 1738 aa18.45■□□□□ 0.54
GTF2F2-201ENST00000340473 PROSER2Q86WR7 435 aaPredicted RBP18.45■□□□□ 0.54
GTF2F2-201ENST00000340473 ZNF335Q9H4Z2 1342 aaPredicted RBP18.44■□□□□ 0.54
GTF2F2-201ENST00000340473 ATAD2Q6PL18 1390 aa18.42■□□□□ 0.54
GTF2F2-201ENST00000340473 ADGRL3Q9HAR2 1447 aa18.42■□□□□ 0.54
GTF2F2-201ENST00000340473 PANK3Q9H999 370 aa18.41■□□□□ 0.54
GTF2F2-201ENST00000340473 TMC1Q8TDI8 760 aa18.41■□□□□ 0.54
GTF2F2-201ENST00000340473 SLC12A5Q9H2X9 1139 aa18.41■□□□□ 0.54
GTF2F2-201ENST00000340473 TMEM94Q12767 1356 aa18.4■□□□□ 0.54
GTF2F2-201ENST00000340473 ATP7BP35670 1465 aa18.4■□□□□ 0.54
GTF2F2-201ENST00000340473 PRR36Q9H6K5 1346 aa18.4■□□□□ 0.54
GTF2F2-201ENST00000340473 CDC42BPGQ6DT37 1551 aa18.39■□□□□ 0.53
GTF2F2-201ENST00000340473 C14orf37Q86TY3 774 aa18.38■□□□□ 0.53
GTF2F2-201ENST00000340473 NUDT16Q96DE0 195 aaKnown RBP18.38■□□□□ 0.53
GTF2F2-201ENST00000340473 USP32Q8NFA0 1604 aa18.38■□□□□ 0.53
GTF2F2-201ENST00000340473 FMN2Q9NZ56 1722 aa18.38■□□□□ 0.53
GTF2F2-201ENST00000340473 NUTM2FA1L443 756 aa18.37■□□□□ 0.53
GTF2F2-201ENST00000340473 NINLQ9Y2I6 1382 aa18.37■□□□□ 0.53
GTF2F2-201ENST00000340473 LRRC7Q96NW7 1537 aa18.37■□□□□ 0.53
GTF2F2-201ENST00000340473 XIRP1Q702N8 1843 aaKnown RBP18.36■□□□□ 0.53
GTF2F2-201ENST00000340473 CABP1Q9NZU7 370 aa18.36■□□□□ 0.53
GTF2F2-201ENST00000340473 PPIP5K1Q6PFW1 1433 aa18.36■□□□□ 0.53
GTF2F2-201ENST00000340473 NCOA3Q9Y6Q9 1424 aa18.36■□□□□ 0.53
GTF2F2-201ENST00000340473 TOPAZ1Q8N9V7 1692 aa18.35■□□□□ 0.53
GTF2F2-201ENST00000340473 PER1O15534 1290 aaPredicted RBP18.35■□□□□ 0.53
GTF2F2-201ENST00000340473 CCDC61Q9Y6R9 512 aa18.34■□□□□ 0.53
GTF2F2-201ENST00000340473 CD163L1Q9NR16 1453 aa18.34■□□□□ 0.53
GTF2F2-201ENST00000340473 RGPD8O14715 1765 aaPredicted RBP18.34■□□□□ 0.53
GTF2F2-201ENST00000340473 ANKRD36BQ8N2N9 1353 aa18.34■□□□□ 0.53
GTF2F2-201ENST00000340473 CARD14Q9BXL6 1004 aa18.33■□□□□ 0.53
GTF2F2-201ENST00000340473 C19orf44Q9H6X5 657 aa18.33■□□□□ 0.53
GTF2F2-201ENST00000340473 A0A1W2PP64 1363 aa18.33■□□□□ 0.52
GTF2F2-201ENST00000340473 MIER1Q8N108 512 aa18.33■□□□□ 0.52
GTF2F2-201ENST00000340473 ANKARQ7Z5J8 1434 aa18.32■□□□□ 0.52
GTF2F2-201ENST00000340473 ITSN1Q15811 1721 aa18.31■□□□□ 0.52
GTF2F2-201ENST00000340473 ANP32CO43423 234 aa18.29■□□□□ 0.52
GTF2F2-201ENST00000340473 TERF2IPQ9NYB0 399 aa18.29■□□□□ 0.52
GTF2F2-201ENST00000340473 KNSTRNQ9Y448 316 aa18.29■□□□□ 0.52
GTF2F2-201ENST00000340473 LTBP4Q8N2S1 1624 aa18.29■□□□□ 0.52
GTF2F2-201ENST00000340473 DCCP43146 1447 aa18.29■□□□□ 0.52
GTF2F2-201ENST00000340473 NSD3Q9BZ95 1437 aa18.29■□□□□ 0.52
GTF2F2-201ENST00000340473 CNGB1Q14028 1251 aaPredicted RBP18.29■□□□□ 0.52
GTF2F2-201ENST00000340473 MSH6P52701 1360 aa18.28■□□□□ 0.52
GTF2F2-201ENST00000340473 CPSF1Q10570 1443 aaKnown RBP18.28■□□□□ 0.52
GTF2F2-201ENST00000340473 PLEKHG3A1L390 1219 aa18.28■□□□□ 0.52
GTF2F2-201ENST00000340473 HDGFL2Q7Z4V5 671 aaPredicted RBP18.27■□□□□ 0.52
GTF2F2-201ENST00000340473 AKAP12Q02952 1782 aa18.26■□□□□ 0.51
GTF2F2-201ENST00000340473 ATF3P18847 181 aa18.26■□□□□ 0.51
GTF2F2-201ENST00000340473 AMER1Q5JTC6 1135 aaPredicted RBP18.26■□□□□ 0.51
GTF2F2-201ENST00000340473 PMFBP1Q8TBY8 1022 aa18.26■□□□□ 0.51
GTF2F2-201ENST00000340473 ACEP12821 1306 aa18.26■□□□□ 0.51
GTF2F2-201ENST00000340473 PRKRIP1Q9H875 184 aaPredicted RBP18.26■□□□□ 0.51
GTF2F2-201ENST00000340473 MST1RQ04912 1400 aa18.25■□□□□ 0.51
GTF2F2-201ENST00000340473 C1orf167Q5SNV9 1468 aa18.25■□□□□ 0.51
GTF2F2-201ENST00000340473 CC2D1BQ5T0F9 858 aaKnown RBP18.25■□□□□ 0.51
GTF2F2-201ENST00000340473 MON2Q7Z3U7 1717 aa18.24■□□□□ 0.51
GTF2F2-201ENST00000340473 KTN1Q86UP2 1357 aaKnown RBP18.24■□□□□ 0.51
GTF2F2-201ENST00000340473 CADPS2Q86UW7 1296 aa18.24■□□□□ 0.51
GTF2F2-201ENST00000340473 POLR3AO14802 1390 aaPredicted RBP18.24■□□□□ 0.51
GTF2F2-201ENST00000340473 ESCO1Q5FWF5 840 aa18.23■□□□□ 0.51
GTF2F2-201ENST00000340473 ORAI2Q96SN7 254 aa18.22■□□□□ 0.51
GTF2F2-201ENST00000340473 PHF8Q9UPP1 1060 aa18.22■□□□□ 0.51
GTF2F2-201ENST00000340473 NPC1L1Q9UHC9 1359 aa18.22■□□□□ 0.51
GTF2F2-201ENST00000340473 NGDNQ8NEJ9 315 aaKnown RBP18.21■□□□□ 0.51
GTF2F2-201ENST00000340473 ZNF692Q9BU19 519 aaPredicted RBP18.21■□□□□ 0.51
GTF2F2-201ENST00000340473 CGNL1Q0VF96 1302 aa18.21■□□□□ 0.51
GTF2F2-201ENST00000340473 EDC4Q6P2E9 1401 aaKnown RBP18.21■□□□□ 0.51
GTF2F2-201ENST00000340473 PARD3Q8TEW0 1356 aa18.2■□□□□ 0.5
GTF2F2-201ENST00000340473 USP6P35125 1406 aa18.2■□□□□ 0.5
GTF2F2-201ENST00000340473 NRKQ7Z2Y5 1582 aa18.2■□□□□ 0.5
GTF2F2-201ENST00000340473 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.19■□□□□ 0.5
GTF2F2-201ENST00000340473 RALBP1Q15311 655 aa18.18■□□□□ 0.5
GTF2F2-201ENST00000340473 KIF20BQ96Q89 1820 aa18.17■□□□□ 0.5
GTF2F2-201ENST00000340473 SSH2Q76I76 1423 aa18.17■□□□□ 0.5
GTF2F2-201ENST00000340473 KIF1AQ12756 1690 aa18.17■□□□□ 0.5
GTF2F2-201ENST00000340473 FYB1O15117 783 aa18.17■□□□□ 0.5
GTF2F2-201ENST00000340473 TTC21BQ7Z4L5 1316 aa18.16■□□□□ 0.5
GTF2F2-201ENST00000340473 NSD2O96028 1365 aa18.16■□□□□ 0.5
GTF2F2-201ENST00000340473 GGNBP2Q9H3C7 697 aa18.15■□□□□ 0.5
GTF2F2-201ENST00000340473 SLAIN2Q9P270 581 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms