RNA–Protein interactions for RNA: ENST00000340170.8

HIRA-202, Transcript of histone cell cycle regulator, humanhuman

TSL 1 (best) BASIC

Gene HIRA, Length 3,395 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIRA-202ENST00000340170 STAC3Q96MF2 364 aa28.49■■■□□ 2.15
HIRA-202ENST00000340170 PDZRN3Q9UPQ7 1066 aa28.49■■■□□ 2.15
HIRA-202ENST00000340170 USP19O94966 1318 aa28.49■■■□□ 2.15
HIRA-202ENST00000340170 ADGRL1O94910 1474 aa28.49■■■□□ 2.15
HIRA-202ENST00000340170 LAMC1P11047 1609 aa28.47■■■□□ 2.15
HIRA-202ENST00000340170 ZCCHC11Q5TAX3 1644 aaKnown RBP28.46■■■□□ 2.15
HIRA-202ENST00000340170 TRPM2O94759 1503 aa28.46■■■□□ 2.15
HIRA-202ENST00000340170 FAM43AQ8N2R8 423 aa28.46■■■□□ 2.15
HIRA-202ENST00000340170 SMC4Q9NTJ3 1288 aa28.46■■■□□ 2.15
HIRA-202ENST00000340170 SYNMO15061 1565 aa28.45■■■□□ 2.14
HIRA-202ENST00000340170 ITPRIPQ8IWB1 547 aa28.45■■■□□ 2.14
HIRA-202ENST00000340170 TBC1D2Q9BYX2 928 aa28.44■■■□□ 2.14
HIRA-202ENST00000340170 MINK1Q8N4C8 1332 aaPredicted RBP28.43■■■□□ 2.14
HIRA-202ENST00000340170 PTPRTO14522 1441 aa28.43■■■□□ 2.14
HIRA-202ENST00000340170 SLC24A1O60721 1099 aa28.42■■■□□ 2.14
HIRA-202ENST00000340170 FBLN1P23142 703 aa28.42■■■□□ 2.14
HIRA-202ENST00000340170 RAPGEF3O95398 923 aa28.42■■■□□ 2.14
HIRA-202ENST00000340170 RSPH6AQ9H0K4 717 aa28.42■■■□□ 2.14
HIRA-202ENST00000340170 RNF17Q9BXT8 1623 aaKnown RBP28.42■■■□□ 2.14
HIRA-202ENST00000340170 ZFYVE16Q7Z3T8 1539 aa28.41■■■□□ 2.14
HIRA-202ENST00000340170 MAPK8IP3Q9UPT6 1336 aa28.41■■■□□ 2.14
HIRA-202ENST00000340170 UBE2Q2Q8WVN8 375 aa28.41■■■□□ 2.14
HIRA-202ENST00000340170 EXOSC9Q06265 439 aaKnown RBP28.4■■■□□ 2.14
HIRA-202ENST00000340170 PMFBP1Q8TBY8 1022 aa28.4■■■□□ 2.14
HIRA-202ENST00000340170 GOLGA6L3A6NEY3 463 aa28.39■■■□□ 2.14
HIRA-202ENST00000340170 IQGAP1P46940 1657 aa28.39■■■□□ 2.13
HIRA-202ENST00000340170 MYH16Q9H6N6 1097 aa28.38■■■□□ 2.13
HIRA-202ENST00000340170 ATP7AQ04656 1500 aa28.38■■■□□ 2.13
HIRA-202ENST00000340170 RWDD1Q9H446 243 aaPredicted RBP28.38■■■□□ 2.13
HIRA-202ENST00000340170 NPC1L1Q9UHC9 1359 aa28.38■■■□□ 2.13
HIRA-202ENST00000340170 KDM5AP29375 1690 aaKnown RBP28.37■■■□□ 2.13
HIRA-202ENST00000340170 XRCC6P12956 609 aaKnown RBP eCLIP28.36■■■□□ 2.13
HIRA-202ENST00000340170 RTEL1-TNFRSF6BF6WH68 1400 aa28.36■■■□□ 2.13
HIRA-202ENST00000340170 SPHKAPQ2M3C7 1700 aa28.36■■■□□ 2.13
HIRA-202ENST00000340170 C14orf93Q9H972 538 aaKnown RBP28.35■■■□□ 2.13
HIRA-202ENST00000340170 POLR3AO14802 1390 aaPredicted RBP28.35■■■□□ 2.13
HIRA-202ENST00000340170 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.34■■■□□ 2.133e-6■■■■□ 22.6
HIRA-202ENST00000340170 DZIP1LQ8IYY4 767 aaKnown RBP28.34■■■□□ 2.13
HIRA-202ENST00000340170 EVC2Q86UK5 1308 aa28.34■■■□□ 2.13
HIRA-202ENST00000340170 ELL2O00472 640 aaPredicted RBP28.34■■■□□ 2.13
HIRA-202ENST00000340170 ZKSCAN2Q63HK3 967 aa28.34■■■□□ 2.13
HIRA-202ENST00000340170 PNNQ9H307 717 aaKnown RBP28.34■■■□□ 2.13
HIRA-202ENST00000340170 L1TD1Q5T7N2 865 aaKnown RBP28.32■■■□□ 2.12
HIRA-202ENST00000340170 STAG3Q9UJ98 1225 aa28.31■■■□□ 2.12
HIRA-202ENST00000340170 HSP90AA1P07900 732 aaKnown RBP28.3■■■□□ 2.12
HIRA-202ENST00000340170 WDR63Q8IWG1 891 aa28.29■■■□□ 2.12
HIRA-202ENST00000340170 RIPK4P57078 832 aa28.28■■■□□ 2.12
HIRA-202ENST00000340170 MVPQ14764 893 aaKnown RBP28.28■■■□□ 2.12
HIRA-202ENST00000340170 MYOM1P52179 1685 aa28.28■■■□□ 2.12
HIRA-202ENST00000340170 SSH1Q8WYL5 1049 aa28.28■■■□□ 2.12
HIRA-202ENST00000340170 NGEFQ8N5V2 710 aa28.28■■■□□ 2.12
HIRA-202ENST00000340170 ABCA6Q8N139 1617 aa28.27■■■□□ 2.12
HIRA-202ENST00000340170 NOB1Q9ULX3 412 aaKnown RBP28.27■■■□□ 2.12
HIRA-202ENST00000340170 TRAK2O60296 914 aa28.26■■■□□ 2.11
HIRA-202ENST00000340170 VSIG10Q8N0Z9 540 aa28.26■■■□□ 2.11
HIRA-202ENST00000340170 MCM4P33991 863 aa28.26■■■□□ 2.11
HIRA-202ENST00000340170 THUMPD2Q9BTF0 503 aaKnown RBP28.25■■■□□ 2.11
HIRA-202ENST00000340170 C22orf23Q9BZE7 217 aa28.25■■■□□ 2.11
HIRA-202ENST00000340170 VGFO15240 615 aaPredicted RBP28.25■■■□□ 2.11
HIRA-202ENST00000340170 TRIM27P14373 513 aa28.25■■■□□ 2.11
HIRA-202ENST00000340170 ASXL2Q76L83 1435 aa28.24■■■□□ 2.11
HIRA-202ENST00000340170 CEP152O94986 1710 aa28.24■■■□□ 2.11
HIRA-202ENST00000340170 SHROOM2Q13796 1616 aa28.24■■■□□ 2.11
HIRA-202ENST00000340170 LNPKQ9C0E8 428 aa28.24■■■□□ 2.11
HIRA-202ENST00000340170 HMOX1P09601 288 aa28.24■■■□□ 2.11
HIRA-202ENST00000340170 TBC1D32Q96NH3 1257 aa28.24■■■□□ 2.11
HIRA-202ENST00000340170 PRAM1Q96QH2 718 aa28.24■■■□□ 2.11
HIRA-202ENST00000340170 TMPOP42166 694 aaKnown RBP28.23■■■□□ 2.11
HIRA-202ENST00000340170 IDI1Q13907 227 aa28.23■■■□□ 2.11
HIRA-202ENST00000340170 C1orf115Q9H7X2 142 aa28.22■■■□□ 2.11
HIRA-202ENST00000340170 TET3O43151 1660 aa28.22■■■□□ 2.11
HIRA-202ENST00000340170 MAP3K4Q9Y6R4 1608 aa28.22■■■□□ 2.11
HIRA-202ENST00000340170 ANTXR1Q9H6X2 564 aa28.21■■■□□ 2.11
HIRA-202ENST00000340170 TMEM57Q8N5G2 664 aa28.2■■■□□ 2.11
HIRA-202ENST00000340170 NPATQ14207 1427 aa28.2■■■□□ 2.1
HIRA-202ENST00000340170 HSCBQ8IWL3 235 aa28.18■■■□□ 2.1
HIRA-202ENST00000340170 ARID3AQ99856 593 aa28.17■■■□□ 2.1
HIRA-202ENST00000340170 CLASP1Q7Z460 1538 aa28.16■■■□□ 2.1
HIRA-202ENST00000340170 CABP1Q9NZU7 370 aa28.16■■■□□ 2.1
HIRA-202ENST00000340170 ZBTB7CA1YPR0 619 aa28.16■■■□□ 2.1
HIRA-202ENST00000340170 TRIM44Q96DX7 344 aaPredicted RBP28.15■■■□□ 2.1
HIRA-202ENST00000340170 MLECQ14165 292 aa28.15■■■□□ 2.1
HIRA-202ENST00000340170 ATF7IPQ6VMQ6 1270 aa28.14■■■□□ 2.1
HIRA-202ENST00000340170 DIAPH1O60610 1272 aaKnown RBP28.14■■■□□ 2.1
HIRA-202ENST00000340170 HSP90AB1P08238 724 aaKnown RBP28.14■■■□□ 2.1
HIRA-202ENST00000340170 NINLQ9Y2I6 1382 aa28.14■■■□□ 2.09
HIRA-202ENST00000340170 MYOM2P54296 1465 aa28.13■■■□□ 2.09
HIRA-202ENST00000340170 UHRF1BP1LA0JNW5 1464 aa28.13■■■□□ 2.09
HIRA-202ENST00000340170 FBXO31Q5XUX0 539 aaPredicted RBP28.13■■■□□ 2.09
HIRA-202ENST00000340170 TRIM35Q9UPQ4 493 aa28.13■■■□□ 2.09
HIRA-202ENST00000340170 FYB1O15117 783 aa28.13■■■□□ 2.09
HIRA-202ENST00000340170 A0A1W2PP64 1363 aa28.12■■■□□ 2.09
HIRA-202ENST00000340170 TERF2IPQ9NYB0 399 aa28.12■■■□□ 2.09
HIRA-202ENST00000340170 NCLP19338 710 aaKnown RBP28.12■■■□□ 2.09
HIRA-202ENST00000340170 CHMP5Q9NZZ3 219 aa28.12■■■□□ 2.09
HIRA-202ENST00000340170 KIF1BO60333 1816 aa28.11■■■□□ 2.09
HIRA-202ENST00000340170 PRKAR2BP31323 418 aa28.11■■■□□ 2.09
HIRA-202ENST00000340170 DDX19BQ9UMR2 479 aa28.11■■■□□ 2.09
HIRA-202ENST00000340170 HSP90AA2PQ14568 343 aaPredicted RBP28.11■■■□□ 2.09
HIRA-202ENST00000340170 CD109Q6YHK3 1445 aa28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms