RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 KNDC1Q76NI1 1749 aa16.26■□□□□ 0.19
SLC28A1-202ENST00000338602 NALCNQ8IZF0 1738 aa16.25■□□□□ 0.19
SLC28A1-202ENST00000338602 PRAM1Q96QH2 718 aa16.25■□□□□ 0.19
SLC28A1-202ENST00000338602 MST1RQ04912 1400 aa16.24■□□□□ 0.19
SLC28A1-202ENST00000338602 BRINP3Q76B58 766 aa16.24■□□□□ 0.19
SLC28A1-202ENST00000338602 DLC1Q96QB1 1528 aa16.23■□□□□ 0.19
SLC28A1-202ENST00000338602 TONSLQ96HA7 1378 aa16.23■□□□□ 0.19
SLC28A1-202ENST00000338602 ADGRB1O14514 1584 aa16.23■□□□□ 0.19
SLC28A1-202ENST00000338602 PLEKHH1Q9ULM0 1364 aa16.23■□□□□ 0.19
SLC28A1-202ENST00000338602 SAFB2Q14151 953 aaKnown RBP eCLIP16.22■□□□□ 0.19
SLC28A1-202ENST00000338602 KIAA1210Q9ULL0 1709 aa16.21■□□□□ 0.19
SLC28A1-202ENST00000338602 C1orf167Q5SNV9 1468 aa16.21■□□□□ 0.19
SLC28A1-202ENST00000338602 CDC42BPGQ6DT37 1551 aa16.21■□□□□ 0.18
SLC28A1-202ENST00000338602 PHLPP1O60346 1717 aa16.18■□□□□ 0.18
SLC28A1-202ENST00000338602 NBPF1Q3BBV0 1214 aa16.18■□□□□ 0.18
SLC28A1-202ENST00000338602 ESCO1Q5FWF5 840 aa16.18■□□□□ 0.18
SLC28A1-202ENST00000338602 CLSPNQ9HAW4 1339 aa16.18■□□□□ 0.18
SLC28A1-202ENST00000338602 JCADQ9P266 1359 aa16.17■□□□□ 0.18
SLC28A1-202ENST00000338602 NUTM2FA1L443 756 aa16.17■□□□□ 0.18
SLC28A1-202ENST00000338602 ORAI2Q96SN7 254 aa16.17■□□□□ 0.18
SLC28A1-202ENST00000338602 AHDC1Q5TGY3 1603 aaPredicted RBP16.17■□□□□ 0.18
SLC28A1-202ENST00000338602 EIF3AQ14152 1382 aaKnown RBP16.16■□□□□ 0.18
SLC28A1-202ENST00000338602 MINK1Q8N4C8 1332 aaPredicted RBP16.16■□□□□ 0.18
SLC28A1-202ENST00000338602 UPF1Q92900 1129 aaKnown RBP eCLIP16.15■□□□□ 0.18
SLC28A1-202ENST00000338602 LRRC59Q96AG4 307 aaKnown RBP16.15■□□□□ 0.18
SLC28A1-202ENST00000338602 ROCK2O75116 1388 aaKnown RBP16.15■□□□□ 0.18
SLC28A1-202ENST00000338602 HIRIP3Q9BW71 556 aaPredicted RBP16.13■□□□□ 0.17
SLC28A1-202ENST00000338602 NPHP3Q7Z494 1330 aa16.13■□□□□ 0.17
SLC28A1-202ENST00000338602 SRCAPQ6ZRS2 3230 aa16.13■□□□□ 0.17
SLC28A1-202ENST00000338602 WASLO00401 505 aaPredicted RBP16.13■□□□□ 0.17
SLC28A1-202ENST00000338602 CCER1Q8TC90 406 aaPredicted RBP16.13■□□□□ 0.17
SLC28A1-202ENST00000338602 TIMELESSQ9UNS1 1208 aa16.12■□□□□ 0.17
SLC28A1-202ENST00000338602 COL16A1Q07092 1604 aaPredicted RBP16.12■□□□□ 0.17
SLC28A1-202ENST00000338602 CENPJQ9HC77 1338 aaPredicted RBP16.11■□□□□ 0.17
SLC28A1-202ENST00000338602 FMN2Q9NZ56 1722 aa16.11■□□□□ 0.17
SLC28A1-202ENST00000338602 NBPF8Q3BBV2 869 aa16.11■□□□□ 0.17
SLC28A1-202ENST00000338602 DDX17Q92841 729 aaKnown RBP16.11■□□□□ 0.17
SLC28A1-202ENST00000338602 ARHGEF28Q8N1W1 1705 aaKnown RBP16.11■□□□□ 0.17
SLC28A1-202ENST00000338602 SPATA31A6Q5VVP1 1343 aa16.11■□□□□ 0.17
SLC28A1-202ENST00000338602 ANKARQ7Z5J8 1434 aa16.1■□□□□ 0.17
SLC28A1-202ENST00000338602 ADGRB2O60241 1585 aa16.1■□□□□ 0.17
SLC28A1-202ENST00000338602 NHSL1Q5SYE7 1610 aa16.1■□□□□ 0.17
SLC28A1-202ENST00000338602 FOXO3O43524 673 aa16.1■□□□□ 0.17
SLC28A1-202ENST00000338602 PHF8Q9UPP1 1060 aa16.1■□□□□ 0.17
SLC28A1-202ENST00000338602 TRPM1Q7Z4N2 1603 aa16.09■□□□□ 0.17
SLC28A1-202ENST00000338602 CARD11Q9BXL7 1154 aa16.09■□□□□ 0.17
SLC28A1-202ENST00000338602 SOS2Q07890 1332 aaPredicted RBP16.09■□□□□ 0.17
SLC28A1-202ENST00000338602 PSME1Q06323 249 aa16.08■□□□□ 0.16
SLC28A1-202ENST00000338602 CDK19Q9BWU1 502 aa16.07■□□□□ 0.16
SLC28A1-202ENST00000338602 KIF1AQ12756 1690 aa16.06■□□□□ 0.16
SLC28A1-202ENST00000338602 GPRASP1Q5JY77 1395 aa16.06■□□□□ 0.16
SLC28A1-202ENST00000338602 MEX3CQ5U5Q3 659 aaKnown RBP16.06■□□□□ 0.16
SLC28A1-202ENST00000338602 TULP4Q9NRJ4 1543 aa16.06■□□□□ 0.16
SLC28A1-202ENST00000338602 KRT28Q7Z3Y7 464 aa16.05■□□□□ 0.16
SLC28A1-202ENST00000338602 NUDT16Q96DE0 195 aaKnown RBP16.05■□□□□ 0.16
SLC28A1-202ENST00000338602 RALGAPBQ86X10 1494 aa16.05■□□□□ 0.16
SLC28A1-202ENST00000338602 SHPRHQ149N8 1683 aa16.04■□□□□ 0.16
SLC28A1-202ENST00000338602 NUTM2BA6NNL0 878 aaPredicted RBP16.04■□□□□ 0.16
SLC28A1-202ENST00000338602 NUTM2EB1AL46 878 aaPredicted RBP16.04■□□□□ 0.16
SLC28A1-202ENST00000338602 SRPK2P78362 688 aaKnown RBP16.04■□□□□ 0.16
SLC28A1-202ENST00000338602 NUTM2AQ8IVF1 878 aaPredicted RBP16.04■□□□□ 0.16
SLC28A1-202ENST00000338602 PMFBP1Q8TBY8 1022 aa16.04■□□□□ 0.16
SLC28A1-202ENST00000338602 XPCQ01831 940 aaPredicted RBP16.03■□□□□ 0.16
SLC28A1-202ENST00000338602 NGDNQ8NEJ9 315 aaKnown RBP16.03■□□□□ 0.16
SLC28A1-202ENST00000338602 PNPLA6Q8IY17 1366 aa16.03■□□□□ 0.16
SLC28A1-202ENST00000338602 EVC2Q86UK5 1308 aa16.03■□□□□ 0.16
SLC28A1-202ENST00000338602 CCDC61Q9Y6R9 512 aa16.02■□□□□ 0.16
SLC28A1-202ENST00000338602 PRR36Q9H6K5 1346 aa16.02■□□□□ 0.15
SLC28A1-202ENST00000338602 PXDNQ92626 1479 aa16.01■□□□□ 0.15
SLC28A1-202ENST00000338602 RGPD8O14715 1765 aaPredicted RBP16.01■□□□□ 0.15
SLC28A1-202ENST00000338602 SLC24A1O60721 1099 aa16■□□□□ 0.15
SLC28A1-202ENST00000338602 QRICH2Q9H0J4 1663 aa15.99■□□□□ 0.15
SLC28A1-202ENST00000338602 USP32Q8NFA0 1604 aa15.99■□□□□ 0.15
SLC28A1-202ENST00000338602 SPATA31A3Q5VYP0 1347 aa15.99■□□□□ 0.15
SLC28A1-202ENST00000338602 LMOD2Q6P5Q4 547 aa15.99■□□□□ 0.15
SLC28A1-202ENST00000338602 SBNO1A3KN83 1393 aa15.98■□□□□ 0.15
SLC28A1-202ENST00000338602 ATP7BP35670 1465 aa15.98■□□□□ 0.15
SLC28A1-202ENST00000338602 CABP2Q9NPB3 220 aa15.98■□□□□ 0.15
SLC28A1-202ENST00000338602 ITSN1Q15811 1721 aa15.98■□□□□ 0.15
SLC28A1-202ENST00000338602 ZNF772Q68DY9 489 aaPredicted RBP15.97■□□□□ 0.15
SLC28A1-202ENST00000338602 ARHGEF10O15013 1369 aa15.97■□□□□ 0.15
SLC28A1-202ENST00000338602 SBNO2Q9Y2G9 1366 aa15.96■□□□□ 0.15
SLC28A1-202ENST00000338602 PLEKHG3A1L390 1219 aa15.96■□□□□ 0.15
SLC28A1-202ENST00000338602 HAP1P54257 671 aaPredicted RBP15.96■□□□□ 0.15
SLC28A1-202ENST00000338602 LRP6O75581 1613 aa15.96■□□□□ 0.14
SLC28A1-202ENST00000338602 TNS3Q68CZ2 1445 aa15.95■□□□□ 0.14
SLC28A1-202ENST00000338602 PAK3O75914 559 aaPredicted RBP15.95■□□□□ 0.14
SLC28A1-202ENST00000338602 ADAMTS2O95450 1211 aa15.95■□□□□ 0.14
SLC28A1-202ENST00000338602 NGLY1Q96IV0 654 aa15.94■□□□□ 0.14
SLC28A1-202ENST00000338602 PPIP5K1Q6PFW1 1433 aa15.94■□□□□ 0.14
SLC28A1-202ENST00000338602 ACEP12821 1306 aa15.94■□□□□ 0.14
SLC28A1-202ENST00000338602 C8orf37Q96NL8 207 aa15.93■□□□□ 0.14
SLC28A1-202ENST00000338602 POLR3AO14802 1390 aaPredicted RBP15.92■□□□□ 0.14
SLC28A1-202ENST00000338602 ATAD2Q6PL18 1390 aa15.92■□□□□ 0.14
SLC28A1-202ENST00000338602 RXRBP28702 533 aa15.92■□□□□ 0.14
SLC28A1-202ENST00000338602 CABP1Q9NZU7 370 aa15.92■□□□□ 0.14
SLC28A1-202ENST00000338602 COL22A1Q8NFW1 1626 aaPredicted RBP15.92■□□□□ 0.14
SLC28A1-202ENST00000338602 ST20-MTHFSA0A0A6YYL1 179 aa15.91■□□□□ 0.14
SLC28A1-202ENST00000338602 AFF2P51816 1311 aa15.9■□□□□ 0.14
SLC28A1-202ENST00000338602 BRD4O60885 1362 aaPredicted RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms