RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 GTF2E1P29083 439 aaPredicted RBP16.73■□□□□ 0.27
RTN4-202ENST00000337526 NOC3LQ8WTT2 800 aaKnown RBP16.73■□□□□ 0.27
RTN4-202ENST00000337526 WDR97A6NE52 1622 aa16.72■□□□□ 0.27
RTN4-202ENST00000337526 LRRFIP1Q32MZ4 808 aaKnown RBP16.72■□□□□ 0.27
RTN4-202ENST00000337526 HSP90AB4PQ58FF6 505 aa16.72■□□□□ 0.27
RTN4-202ENST00000337526 SLC12A5Q9H2X9 1139 aa16.72■□□□□ 0.27
RTN4-202ENST00000337526 DNMBPQ6XZF7 1577 aa16.72■□□□□ 0.27
RTN4-202ENST00000337526 DDX58O95786 925 aaKnown RBP16.72■□□□□ 0.27
RTN4-202ENST00000337526 TTC5Q8N0Z6 440 aa16.72■□□□□ 0.27
RTN4-202ENST00000337526 BRPF3Q9ULD4 1205 aa16.72■□□□□ 0.27
RTN4-202ENST00000337526 NASPP49321 788 aaPredicted RBP16.71■□□□□ 0.27
RTN4-202ENST00000337526 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.71■□□□□ 0.27
RTN4-202ENST00000337526 ZNF592Q92610 1267 aa16.71■□□□□ 0.27
RTN4-202ENST00000337526 PES1O00541 588 aaKnown RBP16.7■□□□□ 0.26
RTN4-202ENST00000337526 PRKAR2BP31323 418 aa16.7■□□□□ 0.26
RTN4-202ENST00000337526 CPLX1O14810 134 aa16.7■□□□□ 0.26
RTN4-202ENST00000337526 ERC2O15083 957 aa16.69■□□□□ 0.26
RTN4-202ENST00000337526 TSR2Q969E8 191 aaKnown RBP16.69■□□□□ 0.26
RTN4-202ENST00000337526 AKAP17AQ02040 695 aaKnown RBP16.69■□□□□ 0.26
RTN4-202ENST00000337526 TPD52L1Q16890 204 aaPredicted RBP16.69■□□□□ 0.26
RTN4-202ENST00000337526 CCAR2Q8N163 923 aaKnown RBP16.69■□□□□ 0.26
RTN4-202ENST00000337526 SYNE3Q6ZMZ3 975 aa16.69■□□□□ 0.26
RTN4-202ENST00000337526 PRDM2Q13029 1718 aa16.68■□□□□ 0.26
RTN4-202ENST00000337526 UBTFL1P0CB47 393 aaPredicted RBP16.68■□□□□ 0.26
RTN4-202ENST00000337526 RNF214Q8ND24 703 aa16.68■□□□□ 0.26
RTN4-202ENST00000337526 NEK4P51957 841 aa16.67■□□□□ 0.26
RTN4-202ENST00000337526 SNAPC4Q5SXM2 1469 aa16.67■□□□□ 0.26
RTN4-202ENST00000337526 TSR1Q2NL82 804 aaKnown RBP16.66■□□□□ 0.26
RTN4-202ENST00000337526 TWISTNBQ3B726 338 aaPredicted RBP16.66■□□□□ 0.26
RTN4-202ENST00000337526 IL27Q8NEV9 243 aa16.66■□□□□ 0.26
RTN4-202ENST00000337526 GCC1Q96CN9 775 aa16.66■□□□□ 0.26
RTN4-202ENST00000337526 GNAI3P08754 354 aa16.65■□□□□ 0.26
RTN4-202ENST00000337526 CAVIN1Q6NZI2 390 aaKnown RBP16.65■□□□□ 0.26
RTN4-202ENST00000337526 SASS6Q6UVJ0 657 aa16.65■□□□□ 0.26
RTN4-202ENST00000337526 NOB1Q9ULX3 412 aaKnown RBP16.65■□□□□ 0.26
RTN4-202ENST00000337526 APPP05067 770 aa16.65■□□□□ 0.26
RTN4-202ENST00000337526 PSME1Q06323 249 aa16.65■□□□□ 0.26
RTN4-202ENST00000337526 C1orf115Q9H7X2 142 aa16.65■□□□□ 0.26
RTN4-202ENST00000337526 TIAM1Q13009 1591 aa16.65■□□□□ 0.26
RTN4-202ENST00000337526 PRG4Q92954 1404 aaPredicted RBP16.65■□□□□ 0.26
RTN4-202ENST00000337526 TRIM29Q14134 588 aa16.65■□□□□ 0.26
RTN4-202ENST00000337526 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.65■□□□□ 0.26
RTN4-202ENST00000337526 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.64■□□□□ 0.25
RTN4-202ENST00000337526 MARCH6O60337 910 aa16.64■□□□□ 0.25
RTN4-202ENST00000337526 TPM1P09493 284 aa16.64■□□□□ 0.25
RTN4-202ENST00000337526 TRDNQ13061 729 aa16.64■□□□□ 0.25
RTN4-202ENST00000337526 WDR63Q8IWG1 891 aa16.64■□□□□ 0.25
RTN4-202ENST00000337526 C9orf84Q5VXU9 1444 aa16.64■□□□□ 0.25
RTN4-202ENST00000337526 RABEP1Q15276 862 aa16.64■□□□□ 0.25
RTN4-202ENST00000337526 NAIPQ13075 1403 aa16.64■□□□□ 0.25
RTN4-202ENST00000337526 SURF6O75683 361 aaKnown RBP16.64■□□□□ 0.25
RTN4-202ENST00000337526 TMX4Q9H1E5 349 aaPredicted RBP16.64■□□□□ 0.25
RTN4-202ENST00000337526 EFCAB5A4FU69 1503 aa16.63■□□□□ 0.25
RTN4-202ENST00000337526 ATF7IPQ6VMQ6 1270 aa16.63■□□□□ 0.25
RTN4-202ENST00000337526 CLASRPQ8N2M8 674 aaKnown RBP16.63■□□□□ 0.25
RTN4-202ENST00000337526 MBD3O95983 291 aa16.63■□□□□ 0.25
RTN4-202ENST00000337526 C11orf95C9JLR9 678 aaPredicted RBP16.62■□□□□ 0.25
RTN4-202ENST00000337526 CCDC73Q6ZRK6 1079 aa16.62■□□□□ 0.25
RTN4-202ENST00000337526 HOMER1Q86YM7 354 aa16.62■□□□□ 0.25
RTN4-202ENST00000337526 NLRP6P59044 892 aa16.62■□□□□ 0.25
RTN4-202ENST00000337526 PRPF40AO75400 957 aaKnown RBP16.62■□□□□ 0.25
RTN4-202ENST00000337526 R3HCC1Q9Y3T6 440 aaKnown RBP16.62■□□□□ 0.25
RTN4-202ENST00000337526 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.62■□□□□ 0.25
RTN4-202ENST00000337526 EHBP1L1Q8N3D4 1523 aa16.61■□□□□ 0.25
RTN4-202ENST00000337526 MCM2P49736 904 aa16.61■□□□□ 0.25
RTN4-202ENST00000337526 MVPQ14764 893 aaKnown RBP16.61■□□□□ 0.25
RTN4-202ENST00000337526 SCAPERQ9BY12 1400 aa16.61■□□□□ 0.25
RTN4-202ENST00000337526 CT47B1P0C2W7 299 aaPredicted RBP16.61■□□□□ 0.25
RTN4-202ENST00000337526 ARHGAP5Q13017 1502 aa16.61■□□□□ 0.25
RTN4-202ENST00000337526 AIMP1Q12904 312 aaKnown RBP16.61■□□□□ 0.25
RTN4-202ENST00000337526 IFT57Q9NWB7 429 aa16.61■□□□□ 0.25
RTN4-202ENST00000337526 A0A0U1RQG5 324 aaPredicted RBP16.6■□□□□ 0.25
RTN4-202ENST00000337526 PRAM1Q96QH2 718 aa16.6■□□□□ 0.25
RTN4-202ENST00000337526 RIC3Q7Z5B4 369 aa16.6■□□□□ 0.25
RTN4-202ENST00000337526 TROQ12816 1431 aaPredicted RBP16.6■□□□□ 0.25
RTN4-202ENST00000337526 CCDC30Q5VVM6 783 aa16.59■□□□□ 0.25
RTN4-202ENST00000337526 CNTROBQ8N137 903 aa16.59■□□□□ 0.25
RTN4-202ENST00000337526 NEUROD6Q96NK8 337 aa16.59■□□□□ 0.25
RTN4-202ENST00000337526 CCDC39Q9UFE4 941 aa16.59■□□□□ 0.25
RTN4-202ENST00000337526 ERBINQ96RT1 1412 aa16.59■□□□□ 0.25
RTN4-202ENST00000337526 NUTM2GQ5VZR2 741 aa16.59■□□□□ 0.25
RTN4-202ENST00000337526 TOP2BQ02880 1626 aa16.59■□□□□ 0.25
RTN4-202ENST00000337526 NINLQ9Y2I6 1382 aa16.59■□□□□ 0.25
RTN4-202ENST00000337526 EVA1CP58658 441 aa16.58■□□□□ 0.25
RTN4-202ENST00000337526 SLFN5Q08AF3 891 aa16.58■□□□□ 0.25
RTN4-202ENST00000337526 RAPGEF4Q8WZA2 1011 aa16.58■□□□□ 0.25
RTN4-202ENST00000337526 SYNJ2O15056 1496 aa16.58■□□□□ 0.25
RTN4-202ENST00000337526 FBXW7Q969H0 707 aa16.58■□□□□ 0.25
RTN4-202ENST00000337526 FOSBP53539 338 aa16.58■□□□□ 0.24
RTN4-202ENST00000337526 GPS2Q13227 327 aa16.58■□□□□ 0.24
RTN4-202ENST00000337526 ZNF771Q7L3S4 317 aaPredicted RBP16.58■□□□□ 0.24
RTN4-202ENST00000337526 DAPK1P53355 1430 aa16.58■□□□□ 0.24
RTN4-202ENST00000337526 G3V3G9 751 aa16.57■□□□□ 0.24
RTN4-202ENST00000337526 DCAF8Q5TAQ9 597 aa16.57■□□□□ 0.24
RTN4-202ENST00000337526 GAS2L2Q8NHY3 880 aa16.57■□□□□ 0.24
RTN4-202ENST00000337526 MSH5O43196 834 aa16.57■□□□□ 0.24
RTN4-202ENST00000337526 SLC4A2P04920 1241 aa16.57■□□□□ 0.24
RTN4-202ENST00000337526 PSMA5P28066 241 aa16.57■□□□□ 0.24
RTN4-202ENST00000337526 SDF4Q9BRK5 362 aa16.57■□□□□ 0.24
RTN4-202ENST00000337526 IPO7O95373 1038 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms