RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 WASHC2AQ641Q2 1341 aa30.09■■■□□ 2.41
TPM1-204ENST00000334895 XIRP1Q702N8 1843 aaKnown RBP30.08■■■□□ 2.41
TPM1-204ENST00000334895 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.07■■■□□ 2.4
TPM1-204ENST00000334895 KIF7Q2M1P5 1343 aa30.06■■■□□ 2.4
TPM1-204ENST00000334895 TULP4Q9NRJ4 1543 aa30.06■■■□□ 2.4
TPM1-204ENST00000334895 CCDC7Q96M83 1385 aa30.06■■■□□ 2.4
TPM1-204ENST00000334895 MINK1Q8N4C8 1332 aaPredicted RBP30.05■■■□□ 2.4
TPM1-204ENST00000334895 TMF1P82094 1093 aa30.04■■■□□ 2.4
TPM1-204ENST00000334895 NKTRP30414 1462 aaKnown RBP30.04■■■□□ 2.4
TPM1-204ENST00000334895 CERKQ8TCT0 537 aa30.03■■■□□ 2.4
TPM1-204ENST00000334895 LRRC7Q96NW7 1537 aa30.02■■■□□ 2.4
TPM1-204ENST00000334895 ADGRB2O60241 1585 aa30■■■□□ 2.39
TPM1-204ENST00000334895 SLC24A1O60721 1099 aa29.99■■■□□ 2.39
TPM1-204ENST00000334895 NALCNQ8IZF0 1738 aa29.97■■■□□ 2.39
TPM1-204ENST00000334895 RBM33Q96EV2 1170 aaKnown RBP29.96■■■□□ 2.39
TPM1-204ENST00000334895 EVC2Q86UK5 1308 aa29.95■■■□□ 2.39
TPM1-204ENST00000334895 IQSEC2Q5JU85 1478 aa29.94■■■□□ 2.38
TPM1-204ENST00000334895 PROSER2Q86WR7 435 aaPredicted RBP29.93■■■□□ 2.38
TPM1-204ENST00000334895 POLR3GLQ9BT43 218 aa29.93■■■□□ 2.38
TPM1-204ENST00000334895 TMEM94Q12767 1356 aa29.91■■■□□ 2.38
TPM1-204ENST00000334895 CDCA8Q53HL2 280 aa29.91■■■□□ 2.38
TPM1-204ENST00000334895 WASLO00401 505 aaPredicted RBP29.9■■■□□ 2.38
TPM1-204ENST00000334895 CDK19Q9BWU1 502 aa29.9■■■□□ 2.38
TPM1-204ENST00000334895 ADGRL3Q9HAR2 1447 aa29.9■■■□□ 2.38
TPM1-204ENST00000334895 MYOM1P52179 1685 aa29.9■■■□□ 2.38
TPM1-204ENST00000334895 CABP2Q9NPB3 220 aa29.89■■■□□ 2.38
TPM1-204ENST00000334895 DDX10Q13206 875 aaKnown RBP29.87■■■□□ 2.37
TPM1-204ENST00000334895 ILDR1Q86SU0 546 aaPredicted RBP29.87■■■□□ 2.37
TPM1-204ENST00000334895 PUS7Q96PZ0 661 aaKnown RBP29.87■■■□□ 2.37
TPM1-204ENST00000334895 CDC42BPGQ6DT37 1551 aa29.87■■■□□ 2.37
TPM1-204ENST00000334895 SRPK2P78362 688 aaKnown RBP29.85■■■□□ 2.37
TPM1-204ENST00000334895 NCOA3Q9Y6Q9 1424 aa29.84■■■□□ 2.37
TPM1-204ENST00000334895 FMN2Q9NZ56 1722 aa29.83■■■□□ 2.37
TPM1-204ENST00000334895 USP32Q8NFA0 1604 aa29.81■■■□□ 2.36
TPM1-204ENST00000334895 ATP7BP35670 1465 aa29.81■■■□□ 2.36
TPM1-204ENST00000334895 ATAD2Q6PL18 1390 aa29.8■■■□□ 2.36
TPM1-204ENST00000334895 PRR36Q9H6K5 1346 aa29.8■■■□□ 2.36
TPM1-204ENST00000334895 C14orf37Q86TY3 774 aa29.79■■■□□ 2.36
TPM1-204ENST00000334895 TOPAZ1Q8N9V7 1692 aa29.77■■■□□ 2.36
TPM1-204ENST00000334895 NUDT16Q96DE0 195 aaKnown RBP29.75■■■□□ 2.35
TPM1-204ENST00000334895 C19orf44Q9H6X5 657 aa29.75■■■□□ 2.35
TPM1-204ENST00000334895 RGPD8O14715 1765 aaPredicted RBP29.75■■■□□ 2.35
TPM1-204ENST00000334895 NUTM2FA1L443 756 aa29.74■■■□□ 2.35
TPM1-204ENST00000334895 SLC12A5Q9H2X9 1139 aa29.74■■■□□ 2.35
TPM1-204ENST00000334895 MSH6P52701 1360 aa29.74■■■□□ 2.35
TPM1-204ENST00000334895 FBXO41Q8TF61 875 aa29.73■■■□□ 2.35
TPM1-204ENST00000334895 DCCP43146 1447 aa29.72■■■□□ 2.35
TPM1-204ENST00000334895 ANKARQ7Z5J8 1434 aa29.72■■■□□ 2.35
TPM1-204ENST00000334895 UBAP1LF5GYI3 381 aa29.72■■■□□ 2.35
TPM1-204ENST00000334895 TMC1Q8TDI8 760 aa29.72■■■□□ 2.35
TPM1-204ENST00000334895 NINLQ9Y2I6 1382 aa29.71■■■□□ 2.35
TPM1-204ENST00000334895 PPIP5K1Q6PFW1 1433 aa29.7■■■□□ 2.35
TPM1-204ENST00000334895 DIEXFQ68CQ4 756 aaKnown RBP29.7■■■□□ 2.34
TPM1-204ENST00000334895 PANK3Q9H999 370 aa29.7■■■□□ 2.34
TPM1-204ENST00000334895 CCDC61Q9Y6R9 512 aa29.7■■■□□ 2.34
TPM1-204ENST00000334895 CD163L1Q9NR16 1453 aa29.69■■■□□ 2.34
TPM1-204ENST00000334895 ITSN1Q15811 1721 aa29.69■■■□□ 2.34
TPM1-204ENST00000334895 CABP1Q9NZU7 370 aa29.69■■■□□ 2.34
TPM1-204ENST00000334895 TOM1O60784 492 aa29.67■■■□□ 2.34
TPM1-204ENST00000334895 MST1RQ04912 1400 aa29.65■■■□□ 2.34
TPM1-204ENST00000334895 ANKRD36BQ8N2N9 1353 aa29.64■■■□□ 2.34
TPM1-204ENST00000334895 A0A1W2PP64 1363 aa29.63■■■□□ 2.33
TPM1-204ENST00000334895 PER1O15534 1290 aaPredicted RBP29.63■■■□□ 2.33
TPM1-204ENST00000334895 ATF3P18847 181 aa29.63■■■□□ 2.33
TPM1-204ENST00000334895 CARD14Q9BXL6 1004 aa29.62■■■□□ 2.33
TPM1-204ENST00000334895 PLEKHG3A1L390 1219 aa29.61■■■□□ 2.33
TPM1-204ENST00000334895 PIP4K2BP78356 416 aa29.61■■■□□ 2.33
TPM1-204ENST00000334895 C1orf167Q5SNV9 1468 aa29.61■■■□□ 2.33
TPM1-204ENST00000334895 CADPS2Q86UW7 1296 aa29.61■■■□□ 2.33
TPM1-204ENST00000334895 AKAP12Q02952 1782 aa29.61■■■□□ 2.33
TPM1-204ENST00000334895 CPSF1Q10570 1443 aaKnown RBP29.6■■■□□ 2.33
TPM1-204ENST00000334895 SCAF1Q9H7N4 1312 aaKnown RBP29.6■■■□□ 2.33
TPM1-204ENST00000334895 ROBO1Q9Y6N7 1651 aa29.59■■■□□ 2.33
TPM1-204ENST00000334895 TERF2IPQ9NYB0 399 aa29.57■■■□□ 2.32
TPM1-204ENST00000334895 MON2Q7Z3U7 1717 aa29.57■■■□□ 2.32
TPM1-204ENST00000334895 PMFBP1Q8TBY8 1022 aa29.56■■■□□ 2.32
TPM1-204ENST00000334895 NSD3Q9BZ95 1437 aa29.56■■■□□ 2.32
TPM1-204ENST00000334895 POLR3AO14802 1390 aaPredicted RBP29.55■■■□□ 2.32
TPM1-204ENST00000334895 ACEP12821 1306 aa29.55■■■□□ 2.32
TPM1-204ENST00000334895 ORAI2Q96SN7 254 aa29.55■■■□□ 2.32
TPM1-204ENST00000334895 ESCO1Q5FWF5 840 aa29.53■■■□□ 2.32
TPM1-204ENST00000334895 HDGFL2Q7Z4V5 671 aaPredicted RBP29.53■■■□□ 2.32
TPM1-204ENST00000334895 SLAIN2Q9P270 581 aa29.53■■■□□ 2.32
TPM1-204ENST00000334895 PHF8Q9UPP1 1060 aa29.53■■■□□ 2.32
TPM1-204ENST00000334895 KTN1Q86UP2 1357 aaKnown RBP29.51■■■□□ 2.31
TPM1-204ENST00000334895 KIF1AQ12756 1690 aa29.5■■■□□ 2.31
TPM1-204ENST00000334895 NRKQ7Z2Y5 1582 aa29.5■■■□□ 2.31
TPM1-204ENST00000334895 KNSTRNQ9Y448 316 aa29.5■■■□□ 2.31
TPM1-204ENST00000334895 AMER1Q5JTC6 1135 aaPredicted RBP29.49■■■□□ 2.31
TPM1-204ENST00000334895 USP6P35125 1406 aa29.49■■■□□ 2.31
TPM1-204ENST00000334895 NGDNQ8NEJ9 315 aaKnown RBP29.48■■■□□ 2.31
TPM1-204ENST00000334895 ZNF692Q9BU19 519 aaPredicted RBP29.47■■■□□ 2.31
TPM1-204ENST00000334895 EDC4Q6P2E9 1401 aaKnown RBP29.46■■■□□ 2.31
TPM1-204ENST00000334895 SSH2Q76I76 1423 aa29.46■■■□□ 2.31
TPM1-204ENST00000334895 NPC1L1Q9UHC9 1359 aa29.43■■■□□ 2.3
TPM1-204ENST00000334895 BRINP3Q76B58 766 aa29.42■■■□□ 2.3
TPM1-204ENST00000334895 CNGB1Q14028 1251 aaPredicted RBP29.42■■■□□ 2.3
TPM1-204ENST00000334895 KIF20BQ96Q89 1820 aa29.41■■■□□ 2.3
TPM1-204ENST00000334895 CC2D1BQ5T0F9 858 aaKnown RBP29.41■■■□□ 2.3
TPM1-204ENST00000334895 PHLPP1O60346 1717 aa29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms