RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 OSCARQ8IYS5 282 aa17.51■□□□□ 0.39
TUBA1B-201ENST00000332858 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.51■□□□□ 0.39
TUBA1B-201ENST00000332858 MLH3Q9UHC1 1453 aa17.51■□□□□ 0.39
TUBA1B-201ENST00000332858 SAFB2Q14151 953 aaKnown RBP eCLIP17.5■□□□□ 0.39
TUBA1B-201ENST00000332858 SETBP1Q9Y6X0 1596 aa17.5■□□□□ 0.39
TUBA1B-201ENST00000332858 LAS1LQ9Y4W2 734 aaKnown RBP17.49■□□□□ 0.39
TUBA1B-201ENST00000332858 QRICH2Q9H0J4 1663 aa17.48■□□□□ 0.39
TUBA1B-201ENST00000332858 MTHFSP49914 203 aa17.48■□□□□ 0.39
TUBA1B-201ENST00000332858 SIGLEC1Q9BZZ2 1709 aa17.48■□□□□ 0.39
TUBA1B-201ENST00000332858 ABCC3O15438 1527 aa17.48■□□□□ 0.39
TUBA1B-201ENST00000332858 RGS3P49796 1198 aa17.48■□□□□ 0.39
TUBA1B-201ENST00000332858 TULP1O00294 542 aaPredicted RBP17.47■□□□□ 0.39
TUBA1B-201ENST00000332858 HECW2Q9P2P5 1572 aa17.47■□□□□ 0.39
TUBA1B-201ENST00000332858 CABP2Q9NPB3 220 aa17.46■□□□□ 0.39
TUBA1B-201ENST00000332858 TCP11L2Q8N4U5 519 aa17.46■□□□□ 0.39
TUBA1B-201ENST00000332858 IGHDP01880 384 aa17.46■□□□□ 0.39
TUBA1B-201ENST00000332858 ZC3H13Q5T200 1668 aaKnown RBP17.45■□□□□ 0.38
TUBA1B-201ENST00000332858 IDI1Q13907 227 aa17.45■□□□□ 0.38
TUBA1B-201ENST00000332858 PANK1Q8TE04 598 aa17.45■□□□□ 0.38
TUBA1B-201ENST00000332858 SHPRHQ149N8 1683 aa17.45■□□□□ 0.38
TUBA1B-201ENST00000332858 C8orf34Q49A92 452 aa17.44■□□□□ 0.38
TUBA1B-201ENST00000332858 RPGRIP1LQ68CZ1 1315 aa17.44■□□□□ 0.38
TUBA1B-201ENST00000332858 SLC4A3P48751 1232 aa17.44■□□□□ 0.38
TUBA1B-201ENST00000332858 EIF5BO60841 1220 aaKnown RBP17.44■□□□□ 0.38
TUBA1B-201ENST00000332858 STK26Q9P289 416 aa17.44■□□□□ 0.38
TUBA1B-201ENST00000332858 COG6Q9Y2V7 657 aa17.43■□□□□ 0.38
TUBA1B-201ENST00000332858 RUNDC1Q96C34 613 aa17.43■□□□□ 0.38
TUBA1B-201ENST00000332858 TNNQ9UQP3 1299 aa17.42■□□□□ 0.38
TUBA1B-201ENST00000332858 FRAT1Q92837 279 aaPredicted RBP17.42■□□□□ 0.38
TUBA1B-201ENST00000332858 CGNL1Q0VF96 1302 aa17.42■□□□□ 0.38
TUBA1B-201ENST00000332858 VGFO15240 615 aaPredicted RBP17.42■□□□□ 0.38
TUBA1B-201ENST00000332858 TULP4Q9NRJ4 1543 aa17.41■□□□□ 0.38
TUBA1B-201ENST00000332858 GLI2P10070 1586 aa17.41■□□□□ 0.38
TUBA1B-201ENST00000332858 CAMSAP1Q5T5Y3 1602 aa17.41■□□□□ 0.38
TUBA1B-201ENST00000332858 BCL2L13Q9BXK5 485 aa17.4■□□□□ 0.38
TUBA1B-201ENST00000332858 EVC2Q86UK5 1308 aa17.4■□□□□ 0.38
TUBA1B-201ENST00000332858 FAM161AQ3B820 660 aa17.4■□□□□ 0.38
TUBA1B-201ENST00000332858 NGEFQ8N5V2 710 aa17.4■□□□□ 0.38
TUBA1B-201ENST00000332858 PHF23Q9BUL5 403 aaPredicted RBP17.4■□□□□ 0.38
TUBA1B-201ENST00000332858 NEXMIFQ5QGS0 1516 aa17.39■□□□□ 0.38
TUBA1B-201ENST00000332858 RTL5Q5HYW3 569 aaPredicted RBP17.39■□□□□ 0.37
TUBA1B-201ENST00000332858 CFAP74Q9C0B2 1584 aa17.39■□□□□ 0.37
TUBA1B-201ENST00000332858 CANXP27824 592 aaKnown RBP17.38■□□□□ 0.37
TUBA1B-201ENST00000332858 RARSP54136 660 aaKnown RBP17.38■□□□□ 0.37
TUBA1B-201ENST00000332858 YEATS2Q9ULM3 1422 aa17.38■□□□□ 0.37
TUBA1B-201ENST00000332858 PDE3AQ14432 1141 aa17.38■□□□□ 0.37
TUBA1B-201ENST00000332858 ARHGEF28Q8N1W1 1705 aaKnown RBP17.37■□□□□ 0.37
TUBA1B-201ENST00000332858 RLBP1P12271 317 aa17.37■□□□□ 0.37
TUBA1B-201ENST00000332858 PIK3C2BO00750 1634 aa17.37■□□□□ 0.37
TUBA1B-201ENST00000332858 IQSEC2Q5JU85 1478 aa17.37■□□□□ 0.37
TUBA1B-201ENST00000332858 U2AF1L5P0DN76 240 aaPredicted RBP17.37■□□□□ 0.37
TUBA1B-201ENST00000332858 U2AF1Q01081 240 aaKnown RBP eCLIP17.37■□□□□ 0.37
TUBA1B-201ENST00000332858 DIP2CQ9Y2E4 1556 aa17.37■□□□□ 0.37
TUBA1B-201ENST00000332858 NEFMP07197 916 aa17.36■□□□□ 0.37
TUBA1B-201ENST00000332858 ANKRD36BQ8N2N9 1353 aa17.36■□□□□ 0.37
TUBA1B-201ENST00000332858 CLUAP1Q96AJ1 413 aa17.36■□□□□ 0.37
TUBA1B-201ENST00000332858 GGNBP2Q9H3C7 697 aa17.36■□□□□ 0.37
TUBA1B-201ENST00000332858 FBXO31Q5XUX0 539 aaPredicted RBP17.35■□□□□ 0.37
TUBA1B-201ENST00000332858 SRPK2P78362 688 aaKnown RBP17.35■□□□□ 0.37
TUBA1B-201ENST00000332858 KLHL34Q8N239 644 aa17.34■□□□□ 0.37
TUBA1B-201ENST00000332858 CFAP53Q96M91 514 aa17.34■□□□□ 0.37
TUBA1B-201ENST00000332858 A0A1W2PP64 1363 aa17.34■□□□□ 0.37
TUBA1B-201ENST00000332858 MINK1Q8N4C8 1332 aaPredicted RBP17.34■□□□□ 0.37
TUBA1B-201ENST00000332858 NEO1Q92859 1461 aa17.34■□□□□ 0.37
TUBA1B-201ENST00000332858 WDR63Q8IWG1 891 aa17.33■□□□□ 0.37
TUBA1B-201ENST00000332858 MYO5BQ9ULV0 1848 aa17.33■□□□□ 0.36
TUBA1B-201ENST00000332858 USP32Q8NFA0 1604 aa17.32■□□□□ 0.36
TUBA1B-201ENST00000332858 DDRGK1Q96HY6 314 aa17.32■□□□□ 0.36
TUBA1B-201ENST00000332858 PCDHB15Q9Y5E8 787 aa17.32■□□□□ 0.36
TUBA1B-201ENST00000332858 PUS7Q96PZ0 661 aaKnown RBP17.32■□□□□ 0.36
TUBA1B-201ENST00000332858 PRAM1Q96QH2 718 aa17.32■□□□□ 0.36
TUBA1B-201ENST00000332858 TSR2Q969E8 191 aaKnown RBP17.31■□□□□ 0.36
TUBA1B-201ENST00000332858 SLC52A1Q9NWF4 448 aa17.31■□□□□ 0.36
TUBA1B-201ENST00000332858 SEC24BO95487 1268 aa17.3■□□□□ 0.36
TUBA1B-201ENST00000332858 ARHGAP31Q2M1Z3 1444 aa17.3■□□□□ 0.36
TUBA1B-201ENST00000332858 U2SURPO15042 1029 aaKnown RBP17.3■□□□□ 0.36
TUBA1B-201ENST00000332858 CCDC27Q2M243 656 aa17.3■□□□□ 0.36
TUBA1B-201ENST00000332858 FYB1O15117 783 aa17.29■□□□□ 0.36
TUBA1B-201ENST00000332858 RICTORQ6R327 1708 aa17.29■□□□□ 0.36
TUBA1B-201ENST00000332858 ABCC11Q96J66 1382 aa17.28■□□□□ 0.36
TUBA1B-201ENST00000332858 FBLN1P23142 703 aa17.28■□□□□ 0.36
TUBA1B-201ENST00000332858 PLEKHF1Q96S99 279 aa17.27■□□□□ 0.36
TUBA1B-201ENST00000332858 NSD2O96028 1365 aa17.27■□□□□ 0.36
TUBA1B-201ENST00000332858 POGKQ9P215 609 aa17.27■□□□□ 0.35
TUBA1B-201ENST00000332858 PTPRMP28827 1452 aa17.27■□□□□ 0.35
TUBA1B-201ENST00000332858 USP19O94966 1318 aa17.27■□□□□ 0.35
TUBA1B-201ENST00000332858 PPM1GO15355 546 aaPredicted RBP17.26■□□□□ 0.35
TUBA1B-201ENST00000332858 NINLQ9Y2I6 1382 aa17.26■□□□□ 0.35
TUBA1B-201ENST00000332858 ZFYVE9O95405 1425 aa17.26■□□□□ 0.35
TUBA1B-201ENST00000332858 TRIM35Q9UPQ4 493 aa17.26■□□□□ 0.35
TUBA1B-201ENST00000332858 CD163L1Q9NR16 1453 aa17.25■□□□□ 0.35
TUBA1B-201ENST00000332858 CYB5RLQ6IPT4 315 aa17.25■□□□□ 0.35
TUBA1B-201ENST00000332858 TAOK2Q9UL54 1235 aa17.25■□□□□ 0.35
TUBA1B-201ENST00000332858 TMEM131LA2VDJ0 1609 aa17.25■□□□□ 0.35
TUBA1B-201ENST00000332858 TMPOP42166 694 aaKnown RBP17.24■□□□□ 0.35
TUBA1B-201ENST00000332858 MYH16Q9H6N6 1097 aa17.24■□□□□ 0.35
TUBA1B-201ENST00000332858 CABP1Q9NZU7 370 aa17.24■□□□□ 0.35
TUBA1B-201ENST00000332858 YTHDC2Q9H6S0 1430 aaKnown RBP17.24■□□□□ 0.35
TUBA1B-201ENST00000332858 EXOSC9Q06265 439 aaKnown RBP17.24■□□□□ 0.35
TUBA1B-201ENST00000332858 CDK19Q9BWU1 502 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms