RNA–Protein interactions for RNA: ENST00000329516.7

RGPD6-201, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD6, Length 7,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-201ENST00000329516 MYO5AQ9Y4I1 1855 aaKnown RBP4.12□□□□□ -1.75
RGPD6-201ENST00000329516 ARHGAP5Q13017 1502 aa4.12□□□□□ -1.75
RGPD6-201ENST00000329516 TJP1Q07157 1748 aa4.12□□□□□ -1.75
RGPD6-201ENST00000329516 ADAMTS13Q76LX8 1427 aa4.11□□□□□ -1.75
RGPD6-201ENST00000329516 CLSPNQ9HAW4 1339 aa4.11□□□□□ -1.75
RGPD6-201ENST00000329516 TOGARAM1Q9Y4F4 1720 aa4.11□□□□□ -1.75
RGPD6-201ENST00000329516 ZFYVE9O95405 1425 aa4.11□□□□□ -1.75
RGPD6-201ENST00000329516 NKTRP30414 1462 aaKnown RBP4.11□□□□□ -1.75
RGPD6-201ENST00000329516 SCAPERQ9BY12 1400 aa4.11□□□□□ -1.75
RGPD6-201ENST00000329516 PLEKHH2Q8IVE3 1493 aa4.11□□□□□ -1.75
RGPD6-201ENST00000329516 TACC2O95359 2948 aa4.11□□□□□ -1.75
RGPD6-201ENST00000329516 UBR2Q8IWV8 1755 aa4.11□□□□□ -1.75
RGPD6-201ENST00000329516 KDM2BQ8NHM5 1336 aa4.11□□□□□ -1.75
RGPD6-201ENST00000329516 ABCA3Q99758 1704 aa4.1□□□□□ -1.75
RGPD6-201ENST00000329516 PHLPP1O60346 1717 aa4.1□□□□□ -1.75
RGPD6-201ENST00000329516 SPATA31D1Q6ZQQ2 1576 aa4.1□□□□□ -1.75
RGPD6-201ENST00000329516 TROQ12816 1431 aaPredicted RBP4.1□□□□□ -1.75
RGPD6-201ENST00000329516 GTF3C3Q9Y5Q9 886 aa4.1□□□□□ -1.75
RGPD6-201ENST00000329516 CFAP74Q9C0B2 1584 aa4.1□□□□□ -1.75
RGPD6-201ENST00000329516 KDM3BQ7LBC6 1761 aa4.1□□□□□ -1.75
RGPD6-201ENST00000329516 PIK3C2GO75747 1445 aa4.09□□□□□ -1.75
RGPD6-201ENST00000329516 IFT140Q96RY7 1462 aa4.09□□□□□ -1.75
RGPD6-201ENST00000329516 ECM29Q5VYK3 1845 aa4.09□□□□□ -1.75
RGPD6-201ENST00000329516 RGPD5Q99666 1765 aa4.09□□□□□ -1.75
RGPD6-201ENST00000329516 PAPPAQ13219 1627 aa4.09□□□□□ -1.75
RGPD6-201ENST00000329516 CPS1P31327 1500 aa4.09□□□□□ -1.75
RGPD6-201ENST00000329516 PTPRUQ92729 1446 aa4.09□□□□□ -1.76
RGPD6-201ENST00000329516 PKD1L3Q7Z443 1732 aa4.09□□□□□ -1.76
RGPD6-201ENST00000329516 BCL11AQ9H165 835 aa4.09□□□□□ -1.76
RGPD6-201ENST00000329516 CICQ96RK0 1608 aaPredicted RBP4.09□□□□□ -1.76
RGPD6-201ENST00000329516 STRCQ7RTU9 1775 aa4.08□□□□□ -1.76
RGPD6-201ENST00000329516 CARD14Q9BXL6 1004 aa4.08□□□□□ -1.76
RGPD6-201ENST00000329516 MAP2P11137 1827 aaKnown RBP4.08□□□□□ -1.76
RGPD6-201ENST00000329516 NCOA3Q9Y6Q9 1424 aa4.08□□□□□ -1.76
RGPD6-201ENST00000329516 SMG6Q86US8 1419 aaKnown RBP4.08□□□□□ -1.76
RGPD6-201ENST00000329516 TCHHQ07283 1943 aa4.08□□□□□ -1.76
RGPD6-201ENST00000329516 NPATQ14207 1427 aa4.08□□□□□ -1.76
RGPD6-201ENST00000329516 C5P01031 1676 aa4.07□□□□□ -1.76
RGPD6-201ENST00000329516 ANKRD50Q9ULJ7 1429 aa4.07□□□□□ -1.76
RGPD6-201ENST00000329516 MYOM2P54296 1465 aa4.07□□□□□ -1.76
RGPD6-201ENST00000329516 KIF7Q2M1P5 1343 aa4.06□□□□□ -1.76
RGPD6-201ENST00000329516 PAK3O75914 559 aaPredicted RBP4.06□□□□□ -1.76
RGPD6-201ENST00000329516 PNPLA6Q8IY17 1366 aa4.06□□□□□ -1.76
RGPD6-201ENST00000329516 NUP188Q5SRE5 1749 aa4.06□□□□□ -1.76
RGPD6-201ENST00000329516 FMN2Q9NZ56 1722 aa4.06□□□□□ -1.76
RGPD6-201ENST00000329516 KIF2CQ99661 725 aa4.06□□□□□ -1.76
RGPD6-201ENST00000329516 FOXD1Q16676 465 aa4.05□□□□□ -1.76
RGPD6-201ENST00000329516 ANO8Q9HCE9 1232 aaPredicted RBP4.05□□□□□ -1.76
RGPD6-201ENST00000329516 RREB1Q92766 1687 aa4.05□□□□□ -1.76
RGPD6-201ENST00000329516 LAMA4Q16363 1823 aa4.05□□□□□ -1.76
RGPD6-201ENST00000329516 AMER1Q5JTC6 1135 aaPredicted RBP4.05□□□□□ -1.76
RGPD6-201ENST00000329516 ZNF469Q96JG9 3925 aaPredicted RBP4.05□□□□□ -1.76
RGPD6-201ENST00000329516 SCN11AQ9UI33 1791 aa4.04□□□□□ -1.76
RGPD6-201ENST00000329516 APLP2Q06481 763 aa4.04□□□□□ -1.76
RGPD6-201ENST00000329516 PNISRQ8TF01 805 aaKnown RBP4.04□□□□□ -1.76
RGPD6-201ENST00000329516 CCDC7Q96M83 1385 aa4.04□□□□□ -1.76
RGPD6-201ENST00000329516 ITSN1Q15811 1721 aa4.04□□□□□ -1.76
RGPD6-201ENST00000329516 CHD2O14647 1828 aaKnown RBP4.04□□□□□ -1.76
RGPD6-201ENST00000329516 MYH15Q9Y2K3 1946 aa4.03□□□□□ -1.76
RGPD6-201ENST00000329516 LTBP1Q14766 1721 aa4.03□□□□□ -1.76
RGPD6-201ENST00000329516 ANTXR1Q9H6X2 564 aa4.03□□□□□ -1.76
RGPD6-201ENST00000329516 COL5A2P05997 1499 aaPredicted RBP4.02□□□□□ -1.77
RGPD6-201ENST00000329516 SCAF11Q99590 1463 aaKnown RBP4.02□□□□□ -1.77
RGPD6-201ENST00000329516 CPSF1Q10570 1443 aaKnown RBP4.02□□□□□ -1.77
RGPD6-201ENST00000329516 CNTLNQ9NXG0 1405 aa4.02□□□□□ -1.77
RGPD6-201ENST00000329516 AK9Q5TCS8 1911 aa4.02□□□□□ -1.77
RGPD6-201ENST00000329516 PRRC2CQ9Y520 2896 aaKnown RBP4.02□□□□□ -1.77
RGPD6-201ENST00000329516 NIPBLQ6KC79 2804 aaeCLIP4.02□□□□□ -1.77
RGPD6-201ENST00000329516 AKAP11Q9UKA4 1901 aa4.01□□□□□ -1.77
RGPD6-201ENST00000329516 ROBO1Q9Y6N7 1651 aa4.01□□□□□ -1.77
RGPD6-201ENST00000329516 ANKRD36CQ5JPF3 1778 aa4.01□□□□□ -1.77
RGPD6-201ENST00000329516 NFAT5O94916 1531 aa4.01□□□□□ -1.77
RGPD6-201ENST00000329516 CFAP65Q6ZU64 1925 aaKnown RBP4.01□□□□□ -1.77
RGPD6-201ENST00000329516 KIF20BQ96Q89 1820 aa4.01□□□□□ -1.77
RGPD6-201ENST00000329516 TMEM94Q12767 1356 aa4□□□□□ -1.77
RGPD6-201ENST00000329516 NBPF1Q3BBV0 1214 aa4□□□□□ -1.77
RGPD6-201ENST00000329516 NEDD4P46934 1319 aa4□□□□□ -1.77
RGPD6-201ENST00000329516 SBNO2Q9Y2G9 1366 aa4□□□□□ -1.77
RGPD6-201ENST00000329516 TECPR2O15040 1411 aa4□□□□□ -1.77
RGPD6-201ENST00000329516 ARHGAP23Q9P227 1491 aa3.99□□□□□ -1.77
RGPD6-201ENST00000329516 ZNF142P52746 1687 aaPredicted RBP3.99□□□□□ -1.77
RGPD6-201ENST00000329516 PLSCR1O15162 318 aa3.99□□□□□ -1.77
RGPD6-201ENST00000329516 C20orf194Q5TEA3 1177 aa3.99□□□□□ -1.77
RGPD6-201ENST00000329516 SBF2Q86WG5 1849 aa3.99□□□□□ -1.77
RGPD6-201ENST00000329516 DCAF11Q8TEB1 546 aa3.99□□□□□ -1.77
RGPD6-201ENST00000329516 HIRIP3Q9BW71 556 aaPredicted RBP3.99□□□□□ -1.77
RGPD6-201ENST00000329516 MYT1LQ9UL68 1186 aa3.99□□□□□ -1.77
RGPD6-201ENST00000329516 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.99□□□□□ -1.77
RGPD6-201ENST00000329516 MST1RQ04912 1400 aa3.99□□□□□ -1.77
RGPD6-201ENST00000329516 RBBP6Q7Z6E9 1792 aaKnown RBP3.99□□□□□ -1.77
RGPD6-201ENST00000329516 TNNQ9UQP3 1299 aa3.99□□□□□ -1.77
RGPD6-201ENST00000329516 L3MBTL2Q969R5 705 aa3.98□□□□□ -1.77
RGPD6-201ENST00000329516 LAMB4A4D0S4 1761 aa3.98□□□□□ -1.77
RGPD6-201ENST00000329516 MYH14Q7Z406 1995 aaKnown RBP3.98□□□□□ -1.77
RGPD6-201ENST00000329516 WNK3Q9BYP7 1800 aa3.98□□□□□ -1.77
RGPD6-201ENST00000329516 ATP10DQ9P241 1426 aa3.98□□□□□ -1.77
RGPD6-201ENST00000329516 DCAF8L2P0C7V8 631 aa3.98□□□□□ -1.77
RGPD6-201ENST00000329516 SEC24BO95487 1268 aa3.98□□□□□ -1.77
RGPD6-201ENST00000329516 CSMD3Q7Z407 3707 aa3.97□□□□□ -1.77
RGPD6-201ENST00000329516 PRKRIP1Q9H875 184 aaPredicted RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms