RNA–Protein interactions for RNA: ENST00000328736.7

PTPN21-201, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,089 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-201ENST00000328736 PTPRGP23470 1445 aa18.66■□□□□ 0.58
PTPN21-201ENST00000328736 EPS15P42566 896 aa18.66■□□□□ 0.58
PTPN21-201ENST00000328736 KLHL34Q8N239 644 aa18.65■□□□□ 0.58
PTPN21-201ENST00000328736 ATF3P18847 181 aa18.65■□□□□ 0.58
PTPN21-201ENST00000328736 CYB5RLQ6IPT4 315 aa18.65■□□□□ 0.58
PTPN21-201ENST00000328736 TSPYL4Q9UJ04 414 aa18.65■□□□□ 0.58
PTPN21-201ENST00000328736 GNAI1P63096 354 aa18.65■□□□□ 0.58
PTPN21-201ENST00000328736 RIC3Q7Z5B4 369 aa18.64■□□□□ 0.58
PTPN21-201ENST00000328736 RDXP35241 583 aaKnown RBP18.64■□□□□ 0.57
PTPN21-201ENST00000328736 VPS37CA5D8V6 355 aaPredicted RBP18.64■□□□□ 0.57
PTPN21-201ENST00000328736 NINLQ9Y2I6 1382 aa18.64■□□□□ 0.57
PTPN21-201ENST00000328736 ZNF771Q7L3S4 317 aaPredicted RBP18.63■□□□□ 0.57
PTPN21-201ENST00000328736 FGD5Q6ZNL6 1462 aa18.63■□□□□ 0.57
PTPN21-201ENST00000328736 HMOX1P09601 288 aa18.63■□□□□ 0.57
PTPN21-201ENST00000328736 OLFM4Q6UX06 510 aa18.63■□□□□ 0.57
PTPN21-201ENST00000328736 CCDC27Q2M243 656 aa18.63■□□□□ 0.57
PTPN21-201ENST00000328736 SAMD1Q6SPF0 538 aaPredicted RBP18.63■□□□□ 0.57
PTPN21-201ENST00000328736 NUCB2P80303 420 aa18.62■□□□□ 0.57
PTPN21-201ENST00000328736 CCDC173Q0VFZ6 552 aa18.62■□□□□ 0.57
PTPN21-201ENST00000328736 MIA2Q96PC5 1412 aa18.62■□□□□ 0.57
PTPN21-201ENST00000328736 RUNDC1Q96C34 613 aa18.62■□□□□ 0.57
PTPN21-201ENST00000328736 WASHC4Q2M389 1173 aa18.62■□□□□ 0.57
PTPN21-201ENST00000328736 GSE1Q14687 1217 aa18.61■□□□□ 0.57
PTPN21-201ENST00000328736 ARGLU1Q9NWB6 273 aaPredicted RBP18.61■□□□□ 0.57
PTPN21-201ENST00000328736 WWC2Q6AWC2 1192 aa18.61■□□□□ 0.57
PTPN21-201ENST00000328736 CHMP5Q9NZZ3 219 aa18.61■□□□□ 0.57
PTPN21-201ENST00000328736 NAT10Q9H0A0 1025 aaKnown RBP18.61■□□□□ 0.57
PTPN21-201ENST00000328736 NEUROD6Q96NK8 337 aa18.61■□□□□ 0.57
PTPN21-201ENST00000328736 KIF7Q2M1P5 1343 aa18.6■□□□□ 0.57
PTPN21-201ENST00000328736 NUTM2GQ5VZR2 741 aa18.6■□□□□ 0.57
PTPN21-201ENST00000328736 HSP90AB2PQ58FF8 381 aa18.6■□□□□ 0.57
PTPN21-201ENST00000328736 FYB1O15117 783 aa18.59■□□□□ 0.57
PTPN21-201ENST00000328736 OFD1O75665 1012 aa18.59■□□□□ 0.57
PTPN21-201ENST00000328736 PSMA5P28066 241 aa18.59■□□□□ 0.57
PTPN21-201ENST00000328736 MYO6Q9UM54 1294 aa18.59■□□□□ 0.57
PTPN21-201ENST00000328736 MNS1Q8NEH6 495 aa18.58■□□□□ 0.57
PTPN21-201ENST00000328736 SART3Q15020 963 aaKnown RBP18.58■□□□□ 0.57
PTPN21-201ENST00000328736 CABP2Q9NPB3 220 aa18.58■□□□□ 0.57
PTPN21-201ENST00000328736 AAMPQ13685 434 aa18.58■□□□□ 0.56
PTPN21-201ENST00000328736 IKQ13123 557 aaPredicted RBP18.57■□□□□ 0.56
PTPN21-201ENST00000328736 ZFYVE27Q5T4F4 411 aa18.57■□□□□ 0.56
PTPN21-201ENST00000328736 TMEM132EQ6IEE7 984 aa18.57■□□□□ 0.56
PTPN21-201ENST00000328736 TBC1D2BQ9UPU7 963 aa18.57■□□□□ 0.56
PTPN21-201ENST00000328736 FOSBP53539 338 aa18.57■□□□□ 0.56
PTPN21-201ENST00000328736 PANK1Q8TE04 598 aa18.57■□□□□ 0.56
PTPN21-201ENST00000328736 KIF21BO75037 1637 aa18.56■□□□□ 0.56
PTPN21-201ENST00000328736 GAPVD1Q14C86 1478 aa18.56■□□□□ 0.56
PTPN21-201ENST00000328736 SLC3A2P08195 630 aaKnown RBP18.56■□□□□ 0.56
PTPN21-201ENST00000328736 IGF1RP08069 1367 aa18.56■□□□□ 0.56
PTPN21-201ENST00000328736 GGNBP2Q9H3C7 697 aa18.56■□□□□ 0.56
PTPN21-201ENST00000328736 UBTFL1P0CB47 393 aaPredicted RBP18.56■□□□□ 0.56
PTPN21-201ENST00000328736 CCDC7Q96M83 1385 aa18.55■□□□□ 0.56
PTPN21-201ENST00000328736 FGD6Q6ZV73 1430 aa18.55■□□□□ 0.56
PTPN21-201ENST00000328736 CNTROBQ8N137 903 aa18.55■□□□□ 0.56
PTPN21-201ENST00000328736 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.55■□□□□ 0.56
PTPN21-201ENST00000328736 TMEM132AQ24JP5 1023 aa18.55■□□□□ 0.56
PTPN21-201ENST00000328736 STAC3Q96MF2 364 aa18.55■□□□□ 0.56
PTPN21-201ENST00000328736 PHF23Q9BUL5 403 aaPredicted RBP18.55■□□□□ 0.56
PTPN21-201ENST00000328736 NLRP2Q9NX02 1062 aa18.54■□□□□ 0.56
PTPN21-201ENST00000328736 AIMP1Q12904 312 aaKnown RBP18.54■□□□□ 0.56
PTPN21-201ENST00000328736 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.54■□□□□ 0.56
PTPN21-201ENST00000328736 KIF6Q6ZMV9 814 aa18.54■□□□□ 0.56
PTPN21-201ENST00000328736 HSP90B2PQ58FF3 399 aa18.53■□□□□ 0.56
PTPN21-201ENST00000328736 IFT57Q9NWB7 429 aa18.53■□□□□ 0.56
PTPN21-201ENST00000328736 AQRO60306 1485 aaKnown RBP eCLIP18.53■□□□□ 0.56
PTPN21-201ENST00000328736 DCTN1Q14203 1278 aa18.53■□□□□ 0.56
PTPN21-201ENST00000328736 NOM1Q5C9Z4 860 aaKnown RBP18.52■□□□□ 0.56
PTPN21-201ENST00000328736 CAGE1Q8TC20 777 aa18.52■□□□□ 0.56
PTPN21-201ENST00000328736 CDC45O75419 566 aa18.52■□□□□ 0.56
PTPN21-201ENST00000328736 CCAR1Q8IX12 1150 aaKnown RBP18.52■□□□□ 0.55
PTPN21-201ENST00000328736 ERCC4Q92889 916 aaPredicted RBP18.52■□□□□ 0.55
PTPN21-201ENST00000328736 CDK5RAP3Q96JB5 506 aa18.52■□□□□ 0.55
PTPN21-201ENST00000328736 CALRP27797 417 aaKnown RBP18.52■□□□□ 0.55
PTPN21-201ENST00000328736 LNPKQ9C0E8 428 aa18.51■□□□□ 0.55
PTPN21-201ENST00000328736 HIP1O00291 1037 aa18.51■□□□□ 0.55
PTPN21-201ENST00000328736 LETM1O95202 739 aaPredicted RBP18.5■□□□□ 0.55
PTPN21-201ENST00000328736 PDILTQ8N807 584 aa18.5■□□□□ 0.55
PTPN21-201ENST00000328736 FSD1Q9BTV5 496 aa18.5■□□□□ 0.55
PTPN21-201ENST00000328736 MYOM3Q5VTT5 1437 aa18.5■□□□□ 0.55
PTPN21-201ENST00000328736 TXLNAP40222 546 aa18.5■□□□□ 0.55
PTPN21-201ENST00000328736 CDCA7LQ96GN5 454 aa18.5■□□□□ 0.55
PTPN21-201ENST00000328736 GPRASP1Q5JY77 1395 aa18.49■□□□□ 0.55
PTPN21-201ENST00000328736 MAGEC2Q9UBF1 373 aaPredicted RBP18.49■□□□□ 0.55
PTPN21-201ENST00000328736 CNTLNQ9NXG0 1405 aa18.49■□□□□ 0.55
PTPN21-201ENST00000328736 OSCARQ8IYS5 282 aa18.49■□□□□ 0.55
PTPN21-201ENST00000328736 ZNF428Q96B54 188 aa18.49■□□□□ 0.55
PTPN21-201ENST00000328736 SMARCE1Q969G3 411 aa18.49■□□□□ 0.55
PTPN21-201ENST00000328736 LRRC9Q6ZRR7 1453 aa18.48■□□□□ 0.55
PTPN21-201ENST00000328736 SYCP1Q15431 976 aa18.48■□□□□ 0.55
PTPN21-201ENST00000328736 CCDC30Q5VVM6 783 aa18.48■□□□□ 0.55
PTPN21-201ENST00000328736 ADAMTS8Q9UP79 889 aa18.48■□□□□ 0.55
PTPN21-201ENST00000328736 MTMR7Q9Y216 660 aa18.48■□□□□ 0.55
PTPN21-201ENST00000328736 SMG6Q86US8 1419 aaKnown RBP18.48■□□□□ 0.55
PTPN21-201ENST00000328736 FILIP1LQ4L180 1135 aa18.48■□□□□ 0.55
PTPN21-201ENST00000328736 SDF4Q9BRK5 362 aa18.48■□□□□ 0.55
PTPN21-201ENST00000328736 PIP4K2AP48426 406 aaPredicted RBP18.47■□□□□ 0.55
PTPN21-201ENST00000328736 PAF1Q8N7H5 531 aa18.47■□□□□ 0.55
PTPN21-201ENST00000328736 C22orf23Q9BZE7 217 aa18.47■□□□□ 0.55
PTPN21-201ENST00000328736 GNAI3P08754 354 aa18.47■□□□□ 0.55
PTPN21-201ENST00000328736 GAS2L2Q8NHY3 880 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms