RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 LTBP4Q8N2S1 1624 aa7.18□□□□□ -1.26
LRIT3-201ENST00000327908 LRRC7Q96NW7 1537 aa7.18□□□□□ -1.26
LRIT3-201ENST00000327908 TOM1O60784 492 aa7.18□□□□□ -1.26
LRIT3-201ENST00000327908 C14orf37Q86TY3 774 aa7.18□□□□□ -1.26
LRIT3-201ENST00000327908 SLC26A8Q96RN1 970 aa7.18□□□□□ -1.26
LRIT3-201ENST00000327908 NBPF8Q3BBV2 869 aa7.18□□□□□ -1.26
LRIT3-201ENST00000327908 PTPRUQ92729 1446 aa7.17□□□□□ -1.26
LRIT3-201ENST00000327908 FMN2Q9NZ56 1722 aa7.17□□□□□ -1.26
LRIT3-201ENST00000327908 ATP7BP35670 1465 aa7.17□□□□□ -1.26
LRIT3-201ENST00000327908 TMEM94Q12767 1356 aa7.16□□□□□ -1.26
LRIT3-201ENST00000327908 PRAM1Q96QH2 718 aa7.16□□□□□ -1.26
LRIT3-201ENST00000327908 ZNF692Q9BU19 519 aaPredicted RBP7.16□□□□□ -1.26
LRIT3-201ENST00000327908 TERF2IPQ9NYB0 399 aa7.16□□□□□ -1.26
LRIT3-201ENST00000327908 WASLO00401 505 aaPredicted RBP7.16□□□□□ -1.26
LRIT3-201ENST00000327908 TRAK1Q9UPV9 953 aa7.16□□□□□ -1.26
LRIT3-201ENST00000327908 PSME1Q06323 249 aa7.15□□□□□ -1.26
LRIT3-201ENST00000327908 HDGFL2Q7Z4V5 671 aaPredicted RBP7.15□□□□□ -1.26
LRIT3-201ENST00000327908 ROBO2Q9HCK4 1378 aa7.15□□□□□ -1.26
LRIT3-201ENST00000327908 NSD2O96028 1365 aa7.15□□□□□ -1.26
LRIT3-201ENST00000327908 WASHC2AQ641Q2 1341 aa7.15□□□□□ -1.27
LRIT3-201ENST00000327908 KTN1Q86UP2 1357 aaKnown RBP7.14□□□□□ -1.27
LRIT3-201ENST00000327908 NUTM2DQ5VT03 806 aaPredicted RBP7.14□□□□□ -1.27
LRIT3-201ENST00000327908 STK26Q9P289 416 aa7.14□□□□□ -1.27
LRIT3-201ENST00000327908 CERKQ8TCT0 537 aa7.14□□□□□ -1.27
LRIT3-201ENST00000327908 NALCNQ8IZF0 1738 aa7.14□□□□□ -1.27
LRIT3-201ENST00000327908 HSPA5P11021 654 aaKnown RBP7.14□□□□□ -1.27
LRIT3-201ENST00000327908 NBPF1Q3BBV0 1214 aa7.13□□□□□ -1.27
LRIT3-201ENST00000327908 CCDC61Q9Y6R9 512 aa7.13□□□□□ -1.27
LRIT3-201ENST00000327908 NPHP3Q7Z494 1330 aa7.13□□□□□ -1.27
LRIT3-201ENST00000327908 TTC21AQ8NDW8 1320 aa7.13□□□□□ -1.27
LRIT3-201ENST00000327908 TMEM132EQ6IEE7 984 aa7.13□□□□□ -1.27
LRIT3-201ENST00000327908 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.13□□□□□ -1.27
LRIT3-201ENST00000327908 TOPAZ1Q8N9V7 1692 aa7.13□□□□□ -1.27
LRIT3-201ENST00000327908 PLEKHG3A1L390 1219 aa7.13□□□□□ -1.27
LRIT3-201ENST00000327908 SBNO1A3KN83 1393 aa7.12□□□□□ -1.27
LRIT3-201ENST00000327908 ZNF335Q9H4Z2 1342 aaPredicted RBP7.12□□□□□ -1.27
LRIT3-201ENST00000327908 SRPK2P78362 688 aaKnown RBP7.12□□□□□ -1.27
LRIT3-201ENST00000327908 AHDC1Q5TGY3 1603 aaPredicted RBP7.12□□□□□ -1.27
LRIT3-201ENST00000327908 USP32Q8NFA0 1604 aa7.12□□□□□ -1.27
LRIT3-201ENST00000327908 NPC1L1Q9UHC9 1359 aa7.12□□□□□ -1.27
LRIT3-201ENST00000327908 ST20-MTHFSA0A0A6YYL1 179 aa7.12□□□□□ -1.27
LRIT3-201ENST00000327908 ARHGEF10O15013 1369 aa7.12□□□□□ -1.27
LRIT3-201ENST00000327908 C1orf167Q5SNV9 1468 aa7.11□□□□□ -1.27
LRIT3-201ENST00000327908 CGNL1Q0VF96 1302 aa7.11□□□□□ -1.27
LRIT3-201ENST00000327908 MST1RQ04912 1400 aa7.11□□□□□ -1.27
LRIT3-201ENST00000327908 ANKRD36BQ8N2N9 1353 aa7.11□□□□□ -1.27
LRIT3-201ENST00000327908 CDK19Q9BWU1 502 aa7.11□□□□□ -1.27
LRIT3-201ENST00000327908 STRCP1A6NGW2 1772 aa7.11□□□□□ -1.27
LRIT3-201ENST00000327908 ZNF316A6NFI3 1004 aaPredicted RBP7.11□□□□□ -1.27
LRIT3-201ENST00000327908 POLR3AO14802 1390 aaPredicted RBP7.11□□□□□ -1.27
LRIT3-201ENST00000327908 EDC4Q6P2E9 1401 aaKnown RBP7.1□□□□□ -1.27
LRIT3-201ENST00000327908 CCDC7Q96M83 1385 aa7.1□□□□□ -1.27
LRIT3-201ENST00000327908 TESK2Q96S53 571 aa7.1□□□□□ -1.27
LRIT3-201ENST00000327908 MINK1Q8N4C8 1332 aaPredicted RBP7.1□□□□□ -1.27
LRIT3-201ENST00000327908 PHF8Q9UPP1 1060 aa7.1□□□□□ -1.27
LRIT3-201ENST00000327908 ABCC6O95255 1503 aa7.1□□□□□ -1.27
LRIT3-201ENST00000327908 NUDT16Q96DE0 195 aaKnown RBP7.1□□□□□ -1.27
LRIT3-201ENST00000327908 SCAF1Q9H7N4 1312 aaKnown RBP7.09□□□□□ -1.27
LRIT3-201ENST00000327908 PPIP5K1Q6PFW1 1433 aa7.09□□□□□ -1.27
LRIT3-201ENST00000327908 NHSL1Q5SYE7 1610 aa7.09□□□□□ -1.27
LRIT3-201ENST00000327908 XIRP1Q702N8 1843 aaKnown RBP7.09□□□□□ -1.27
LRIT3-201ENST00000327908 USP54Q70EL1 1684 aa7.09□□□□□ -1.28
LRIT3-201ENST00000327908 AKAP12Q02952 1782 aa7.08□□□□□ -1.28
LRIT3-201ENST00000327908 SLAIN2Q9P270 581 aa7.08□□□□□ -1.28
LRIT3-201ENST00000327908 NGDNQ8NEJ9 315 aaKnown RBP7.08□□□□□ -1.28
LRIT3-201ENST00000327908 MED1Q15648 1581 aaPredicted RBP7.08□□□□□ -1.28
LRIT3-201ENST00000327908 KIF24Q5T7B8 1368 aa7.08□□□□□ -1.28
LRIT3-201ENST00000327908 PLEKHH1Q9ULM0 1364 aa7.08□□□□□ -1.28
LRIT3-201ENST00000327908 WAPLQ7Z5K2 1190 aa7.07□□□□□ -1.28
LRIT3-201ENST00000327908 MON2Q7Z3U7 1717 aa7.07□□□□□ -1.28
LRIT3-201ENST00000327908 UBAP1LF5GYI3 381 aa7.07□□□□□ -1.28
LRIT3-201ENST00000327908 CPSF1Q10570 1443 aaKnown RBP7.07□□□□□ -1.28
LRIT3-201ENST00000327908 USP31Q70CQ4 1352 aa7.06□□□□□ -1.28
LRIT3-201ENST00000327908 FBXO41Q8TF61 875 aa7.06□□□□□ -1.28
LRIT3-201ENST00000327908 KNSTRNQ9Y448 316 aa7.06□□□□□ -1.28
LRIT3-201ENST00000327908 TNS3Q68CZ2 1445 aa7.06□□□□□ -1.28
LRIT3-201ENST00000327908 LRRC59Q96AG4 307 aaKnown RBP7.06□□□□□ -1.28
LRIT3-201ENST00000327908 USP6P35125 1406 aa7.06□□□□□ -1.28
LRIT3-201ENST00000327908 PLEKHG2Q9H7P9 1386 aa7.06□□□□□ -1.28
LRIT3-201ENST00000327908 KCNH5Q8NCM2 988 aa7.06□□□□□ -1.28
LRIT3-201ENST00000327908 KIF7Q2M1P5 1343 aa7.05□□□□□ -1.28
LRIT3-201ENST00000327908 DISP3Q9P2K9 1392 aa7.05□□□□□ -1.28
LRIT3-201ENST00000327908 ESCO1Q5FWF5 840 aa7.05□□□□□ -1.28
LRIT3-201ENST00000327908 NLRP13Q86W25 1043 aa7.05□□□□□ -1.28
LRIT3-201ENST00000327908 SPATA31A6Q5VVP1 1343 aa7.05□□□□□ -1.28
LRIT3-201ENST00000327908 RALBP1Q15311 655 aa7.05□□□□□ -1.28
LRIT3-201ENST00000327908 ANKRD26Q9UPS8 1709 aa7.04□□□□□ -1.28
LRIT3-201ENST00000327908 JCADQ9P266 1359 aa7.04□□□□□ -1.28
LRIT3-201ENST00000327908 SOS2Q07890 1332 aaPredicted RBP7.04□□□□□ -1.28
LRIT3-201ENST00000327908 TMC1Q8TDI8 760 aa7.04□□□□□ -1.28
LRIT3-201ENST00000327908 ROBO1Q9Y6N7 1651 aa7.04□□□□□ -1.28
LRIT3-201ENST00000327908 COL22A1Q8NFW1 1626 aaPredicted RBP7.04□□□□□ -1.28
LRIT3-201ENST00000327908 SHPRHQ149N8 1683 aa7.04□□□□□ -1.28
LRIT3-201ENST00000327908 RTL1A6NKG5 1358 aa7.04□□□□□ -1.28
LRIT3-201ENST00000327908 MYOM1P52179 1685 aa7.04□□□□□ -1.28
LRIT3-201ENST00000327908 SAFB2Q14151 953 aaKnown RBP eCLIP7.04□□□□□ -1.28
LRIT3-201ENST00000327908 NRKQ7Z2Y5 1582 aa7.03□□□□□ -1.28
LRIT3-201ENST00000327908 PHLPP1O60346 1717 aa7.03□□□□□ -1.28
LRIT3-201ENST00000327908 KIF20BQ96Q89 1820 aa7.03□□□□□ -1.28
LRIT3-201ENST00000327908 CABP2Q9NPB3 220 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms