RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 CCDC146Q8IYE0 955 aa28.22■■■□□ 2.11
LIMS2-201ENST00000324938 ANP32EQ9BTT0 268 aa28.22■■■□□ 2.11
LIMS2-201ENST00000324938 MORC1Q86VD1 984 aa28.22■■■□□ 2.11
LIMS2-201ENST00000324938 PPP6R1Q9UPN7 881 aa28.21■■■□□ 2.11
LIMS2-201ENST00000324938 NGEFQ8N5V2 710 aa28.21■■■□□ 2.11
LIMS2-201ENST00000324938 CGNL1Q0VF96 1302 aa28.2■■■□□ 2.11
LIMS2-201ENST00000324938 NSD2O96028 1365 aa28.2■■■□□ 2.1
LIMS2-201ENST00000324938 SLFN5Q08AF3 891 aa28.19■■■□□ 2.1
LIMS2-201ENST00000324938 SPATA31D1Q6ZQQ2 1576 aa28.19■■■□□ 2.1
LIMS2-201ENST00000324938 ALKQ9UM73 1620 aa28.19■■■□□ 2.1
LIMS2-201ENST00000324938 APAF1O14727 1248 aa28.18■■■□□ 2.1
LIMS2-201ENST00000324938 PLIN1O60240 522 aa28.18■■■□□ 2.1
LIMS2-201ENST00000324938 FBXO31Q5XUX0 539 aaPredicted RBP28.18■■■□□ 2.1
LIMS2-201ENST00000324938 TRMT2AQ8IZ69 625 aaKnown RBP28.18■■■□□ 2.1
LIMS2-201ENST00000324938 NINLQ9Y2I6 1382 aa28.18■■■□□ 2.1
LIMS2-201ENST00000324938 KIF13AQ9H1H9 1805 aa28.17■■■□□ 2.1
LIMS2-201ENST00000324938 YTHDC2Q9H6S0 1430 aaKnown RBP28.16■■■□□ 2.1
LIMS2-201ENST00000324938 ARHGEF40Q8TER5 1519 aa28.16■■■□□ 2.1
LIMS2-201ENST00000324938 MSH5O43196 834 aa28.15■■■□□ 2.1
LIMS2-201ENST00000324938 ANKRD26Q9UPS8 1709 aa28.13■■■□□ 2.09
LIMS2-201ENST00000324938 NKTRP30414 1462 aaKnown RBP28.13■■■□□ 2.09
LIMS2-201ENST00000324938 CRBNQ96SW2 442 aa28.13■■■□□ 2.09
LIMS2-201ENST00000324938 CABP2Q9NPB3 220 aa28.13■■■□□ 2.09
LIMS2-201ENST00000324938 SETD1AO15047 1707 aaKnown RBP28.11■■■□□ 2.09
LIMS2-201ENST00000324938 STK26Q9P289 416 aa28.11■■■□□ 2.09
LIMS2-201ENST00000324938 IQSEC2Q5JU85 1478 aa28.1■■■□□ 2.09
LIMS2-201ENST00000324938 A2ML1A8K2U0 1454 aa28.09■■■□□ 2.09
LIMS2-201ENST00000324938 SAFB2Q14151 953 aaKnown RBP eCLIP28.09■■■□□ 2.09
LIMS2-201ENST00000324938 ATAD2Q6PL18 1390 aa28.09■■■□□ 2.09
LIMS2-201ENST00000324938 E9PSI1 815 aa28.09■■■□□ 2.09
LIMS2-201ENST00000324938 ABCC11Q96J66 1382 aa28.09■■■□□ 2.09
LIMS2-201ENST00000324938 TNNT2P45379 298 aaPredicted RBP28.08■■■□□ 2.09
LIMS2-201ENST00000324938 A0A1W2PP64 1363 aa28.08■■■□□ 2.09
LIMS2-201ENST00000324938 SPINK5Q9NQ38 1064 aaPredicted RBP28.07■■■□□ 2.08
LIMS2-201ENST00000324938 DLC1Q96QB1 1528 aa28.06■■■□□ 2.08
LIMS2-201ENST00000324938 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.06■■■□□ 2.08
LIMS2-201ENST00000324938 MTHFSP49914 203 aa28.05■■■□□ 2.08
LIMS2-201ENST00000324938 C20orf194Q5TEA3 1177 aa28.05■■■□□ 2.08
LIMS2-201ENST00000324938 PRAM1Q96QH2 718 aa28.05■■■□□ 2.08
LIMS2-201ENST00000324938 STAG3Q9UJ98 1225 aa28.05■■■□□ 2.08
LIMS2-201ENST00000324938 SRPK2P78362 688 aaKnown RBP28.04■■■□□ 2.08
LIMS2-201ENST00000324938 CFAP53Q96M91 514 aa28.04■■■□□ 2.08
LIMS2-201ENST00000324938 CD163L1Q9NR16 1453 aa28.03■■■□□ 2.08
LIMS2-201ENST00000324938 RUNDC1Q96C34 613 aa28.03■■■□□ 2.08
LIMS2-201ENST00000324938 SENP3Q9H4L4 574 aaPredicted RBP28.03■■■□□ 2.08
LIMS2-201ENST00000324938 TCERG1O14776 1098 aaKnown RBP28.02■■■□□ 2.08
LIMS2-201ENST00000324938 POGKQ9P215 609 aa28.02■■■□□ 2.08
LIMS2-201ENST00000324938 MED14O60244 1454 aa28.02■■■□□ 2.08
LIMS2-201ENST00000324938 MINK1Q8N4C8 1332 aaPredicted RBP28.01■■■□□ 2.08
LIMS2-201ENST00000324938 RIMS2Q9UQ26 1411 aa28.01■■■□□ 2.07
LIMS2-201ENST00000324938 WWC1Q8IX03 1113 aa28.01■■■□□ 2.07
LIMS2-201ENST00000324938 KIF20BQ96Q89 1820 aa28.01■■■□□ 2.07
LIMS2-201ENST00000324938 DMRT2Q9Y5R5 561 aa28■■■□□ 2.07
LIMS2-201ENST00000324938 NRXN3Q9Y4C0 1643 aa27.98■■■□□ 2.07
LIMS2-201ENST00000324938 ADGRB2O60241 1585 aa27.98■■■□□ 2.07
LIMS2-201ENST00000324938 NLRP1Q9C000 1473 aa27.98■■■□□ 2.07
LIMS2-201ENST00000324938 PHF23Q9BUL5 403 aaPredicted RBP27.97■■■□□ 2.07
LIMS2-201ENST00000324938 TERF2IPQ9NYB0 399 aa27.97■■■□□ 2.07
LIMS2-201ENST00000324938 TCP11L2Q8N4U5 519 aa27.94■■■□□ 2.06
LIMS2-201ENST00000324938 MS4A1P11836 297 aa27.94■■■□□ 2.06
LIMS2-201ENST00000324938 COL3A1P02461 1466 aaPredicted RBP27.93■■■□□ 2.06
LIMS2-201ENST00000324938 MLECQ14165 292 aa27.93■■■□□ 2.06
LIMS2-201ENST00000324938 NCBP3Q53F19 620 aaKnown RBP27.93■■■□□ 2.06
LIMS2-201ENST00000324938 KDM2BQ8NHM5 1336 aa27.92■■■□□ 2.06
LIMS2-201ENST00000324938 CCDC27Q2M243 656 aa27.91■■■□□ 2.06
LIMS2-201ENST00000324938 CDK19Q9BWU1 502 aa27.91■■■□□ 2.06
LIMS2-201ENST00000324938 KNDC1Q76NI1 1749 aa27.91■■■□□ 2.06
LIMS2-201ENST00000324938 WDR63Q8IWG1 891 aa27.89■■■□□ 2.05
LIMS2-201ENST00000324938 ATP7BP35670 1465 aa27.88■■■□□ 2.05
LIMS2-201ENST00000324938 FYB1O15117 783 aa27.88■■■□□ 2.05
LIMS2-201ENST00000324938 BCAR3O75815 825 aa27.88■■■□□ 2.05
LIMS2-201ENST00000324938 HDGFL2Q7Z4V5 671 aaPredicted RBP27.88■■■□□ 2.05
LIMS2-201ENST00000324938 GGNBP2Q9H3C7 697 aa27.88■■■□□ 2.05
LIMS2-201ENST00000324938 RRP7AQ9Y3A4 280 aaKnown RBP27.88■■■□□ 2.05
LIMS2-201ENST00000324938 ZMYM3Q14202 1370 aa27.87■■■□□ 2.05
LIMS2-201ENST00000324938 ERICH6Q7L0X2 663 aa27.87■■■□□ 2.05
LIMS2-201ENST00000324938 CENPQQ7L2Z9 268 aaPredicted RBP27.86■■■□□ 2.05
LIMS2-201ENST00000324938 NEUROD2Q15784 382 aa27.86■■■□□ 2.05
LIMS2-201ENST00000324938 U2AF1L5P0DN76 240 aaPredicted RBP27.85■■■□□ 2.05
LIMS2-201ENST00000324938 U2AF1Q01081 240 aaKnown RBP eCLIP27.85■■■□□ 2.05
LIMS2-201ENST00000324938 ANP32AP39687 249 aaKnown RBP27.85■■■□□ 2.05
LIMS2-201ENST00000324938 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.85■■■□□ 2.05
LIMS2-201ENST00000324938 UBR1Q8IWV7 1749 aa27.83■■■□□ 2.05
LIMS2-201ENST00000324938 ESF1Q9H501 851 aaKnown RBP27.83■■■□□ 2.05
LIMS2-201ENST00000324938 PDE4AP27815 886 aa27.82■■■□□ 2.04
LIMS2-201ENST00000324938 CABP1Q9NZU7 370 aa27.82■■■□□ 2.04
LIMS2-201ENST00000324938 PDE3AQ14432 1141 aa27.81■■■□□ 2.04
LIMS2-201ENST00000324938 BACH2Q9BYV9 841 aa27.81■■■□□ 2.04
LIMS2-201ENST00000324938 WAPLQ7Z5K2 1190 aa27.8■■■□□ 2.04
LIMS2-201ENST00000324938 CDC42BPGQ6DT37 1551 aa27.79■■■□□ 2.04
LIMS2-201ENST00000324938 CPS1P31327 1500 aa27.79■■■□□ 2.04
LIMS2-201ENST00000324938 PNPLA6Q8IY17 1366 aa27.78■■■□□ 2.04
LIMS2-201ENST00000324938 TNRQ92752 1358 aa27.78■■■□□ 2.04
LIMS2-201ENST00000324938 TECPR2O15040 1411 aa27.78■■■□□ 2.04
LIMS2-201ENST00000324938 METP08581 1390 aa27.77■■■□□ 2.04
LIMS2-201ENST00000324938 IPO9Q96P70 1041 aaKnown RBP27.76■■■□□ 2.03
LIMS2-201ENST00000324938 PLEKHF1Q96S99 279 aa27.76■■■□□ 2.03
LIMS2-201ENST00000324938 NOP58Q9Y2X3 529 aaKnown RBP27.76■■■□□ 2.03
LIMS2-201ENST00000324938 FAM135BQ49AJ0 1406 aa27.76■■■□□ 2.03
LIMS2-201ENST00000324938 RARSP54136 660 aaKnown RBP27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms