RNA–Protein interactions for RNA: ENST00000323374.8

SPHK1-201, Transcript of sphingosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene SPHK1, Length 2,138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-201ENST00000323374 CGNL1Q0VF96 1302 aa28.76■■■□□ 2.19
SPHK1-201ENST00000323374 CCDC136Q96JN2 1154 aa28.76■■■□□ 2.19
SPHK1-201ENST00000323374 YTHDC2Q9H6S0 1430 aaKnown RBP28.75■■■□□ 2.19
SPHK1-201ENST00000323374 SAFB2Q14151 953 aaKnown RBP eCLIP28.75■■■□□ 2.19
SPHK1-201ENST00000323374 SENP3Q9H4L4 574 aaPredicted RBP28.75■■■□□ 2.19
SPHK1-201ENST00000323374 CABP2Q9NPB3 220 aa28.75■■■□□ 2.19
SPHK1-201ENST00000323374 PTPRMP28827 1452 aa28.74■■■□□ 2.19
SPHK1-201ENST00000323374 ZNF521Q96K83 1311 aa28.74■■■□□ 2.19
SPHK1-201ENST00000323374 ALKQ9UM73 1620 aa28.73■■■□□ 2.19
SPHK1-201ENST00000323374 NINLQ9Y2I6 1382 aa28.73■■■□□ 2.19
SPHK1-201ENST00000323374 A2ML1A8K2U0 1454 aa28.72■■■□□ 2.19
SPHK1-201ENST00000323374 CCDC146Q8IYE0 955 aa28.7■■■□□ 2.19
SPHK1-201ENST00000323374 GOLGA2Q08379 1002 aa28.7■■■□□ 2.18
SPHK1-201ENST00000323374 PRAM1Q96QH2 718 aa28.7■■■□□ 2.18
SPHK1-201ENST00000323374 POGKQ9P215 609 aa28.7■■■□□ 2.18
SPHK1-201ENST00000323374 NSD2O96028 1365 aa28.69■■■□□ 2.18
SPHK1-201ENST00000323374 SRPK2P78362 688 aaKnown RBP28.69■■■□□ 2.18
SPHK1-201ENST00000323374 ESF1Q9H501 851 aaKnown RBP28.69■■■□□ 2.18
SPHK1-201ENST00000323374 RIMS2Q9UQ26 1411 aa28.67■■■□□ 2.18
SPHK1-201ENST00000323374 ATAD2Q6PL18 1390 aa28.66■■■□□ 2.18
SPHK1-201ENST00000323374 NGEFQ8N5V2 710 aa28.66■■■□□ 2.18
SPHK1-201ENST00000323374 APAF1O14727 1248 aa28.66■■■□□ 2.18
SPHK1-201ENST00000323374 TNNT2P45379 298 aaPredicted RBP28.66■■■□□ 2.18
SPHK1-201ENST00000323374 DUSP27Q5VZP5 1158 aa28.66■■■□□ 2.18
SPHK1-201ENST00000323374 MINK1Q8N4C8 1332 aaPredicted RBP28.65■■■□□ 2.18
SPHK1-201ENST00000323374 ZMYM3Q14202 1370 aa28.64■■■□□ 2.17
SPHK1-201ENST00000323374 EXOC6Q8TAG9 804 aa28.63■■■□□ 2.17
SPHK1-201ENST00000323374 A0A1W2PP64 1363 aa28.61■■■□□ 2.17
SPHK1-201ENST00000323374 SLFN5Q08AF3 891 aa28.61■■■□□ 2.17
SPHK1-201ENST00000323374 ABCC11Q96J66 1382 aa28.59■■■□□ 2.17
SPHK1-201ENST00000323374 CFAP53Q96M91 514 aa28.59■■■□□ 2.17
SPHK1-201ENST00000323374 MTHFSP49914 203 aa28.58■■■□□ 2.17
SPHK1-201ENST00000323374 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.58■■■□□ 2.17
SPHK1-201ENST00000323374 TERF2IPQ9NYB0 399 aa28.58■■■□□ 2.17
SPHK1-201ENST00000323374 DLC1Q96QB1 1528 aa28.58■■■□□ 2.17
SPHK1-201ENST00000323374 SHPRHQ149N8 1683 aa28.58■■■□□ 2.17
SPHK1-201ENST00000323374 TRMT2AQ8IZ69 625 aaKnown RBP28.57■■■□□ 2.16
SPHK1-201ENST00000323374 PLIN1O60240 522 aa28.56■■■□□ 2.16
SPHK1-201ENST00000323374 CDK19Q9BWU1 502 aa28.55■■■□□ 2.16
SPHK1-201ENST00000323374 E9PSI1 815 aa28.53■■■□□ 2.16
SPHK1-201ENST00000323374 SETD1AO15047 1707 aaKnown RBP28.53■■■□□ 2.16
SPHK1-201ENST00000323374 RUNDC1Q96C34 613 aa28.52■■■□□ 2.16
SPHK1-201ENST00000323374 HDGFP51858 240 aaKnown RBP28.51■■■□□ 2.15
SPHK1-201ENST00000323374 CD163L1Q9NR16 1453 aa28.51■■■□□ 2.15
SPHK1-201ENST00000323374 HDGFL2Q7Z4V5 671 aaPredicted RBP28.51■■■□□ 2.15
SPHK1-201ENST00000323374 TNRQ92752 1358 aa28.5■■■□□ 2.15
SPHK1-201ENST00000323374 SPINK5Q9NQ38 1064 aaPredicted RBP28.49■■■□□ 2.15
SPHK1-201ENST00000323374 NKTRP30414 1462 aaKnown RBP28.48■■■□□ 2.15
SPHK1-201ENST00000323374 WAPLQ7Z5K2 1190 aa28.48■■■□□ 2.15
SPHK1-201ENST00000323374 MED14O60244 1454 aa28.47■■■□□ 2.15
SPHK1-201ENST00000323374 NRXN3Q9Y4C0 1643 aa28.47■■■□□ 2.15
SPHK1-201ENST00000323374 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.47■■■□□ 2.15
SPHK1-201ENST00000323374 CRBNQ96SW2 442 aa28.47■■■□□ 2.15
SPHK1-201ENST00000323374 GGNBP2Q9H3C7 697 aa28.47■■■□□ 2.15
SPHK1-201ENST00000323374 WWC1Q8IX03 1113 aa28.46■■■□□ 2.15
SPHK1-201ENST00000323374 CABP1Q9NZU7 370 aa28.46■■■□□ 2.15
SPHK1-201ENST00000323374 FYB1O15117 783 aa28.45■■■□□ 2.15
SPHK1-201ENST00000323374 FANCIQ9NVI1 1328 aa28.44■■■□□ 2.14
SPHK1-201ENST00000323374 IQSEC2Q5JU85 1478 aa28.43■■■□□ 2.14
SPHK1-201ENST00000323374 TCP11L2Q8N4U5 519 aa28.43■■■□□ 2.14
SPHK1-201ENST00000323374 METP08581 1390 aa28.42■■■□□ 2.14
SPHK1-201ENST00000323374 NLRP1Q9C000 1473 aa28.42■■■□□ 2.14
SPHK1-201ENST00000323374 DMRT2Q9Y5R5 561 aa28.42■■■□□ 2.14
SPHK1-201ENST00000323374 ANKRD26Q9UPS8 1709 aa28.41■■■□□ 2.14
SPHK1-201ENST00000323374 C20orf194Q5TEA3 1177 aa28.4■■■□□ 2.14
SPHK1-201ENST00000323374 TMEM2Q9UHN6 1383 aa28.4■■■□□ 2.14
SPHK1-201ENST00000323374 U2AF1L5P0DN76 240 aaPredicted RBP28.39■■■□□ 2.14
SPHK1-201ENST00000323374 U2AF1Q01081 240 aaKnown RBP eCLIP28.39■■■□□ 2.14
SPHK1-201ENST00000323374 NCBP3Q53F19 620 aaKnown RBP28.39■■■□□ 2.13
SPHK1-201ENST00000323374 ATP7BP35670 1465 aa28.39■■■□□ 2.13
SPHK1-201ENST00000323374 NEUROD2Q15784 382 aa28.38■■■□□ 2.13
SPHK1-201ENST00000323374 SIRT1Q96EB6 747 aa28.38■■■□□ 2.13
SPHK1-201ENST00000323374 PHF23Q9BUL5 403 aaPredicted RBP28.38■■■□□ 2.13
SPHK1-201ENST00000323374 MYT1Q01538 1121 aa28.37■■■□□ 2.13
SPHK1-201ENST00000323374 CCDC27Q2M243 656 aa28.37■■■□□ 2.13
SPHK1-201ENST00000323374 RRP7AQ9Y3A4 280 aaKnown RBP28.37■■■□□ 2.13
SPHK1-201ENST00000323374 UBR1Q8IWV7 1749 aa28.36■■■□□ 2.13
SPHK1-201ENST00000323374 WASLO00401 505 aaPredicted RBP28.36■■■□□ 2.13
SPHK1-201ENST00000323374 FAM135BQ49AJ0 1406 aa28.36■■■□□ 2.13
SPHK1-201ENST00000323374 WDR63Q8IWG1 891 aa28.36■■■□□ 2.13
SPHK1-201ENST00000323374 TECPR2O15040 1411 aa28.35■■■□□ 2.13
SPHK1-201ENST00000323374 TXNDC2Q86VQ3 553 aa28.35■■■□□ 2.13
SPHK1-201ENST00000323374 KNDC1Q76NI1 1749 aa28.34■■■□□ 2.13
SPHK1-201ENST00000323374 COL3A1P02461 1466 aaPredicted RBP28.33■■■□□ 2.13
SPHK1-201ENST00000323374 KIF20BQ96Q89 1820 aa28.32■■■□□ 2.12
SPHK1-201ENST00000323374 CPS1P31327 1500 aa28.29■■■□□ 2.12
SPHK1-201ENST00000323374 U2SURPO15042 1029 aaKnown RBP28.29■■■□□ 2.12
SPHK1-201ENST00000323374 BCAR3O75815 825 aa28.29■■■□□ 2.12
SPHK1-201ENST00000323374 TCERG1O14776 1098 aaKnown RBP28.28■■■□□ 2.12
SPHK1-201ENST00000323374 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.28■■■□□ 2.12
SPHK1-201ENST00000323374 ADGRB2O60241 1585 aa28.28■■■□□ 2.12
SPHK1-201ENST00000323374 PPIP5K1Q6PFW1 1433 aa28.28■■■□□ 2.12
SPHK1-201ENST00000323374 CPSF1Q10570 1443 aaKnown RBP28.27■■■□□ 2.12
SPHK1-201ENST00000323374 PNPLA6Q8IY17 1366 aa28.27■■■□□ 2.12
SPHK1-201ENST00000323374 EDC4Q6P2E9 1401 aaKnown RBP28.25■■■□□ 2.11
SPHK1-201ENST00000323374 ADAMTS13Q76LX8 1427 aa28.25■■■□□ 2.11
SPHK1-201ENST00000323374 DIAPH1O60610 1272 aaKnown RBP28.25■■■□□ 2.11
SPHK1-201ENST00000323374 NUDT16Q96DE0 195 aaKnown RBP28.25■■■□□ 2.11
SPHK1-201ENST00000323374 PLEKHF1Q96S99 279 aa28.25■■■□□ 2.11
SPHK1-201ENST00000323374 PLEKHG1Q9ULL1 1385 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms