RNA–Protein interactions for RNA: ENST00000322887.8

SEC24A-201, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC24A, Length 2,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-201ENST00000322887 STAG3Q9UJ98 1225 aa15.98■□□□□ 0.15
SEC24A-201ENST00000322887 RALGAPBQ86X10 1494 aa15.98■□□□□ 0.15
SEC24A-201ENST00000322887 FRAT2O75474 233 aaPredicted RBP15.97■□□□□ 0.15
SEC24A-201ENST00000322887 HDGFP51858 240 aaKnown RBP15.97■□□□□ 0.15
SEC24A-201ENST00000322887 NRXN1Q9ULB1 1477 aa15.97■□□□□ 0.15
SEC24A-201ENST00000322887 KTN1Q86UP2 1357 aaKnown RBP15.97■□□□□ 0.15
SEC24A-201ENST00000322887 DISP3Q9P2K9 1392 aa15.97■□□□□ 0.15
SEC24A-201ENST00000322887 ADAMTS8Q9UP79 889 aa15.97■□□□□ 0.15
SEC24A-201ENST00000322887 PLPPR3Q6T4P5 718 aa15.96■□□□□ 0.15
SEC24A-201ENST00000322887 PPLO60437 1756 aa15.96■□□□□ 0.15
SEC24A-201ENST00000322887 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.96■□□□□ 0.15
SEC24A-201ENST00000322887 CHGAP10645 457 aaKnown RBP15.96■□□□□ 0.14
SEC24A-201ENST00000322887 GSE1Q14687 1217 aa15.96■□□□□ 0.14
SEC24A-201ENST00000322887 MYO5BQ9ULV0 1848 aa15.95■□□□□ 0.14
SEC24A-201ENST00000322887 RIMS2Q9UQ26 1411 aa15.95■□□□□ 0.14
SEC24A-201ENST00000322887 VGFO15240 615 aaPredicted RBP15.95■□□□□ 0.14
SEC24A-201ENST00000322887 EIF5BO60841 1220 aaKnown RBP15.95■□□□□ 0.14
SEC24A-201ENST00000322887 PARD3Q8TEW0 1356 aa15.94■□□□□ 0.14
SEC24A-201ENST00000322887 MS4A1P11836 297 aa15.94■□□□□ 0.14
SEC24A-201ENST00000322887 CCDC146Q8IYE0 955 aa15.94■□□□□ 0.14
SEC24A-201ENST00000322887 LMTK3Q96Q04 1460 aa15.94■□□□□ 0.14
SEC24A-201ENST00000322887 PPM1GO15355 546 aaPredicted RBP15.93■□□□□ 0.14
SEC24A-201ENST00000322887 ARXQ96QS3 562 aa15.93■□□□□ 0.14
SEC24A-201ENST00000322887 C8orf34Q49A92 452 aa15.92■□□□□ 0.14
SEC24A-201ENST00000322887 PRAG1Q86YV5 1406 aa15.92■□□□□ 0.14
SEC24A-201ENST00000322887 PLEKHH1Q9ULM0 1364 aa15.91■□□□□ 0.14
SEC24A-201ENST00000322887 SPINK5Q9NQ38 1064 aaPredicted RBP15.91■□□□□ 0.14
SEC24A-201ENST00000322887 PIK3C2GO75747 1445 aa15.9■□□□□ 0.14
SEC24A-201ENST00000322887 USP35Q9P2H5 1018 aa15.9■□□□□ 0.14
SEC24A-201ENST00000322887 EID1Q9Y6B2 187 aa15.89■□□□□ 0.13
SEC24A-201ENST00000322887 KDM2BQ8NHM5 1336 aa15.89■□□□□ 0.13
SEC24A-201ENST00000322887 SCAF11Q99590 1463 aaKnown RBP15.89■□□□□ 0.13
SEC24A-201ENST00000322887 DAXXQ9UER7 740 aaPredicted RBP15.89■□□□□ 0.13
SEC24A-201ENST00000322887 PLEKHG1Q9ULL1 1385 aa15.89■□□□□ 0.13
SEC24A-201ENST00000322887 MED14O60244 1454 aa15.88■□□□□ 0.13
SEC24A-201ENST00000322887 SETBP1Q9Y6X0 1596 aa15.88■□□□□ 0.13
SEC24A-201ENST00000322887 TESK2Q96S53 571 aa15.88■□□□□ 0.13
SEC24A-201ENST00000322887 KIAA1210Q9ULL0 1709 aa15.88■□□□□ 0.13
SEC24A-201ENST00000322887 BCAR3O75815 825 aa15.87■□□□□ 0.13
SEC24A-201ENST00000322887 PDE3BQ13370 1112 aa15.87■□□□□ 0.13
SEC24A-201ENST00000322887 ANKLE2Q86XL3 938 aa15.87■□□□□ 0.13
SEC24A-201ENST00000322887 ADGRF5Q8IZF2 1346 aa15.87■□□□□ 0.13
SEC24A-201ENST00000322887 LAMC1P11047 1609 aa15.87■□□□□ 0.13
SEC24A-201ENST00000322887 SEC24BO95487 1268 aa15.87■□□□□ 0.13
SEC24A-201ENST00000322887 TXNDC2Q86VQ3 553 aa15.86■□□□□ 0.13
SEC24A-201ENST00000322887 DMRT2Q9Y5R5 561 aa15.86■□□□□ 0.13
SEC24A-201ENST00000322887 LTKP29376 864 aa15.86■□□□□ 0.13
SEC24A-201ENST00000322887 DUSP27Q5VZP5 1158 aa15.86■□□□□ 0.13
SEC24A-201ENST00000322887 DDRGK1Q96HY6 314 aa15.85■□□□□ 0.13
SEC24A-201ENST00000322887 C14orf93Q9H972 538 aaKnown RBP15.85■□□□□ 0.13
SEC24A-201ENST00000322887 DIP2AQ14689 1571 aa15.84■□□□□ 0.13
SEC24A-201ENST00000322887 GPRASP1Q5JY77 1395 aa15.84■□□□□ 0.13
SEC24A-201ENST00000322887 TRPM1Q7Z4N2 1603 aa15.83■□□□□ 0.13
SEC24A-201ENST00000322887 SLKQ9H2G2 1235 aaPredicted RBP15.83■□□□□ 0.13
SEC24A-201ENST00000322887 FAM161AQ3B820 660 aa15.83■□□□□ 0.12
SEC24A-201ENST00000322887 NRXN3Q9Y4C0 1643 aa15.83■□□□□ 0.12
SEC24A-201ENST00000322887 IGHDP01880 384 aa15.82■□□□□ 0.12
SEC24A-201ENST00000322887 POGKQ9P215 609 aa15.82■□□□□ 0.12
SEC24A-201ENST00000322887 BLMP54132 1417 aaPredicted RBP15.82■□□□□ 0.12
SEC24A-201ENST00000322887 SPRYD3Q8NCJ5 442 aa15.81■□□□□ 0.12
SEC24A-201ENST00000322887 ALKQ9UM73 1620 aa15.81■□□□□ 0.12
SEC24A-201ENST00000322887 ADAMTS13Q76LX8 1427 aa15.81■□□□□ 0.12
SEC24A-201ENST00000322887 NPHP4O75161 1426 aaPredicted RBP15.8■□□□□ 0.12
SEC24A-201ENST00000322887 PPP2R1AP30153 589 aa15.8■□□□□ 0.12
SEC24A-201ENST00000322887 TBX22Q9Y458 520 aa15.8■□□□□ 0.12
SEC24A-201ENST00000322887 WDR43Q15061 677 aaKnown RBP eCLIP15.79■□□□□ 0.12
SEC24A-201ENST00000322887 CENPQQ7L2Z9 268 aaPredicted RBP15.79■□□□□ 0.12
SEC24A-201ENST00000322887 ADGRB1O14514 1584 aa15.79■□□□□ 0.12
SEC24A-201ENST00000322887 SETD1AO15047 1707 aaKnown RBP15.79■□□□□ 0.12
SEC24A-201ENST00000322887 PIK3R4Q99570 1358 aa15.79■□□□□ 0.12
SEC24A-201ENST00000322887 NUTM2DQ5VT03 806 aaPredicted RBP15.79■□□□□ 0.12
SEC24A-201ENST00000322887 APAF1O14727 1248 aa15.78■□□□□ 0.12
SEC24A-201ENST00000322887 IQGAP1P46940 1657 aa15.78■□□□□ 0.12
SEC24A-201ENST00000322887 TNNQ9UQP3 1299 aa15.78■□□□□ 0.12
SEC24A-201ENST00000322887 CFAP70Q5T0N1 1121 aa15.77■□□□□ 0.11
SEC24A-201ENST00000322887 PANK1Q8TE04 598 aa15.77■□□□□ 0.11
SEC24A-201ENST00000322887 HSPA2P54652 639 aa15.76■□□□□ 0.11
SEC24A-201ENST00000322887 STRCQ7RTU9 1775 aa15.76■□□□□ 0.11
SEC24A-201ENST00000322887 GOLGA2Q08379 1002 aa15.76■□□□□ 0.11
SEC24A-201ENST00000322887 NEUROD2Q15784 382 aa15.76■□□□□ 0.11
SEC24A-201ENST00000322887 USP19O94966 1318 aa15.75■□□□□ 0.11
SEC24A-201ENST00000322887 NCKAP5LQ9HCH0 1330 aa15.75■□□□□ 0.11
SEC24A-201ENST00000322887 ASXL1Q8IXJ9 1541 aa15.75■□□□□ 0.11
SEC24A-201ENST00000322887 COG6Q9Y2V7 657 aa15.74■□□□□ 0.11
SEC24A-201ENST00000322887 TMF1P82094 1093 aa15.74■□□□□ 0.11
SEC24A-201ENST00000322887 KNSTRNQ9Y448 316 aa15.74■□□□□ 0.11
SEC24A-201ENST00000322887 AEBP2Q6ZN18 517 aaPredicted RBP15.73■□□□□ 0.11
SEC24A-201ENST00000322887 BCL2L13Q9BXK5 485 aa15.73■□□□□ 0.11
SEC24A-201ENST00000322887 TECPR2O15040 1411 aa15.73■□□□□ 0.11
SEC24A-201ENST00000322887 RRP7AQ9Y3A4 280 aaKnown RBP15.73■□□□□ 0.11
SEC24A-201ENST00000322887 TNNT2P45379 298 aaPredicted RBP15.72■□□□□ 0.11
SEC24A-201ENST00000322887 METP08581 1390 aa15.72■□□□□ 0.11
SEC24A-201ENST00000322887 ABCC11Q96J66 1382 aa15.72■□□□□ 0.11
SEC24A-201ENST00000322887 SLFN5Q08AF3 891 aa15.72■□□□□ 0.11
SEC24A-201ENST00000322887 SIRT1Q96EB6 747 aa15.72■□□□□ 0.11
SEC24A-201ENST00000322887 DLC1Q96QB1 1528 aa15.71■□□□□ 0.11
SEC24A-201ENST00000322887 ZNF521Q96K83 1311 aa15.71■□□□□ 0.11
SEC24A-201ENST00000322887 YTHDC2Q9H6S0 1430 aaKnown RBP15.71■□□□□ 0.11
SEC24A-201ENST00000322887 AMER1Q5JTC6 1135 aaPredicted RBP15.71■□□□□ 0.11
SEC24A-201ENST00000322887 KNDC1Q76NI1 1749 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms