RNA–Protein interactions for RNA: ENST00000321453.11

PDE1C-201, Transcript of phosphodiesterase 1C, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene PDE1C, Length 2,898 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-201ENST00000321453 RAB3GAP1Q15042 981 aa20.75■□□□□ 0.91
PDE1C-201ENST00000321453 ITPRIPQ8IWB1 547 aa20.75■□□□□ 0.91
PDE1C-201ENST00000321453 SHANK2Q9UPX8 1470 aa20.74■□□□□ 0.91
PDE1C-201ENST00000321453 CARD14Q9BXL6 1004 aa20.74■□□□□ 0.91
PDE1C-201ENST00000321453 LNPKQ9C0E8 428 aa20.74■□□□□ 0.91
PDE1C-201ENST00000321453 FBLN2P98095 1184 aa20.73■□□□□ 0.91
PDE1C-201ENST00000321453 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.73■□□□□ 0.91
PDE1C-201ENST00000321453 CDCA8Q53HL2 280 aa20.72■□□□□ 0.91
PDE1C-201ENST00000321453 TSR2Q969E8 191 aaKnown RBP20.72■□□□□ 0.91
PDE1C-201ENST00000321453 UQCRHLA0A096LP55 91 aa20.72■□□□□ 0.91
PDE1C-201ENST00000321453 UQCRHP07919 91 aa20.72■□□□□ 0.91
PDE1C-201ENST00000321453 DZIP1LQ8IYY4 767 aaKnown RBP20.72■□□□□ 0.91
PDE1C-201ENST00000321453 LAMC1P11047 1609 aa20.72■□□□□ 0.91
PDE1C-201ENST00000321453 CCDC141Q6ZP82 1450 aa20.71■□□□□ 0.91
PDE1C-201ENST00000321453 SKOR2Q2VWA4 1001 aaPredicted RBP20.71■□□□□ 0.91
PDE1C-201ENST00000321453 SMC5Q8IY18 1101 aa20.71■□□□□ 0.91
PDE1C-201ENST00000321453 PPP1R9BQ96SB3 815 aa20.71■□□□□ 0.91
PDE1C-201ENST00000321453 ZHX1Q9UKY1 873 aaPredicted RBP20.71■□□□□ 0.91
PDE1C-201ENST00000321453 AK9Q5TCS8 1911 aa20.71■□□□□ 0.91
PDE1C-201ENST00000321453 EIF2AK4Q9P2K8 1649 aaKnown RBP20.7■□□□□ 0.9
PDE1C-201ENST00000321453 NCOA3Q9Y6Q9 1424 aa20.7■□□□□ 0.9
PDE1C-201ENST00000321453 ZKSCAN2Q63HK3 967 aa20.7■□□□□ 0.9
PDE1C-201ENST00000321453 SMC4Q9NTJ3 1288 aa20.69■□□□□ 0.9
PDE1C-201ENST00000321453 CAVIN1Q6NZI2 390 aaKnown RBP20.68■□□□□ 0.9
PDE1C-201ENST00000321453 SYNMO15061 1565 aa20.68■□□□□ 0.9
PDE1C-201ENST00000321453 GAS2L2Q8NHY3 880 aa20.68■□□□□ 0.9
PDE1C-201ENST00000321453 PLXNC1O60486 1568 aa20.68■□□□□ 0.9
PDE1C-201ENST00000321453 ZMYM3Q14202 1370 aa20.67■□□□□ 0.9
PDE1C-201ENST00000321453 RUNDC1Q96C34 613 aa20.67■□□□□ 0.9
PDE1C-201ENST00000321453 MCTP1Q6DN14 999 aa20.67■□□□□ 0.9
PDE1C-201ENST00000321453 GOLGA6L22H0YM25 854 aa20.65■□□□□ 0.9
PDE1C-201ENST00000321453 RBM25P49756 843 aaKnown RBP20.65■□□□□ 0.9
PDE1C-201ENST00000321453 SNX21Q969T3 373 aa20.65■□□□□ 0.9
PDE1C-201ENST00000321453 TRIM27P14373 513 aa20.65■□□□□ 0.9
PDE1C-201ENST00000321453 MORC1Q86VD1 984 aa20.64■□□□□ 0.9
PDE1C-201ENST00000321453 CIZ1Q9ULV3 898 aaPredicted RBP20.64■□□□□ 0.9
PDE1C-201ENST00000321453 AAMPQ13685 434 aa20.64■□□□□ 0.89
PDE1C-201ENST00000321453 KIF2CQ99661 725 aa20.64■□□□□ 0.89
PDE1C-201ENST00000321453 MYOM1P52179 1685 aa20.64■□□□□ 0.89
PDE1C-201ENST00000321453 NUP160Q12769 1436 aa20.64■□□□□ 0.89
PDE1C-201ENST00000321453 MAGI1Q96QZ7 1491 aaPredicted RBP20.64■□□□□ 0.89
PDE1C-201ENST00000321453 BAG4O95429 457 aaKnown RBP20.64■□□□□ 0.89
PDE1C-201ENST00000321453 RBSNQ9H1K0 784 aa20.64■□□□□ 0.89
PDE1C-201ENST00000321453 JARID2Q92833 1246 aaPredicted RBP20.63■□□□□ 0.89
PDE1C-201ENST00000321453 K7ELQ4 463 aaPredicted RBP20.63■□□□□ 0.89
PDE1C-201ENST00000321453 RBM27Q9P2N5 1060 aaKnown RBP20.63■□□□□ 0.89
PDE1C-201ENST00000321453 SYNJ2O15056 1496 aa20.62■□□□□ 0.89
PDE1C-201ENST00000321453 CHAMP1Q96JM3 812 aa20.62■□□□□ 0.89
PDE1C-201ENST00000321453 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.62■□□□□ 0.89
PDE1C-201ENST00000321453 RNF17Q9BXT8 1623 aaKnown RBP20.61■□□□□ 0.89
PDE1C-201ENST00000321453 EXOSC9Q06265 439 aaKnown RBP20.61■□□□□ 0.89
PDE1C-201ENST00000321453 TMEM57Q8N5G2 664 aa20.61■□□□□ 0.89
PDE1C-201ENST00000321453 NGEFQ8N5V2 710 aa20.61■□□□□ 0.89
PDE1C-201ENST00000321453 KLHL40Q2TBA0 621 aa20.6■□□□□ 0.89
PDE1C-201ENST00000321453 MPNDQ8N594 471 aa20.6■□□□□ 0.89
PDE1C-201ENST00000321453 SCAF11Q99590 1463 aaKnown RBP20.6■□□□□ 0.89
PDE1C-201ENST00000321453 PKP1Q13835 747 aa20.6■□□□□ 0.89
PDE1C-201ENST00000321453 ZSCAN23Q3MJ62 389 aa20.6■□□□□ 0.89
PDE1C-201ENST00000321453 PRIM1P49642 420 aaKnown RBP20.59■□□□□ 0.89
PDE1C-201ENST00000321453 SSH1Q8WYL5 1049 aa20.59■□□□□ 0.89
PDE1C-201ENST00000321453 NOB1Q9ULX3 412 aaKnown RBP20.59■□□□□ 0.89
PDE1C-201ENST00000321453 HDAC1Q13547 482 aaPredicted RBP20.59■□□□□ 0.89
PDE1C-201ENST00000321453 NPC1L1Q9UHC9 1359 aa20.59■□□□□ 0.89
PDE1C-201ENST00000321453 WDR63Q8IWG1 891 aa20.58■□□□□ 0.89
PDE1C-201ENST00000321453 TSC1Q92574 1164 aa20.58■□□□□ 0.89
PDE1C-201ENST00000321453 U2AF1L5P0DN76 240 aaPredicted RBP20.58■□□□□ 0.88
PDE1C-201ENST00000321453 U2AF1Q01081 240 aaKnown RBP eCLIP20.58■□□□□ 0.88
PDE1C-201ENST00000321453 C1orf115Q9H7X2 142 aa20.58■□□□□ 0.88
PDE1C-201ENST00000321453 IQGAP1P46940 1657 aa20.58■□□□□ 0.88
PDE1C-201ENST00000321453 MTHFSP49914 203 aa20.57■□□□□ 0.88
PDE1C-201ENST00000321453 CFAP70Q5T0N1 1121 aa20.57■□□□□ 0.88
PDE1C-201ENST00000321453 FOXD4L5Q5VV16 416 aaPredicted RBP20.57■□□□□ 0.88
PDE1C-201ENST00000321453 FOXD4L4Q8WXT5 416 aaPredicted RBP20.57■□□□□ 0.88
PDE1C-201ENST00000321453 DDX19BQ9UMR2 479 aa20.57■□□□□ 0.88
PDE1C-201ENST00000321453 NOL7Q9UMY1 257 aaKnown RBP20.57■□□□□ 0.88
PDE1C-201ENST00000321453 ANKRD45Q5TZF3 282 aa20.56■□□□□ 0.88
PDE1C-201ENST00000321453 RNF214Q8ND24 703 aa20.56■□□□□ 0.88
PDE1C-201ENST00000321453 POLR3AO14802 1390 aaPredicted RBP20.56■□□□□ 0.88
PDE1C-201ENST00000321453 ATP10BO94823 1461 aa20.56■□□□□ 0.88
PDE1C-201ENST00000321453 PTMSP20962 102 aa20.56■□□□□ 0.88
PDE1C-201ENST00000321453 MAP7D2Q96T17 732 aa20.56■□□□□ 0.88
PDE1C-201ENST00000321453 SAMD9LQ8IVG5 1584 aa20.55■□□□□ 0.88
PDE1C-201ENST00000321453 CHMP7Q8WUX9 453 aaPredicted RBP20.55■□□□□ 0.88
PDE1C-201ENST00000321453 TBC1D9Q6ZT07 1266 aa20.55■□□□□ 0.88
PDE1C-201ENST00000321453 CHD1LQ86WJ1 897 aa20.55■□□□□ 0.88
PDE1C-201ENST00000321453 MADDQ8WXG6 1647 aa20.54■□□□□ 0.88
PDE1C-201ENST00000321453 GRIN2AQ12879 1464 aa20.54■□□□□ 0.88
PDE1C-201ENST00000321453 PRPF40AO75400 957 aaKnown RBP20.54■□□□□ 0.88
PDE1C-201ENST00000321453 NUCB1Q02818 461 aa20.54■□□□□ 0.88
PDE1C-201ENST00000321453 ATF7IPQ6VMQ6 1270 aa20.54■□□□□ 0.88
PDE1C-201ENST00000321453 SYCP2Q9BX26 1530 aa20.53■□□□□ 0.88
PDE1C-201ENST00000321453 KDM5AP29375 1690 aaKnown RBP20.53■□□□□ 0.88
PDE1C-201ENST00000321453 SLC12A5Q9H2X9 1139 aa20.53■□□□□ 0.88
PDE1C-201ENST00000321453 JPH4Q96JJ6 628 aa20.52■□□□□ 0.88
PDE1C-201ENST00000321453 PHF23Q9BUL5 403 aaPredicted RBP20.52■□□□□ 0.88
PDE1C-201ENST00000321453 NSD3Q9BZ95 1437 aa20.52■□□□□ 0.88
PDE1C-201ENST00000321453 FAM177BA6PVY3 158 aa20.52■□□□□ 0.88
PDE1C-201ENST00000321453 ZNF500O60304 480 aaPredicted RBP20.52■□□□□ 0.88
PDE1C-201ENST00000321453 ZKSCAN5Q9Y2L8 839 aa20.52■□□□□ 0.88
PDE1C-201ENST00000321453 ARHGEF5Q12774 1597 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms