RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 ATAD2Q6PL18 1390 aa24.14■■□□□ 1.46
RAB39A-201ENST00000320578 MED14O60244 1454 aa24.14■■□□□ 1.46
RAB39A-201ENST00000320578 KNDC1Q76NI1 1749 aa24.14■■□□□ 1.46
RAB39A-201ENST00000320578 INSRP06213 1382 aa24.13■■□□□ 1.45
RAB39A-201ENST00000320578 LTKP29376 864 aa24.13■■□□□ 1.45
RAB39A-201ENST00000320578 CNGB1Q14028 1251 aaPredicted RBP24.13■■□□□ 1.45
RAB39A-201ENST00000320578 TXNDC2Q86VQ3 553 aa24.13■■□□□ 1.45
RAB39A-201ENST00000320578 CARD14Q9BXL6 1004 aa24.13■■□□□ 1.45
RAB39A-201ENST00000320578 GTF3C3Q9Y5Q9 886 aa24.12■■□□□ 1.45
RAB39A-201ENST00000320578 ANKRD36BQ8N2N9 1353 aa24.11■■□□□ 1.45
RAB39A-201ENST00000320578 RIMS1Q86UR5 1692 aaKnown RBP24.11■■□□□ 1.45
RAB39A-201ENST00000320578 SLC12A5Q9H2X9 1139 aa24.1■■□□□ 1.45
RAB39A-201ENST00000320578 USP32Q8NFA0 1604 aa24.1■■□□□ 1.45
RAB39A-201ENST00000320578 CPS1P31327 1500 aa24.09■■□□□ 1.45
RAB39A-201ENST00000320578 ZBED9Q6R2W3 1325 aa24.09■■□□□ 1.45
RAB39A-201ENST00000320578 CEP170BQ9Y4F5 1589 aaPredicted RBP24.08■■□□□ 1.44
RAB39A-201ENST00000320578 SAFB2Q14151 953 aaKnown RBP eCLIP24.07■■□□□ 1.44
RAB39A-201ENST00000320578 SENP3Q9H4L4 574 aaPredicted RBP24.07■■□□□ 1.44
RAB39A-201ENST00000320578 TBX22Q9Y458 520 aa24.07■■□□□ 1.44
RAB39A-201ENST00000320578 CABP2Q9NPB3 220 aa24.07■■□□□ 1.44
RAB39A-201ENST00000320578 MINK1Q8N4C8 1332 aaPredicted RBP24.07■■□□□ 1.44
RAB39A-201ENST00000320578 DIP2AQ14689 1571 aa24.06■■□□□ 1.44
RAB39A-201ENST00000320578 PPP2R1AP30153 589 aa24.06■■□□□ 1.44
RAB39A-201ENST00000320578 SRPK2P78362 688 aaKnown RBP24.05■■□□□ 1.44
RAB39A-201ENST00000320578 NSD3Q9BZ95 1437 aa24.05■■□□□ 1.44
RAB39A-201ENST00000320578 BCANQ96GW7 911 aa24.05■■□□□ 1.44
RAB39A-201ENST00000320578 NSD2O96028 1365 aa24.04■■□□□ 1.44
RAB39A-201ENST00000320578 CDK19Q9BWU1 502 aa24.04■■□□□ 1.44
RAB39A-201ENST00000320578 PLEKHH1Q9ULM0 1364 aa24.03■■□□□ 1.44
RAB39A-201ENST00000320578 ZNF142P52746 1687 aaPredicted RBP24.03■■□□□ 1.44
RAB39A-201ENST00000320578 WAPLQ7Z5K2 1190 aa24.03■■□□□ 1.44
RAB39A-201ENST00000320578 CGNL1Q0VF96 1302 aa24.01■■□□□ 1.43
RAB39A-201ENST00000320578 SETD1BQ9UPS6 1966 aaKnown RBP24■■□□□ 1.43
RAB39A-201ENST00000320578 TERF2IPQ9NYB0 399 aa24■■□□□ 1.43
RAB39A-201ENST00000320578 PLPPR3Q6T4P5 718 aa23.99■■□□□ 1.43
RAB39A-201ENST00000320578 WASLO00401 505 aaPredicted RBP23.98■■□□□ 1.43
RAB39A-201ENST00000320578 PIK3R4Q99570 1358 aa23.98■■□□□ 1.43
RAB39A-201ENST00000320578 CD163L1Q9NR16 1453 aa23.96■■□□□ 1.43
RAB39A-201ENST00000320578 A0A1W2PP64 1363 aa23.96■■□□□ 1.43
RAB39A-201ENST00000320578 ROBO2Q9HCK4 1378 aa23.96■■□□□ 1.43
RAB39A-201ENST00000320578 PTCH1Q13635 1447 aa23.95■■□□□ 1.43
RAB39A-201ENST00000320578 ADGRB2O60241 1585 aa23.95■■□□□ 1.42
RAB39A-201ENST00000320578 ATP7BP35670 1465 aa23.95■■□□□ 1.42
RAB39A-201ENST00000320578 PTPRUQ92729 1446 aa23.95■■□□□ 1.42
RAB39A-201ENST00000320578 HDGFL2Q7Z4V5 671 aaPredicted RBP23.94■■□□□ 1.42
RAB39A-201ENST00000320578 ANKLE2Q86XL3 938 aa23.93■■□□□ 1.42
RAB39A-201ENST00000320578 BLMP54132 1417 aaPredicted RBP23.92■■□□□ 1.42
RAB39A-201ENST00000320578 MORC1Q86VD1 984 aa23.92■■□□□ 1.42
RAB39A-201ENST00000320578 SLC26A8Q96RN1 970 aa23.92■■□□□ 1.42
RAB39A-201ENST00000320578 POLR3AO14802 1390 aaPredicted RBP23.9■■□□□ 1.42
RAB39A-201ENST00000320578 CABP1Q9NZU7 370 aa23.9■■□□□ 1.42
RAB39A-201ENST00000320578 AMOTL2Q9Y2J4 779 aa23.89■■□□□ 1.42
RAB39A-201ENST00000320578 CPSF1Q10570 1443 aaKnown RBP23.87■■□□□ 1.41
RAB39A-201ENST00000320578 CCDC61Q9Y6R9 512 aa23.87■■□□□ 1.41
RAB39A-201ENST00000320578 XRN1Q8IZH2 1706 aaKnown RBP23.86■■□□□ 1.41
RAB39A-201ENST00000320578 NUDT16Q96DE0 195 aaKnown RBP23.86■■□□□ 1.41
RAB39A-201ENST00000320578 WDR43Q15061 677 aaKnown RBP eCLIP23.85■■□□□ 1.41
RAB39A-201ENST00000320578 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.84■■□□□ 1.41
RAB39A-201ENST00000320578 PPIP5K1Q6PFW1 1433 aa23.83■■□□□ 1.41
RAB39A-201ENST00000320578 SMG6Q86US8 1419 aaKnown RBP23.83■■□□□ 1.41
RAB39A-201ENST00000320578 ADAMTS8Q9UP79 889 aa23.82■■□□□ 1.4
RAB39A-201ENST00000320578 FYB1O15117 783 aa23.82■■□□□ 1.4
RAB39A-201ENST00000320578 CDC42BPGQ6DT37 1551 aa23.81■■□□□ 1.4
RAB39A-201ENST00000320578 EDC4Q6P2E9 1401 aaKnown RBP23.81■■□□□ 1.4
RAB39A-201ENST00000320578 PDE3BQ13370 1112 aa23.81■■□□□ 1.4
RAB39A-201ENST00000320578 ZNF692Q9BU19 519 aaPredicted RBP23.81■■□□□ 1.4
RAB39A-201ENST00000320578 ANKRD26Q9UPS8 1709 aa23.8■■□□□ 1.4
RAB39A-201ENST00000320578 PLEKHG3A1L390 1219 aa23.78■■□□□ 1.4
RAB39A-201ENST00000320578 PRR36Q9H6K5 1346 aa23.78■■□□□ 1.4
RAB39A-201ENST00000320578 CFAP53Q96M91 514 aa23.76■■□□□ 1.39
RAB39A-201ENST00000320578 NUDCQ9Y266 331 aa23.76■■□□□ 1.39
RAB39A-201ENST00000320578 NPHP4O75161 1426 aaPredicted RBP23.76■■□□□ 1.39
RAB39A-201ENST00000320578 NGEFQ8N5V2 710 aa23.75■■□□□ 1.39
RAB39A-201ENST00000320578 TOPAZ1Q8N9V7 1692 aa23.75■■□□□ 1.39
RAB39A-201ENST00000320578 KCNA6P17658 529 aa23.74■■□□□ 1.39
RAB39A-201ENST00000320578 MTHFSP49914 203 aa23.74■■□□□ 1.39
RAB39A-201ENST00000320578 GGNBP2Q9H3C7 697 aa23.73■■□□□ 1.39
RAB39A-201ENST00000320578 CHD2O14647 1828 aaKnown RBP23.73■■□□□ 1.39
RAB39A-201ENST00000320578 KIF20BQ96Q89 1820 aa23.73■■□□□ 1.39
RAB39A-201ENST00000320578 NEFLP07196 543 aa23.73■■□□□ 1.39
RAB39A-201ENST00000320578 MON2Q7Z3U7 1717 aa23.72■■□□□ 1.39
RAB39A-201ENST00000320578 ANKARQ7Z5J8 1434 aa23.72■■□□□ 1.39
RAB39A-201ENST00000320578 AKAP12Q02952 1782 aa23.72■■□□□ 1.39
RAB39A-201ENST00000320578 SUPT16HQ9Y5B9 1047 aaKnown RBP23.7■■□□□ 1.39
RAB39A-201ENST00000320578 TNNT2P45379 298 aaPredicted RBP23.7■■□□□ 1.38
RAB39A-201ENST00000320578 ITSN1Q15811 1721 aa23.68■■□□□ 1.38
RAB39A-201ENST00000320578 SHPRHQ149N8 1683 aa23.68■■□□□ 1.38
RAB39A-201ENST00000320578 PNPLA6Q8IY17 1366 aa23.67■■□□□ 1.38
RAB39A-201ENST00000320578 AATKQ6ZMQ8 1374 aa23.66■■□□□ 1.38
RAB39A-201ENST00000320578 NCKAP5LQ9HCH0 1330 aa23.66■■□□□ 1.38
RAB39A-201ENST00000320578 NCBP3Q53F19 620 aaKnown RBP23.66■■□□□ 1.38
RAB39A-201ENST00000320578 ACEP12821 1306 aa23.65■■□□□ 1.38
RAB39A-201ENST00000320578 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.65■■□□□ 1.38
RAB39A-201ENST00000320578 ERICH6BQ5W0A0 696 aa23.64■■□□□ 1.38
RAB39A-201ENST00000320578 ZNF521Q96K83 1311 aa23.64■■□□□ 1.37
RAB39A-201ENST00000320578 COL3A1P02461 1466 aaPredicted RBP23.63■■□□□ 1.37
RAB39A-201ENST00000320578 NWD1Q149M9 1564 aa23.63■■□□□ 1.37
RAB39A-201ENST00000320578 USP6P35125 1406 aa23.63■■□□□ 1.37
RAB39A-201ENST00000320578 SSH2Q76I76 1423 aa23.63■■□□□ 1.37
RAB39A-201ENST00000320578 FKBP8Q14318 412 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms