RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 EVC2Q86UK5 1308 aa10.08□□□□□ -0.8
IFT88-201ENST00000319980 ZFYVE9O95405 1425 aa10.08□□□□□ -0.8
IFT88-201ENST00000319980 STRCQ7RTU9 1775 aa10.08□□□□□ -0.8
IFT88-201ENST00000319980 PDE3BQ13370 1112 aa10.08□□□□□ -0.8
IFT88-201ENST00000319980 B4GALNT3Q6L9W6 998 aa10.08□□□□□ -0.8
IFT88-201ENST00000319980 MYOM1P52179 1685 aa10.07□□□□□ -0.8
IFT88-201ENST00000319980 CABP2Q9NPB3 220 aa10.07□□□□□ -0.8
IFT88-201ENST00000319980 BLMP54132 1417 aaPredicted RBP10.06□□□□□ -0.8
IFT88-201ENST00000319980 TNNT2P45379 298 aaPredicted RBP10.06□□□□□ -0.8
IFT88-201ENST00000319980 RNF123Q5XPI4 1314 aa10.06□□□□□ -0.8
IFT88-201ENST00000319980 MYO3AQ8NEV4 1616 aa10.06□□□□□ -0.8
IFT88-201ENST00000319980 INSRP06213 1382 aa10.06□□□□□ -0.8
IFT88-201ENST00000319980 NSD3Q9BZ95 1437 aa10.05□□□□□ -0.8
IFT88-201ENST00000319980 SRPK2P78362 688 aaKnown RBP10.05□□□□□ -0.8
IFT88-201ENST00000319980 MORC1Q86VD1 984 aa10.05□□□□□ -0.8
IFT88-201ENST00000319980 PRAM1Q96QH2 718 aa10.05□□□□□ -0.8
IFT88-201ENST00000319980 POGKQ9P215 609 aa10.05□□□□□ -0.8
IFT88-201ENST00000319980 RCAN3Q9UKA8 241 aa10.05□□□□□ -0.8
IFT88-201ENST00000319980 TMEM131LA2VDJ0 1609 aa10.05□□□□□ -0.8
IFT88-201ENST00000319980 IQSEC2Q5JU85 1478 aa10.04□□□□□ -0.8
IFT88-201ENST00000319980 MINK1Q8N4C8 1332 aaPredicted RBP10.04□□□□□ -0.8
IFT88-201ENST00000319980 CCDC146Q8IYE0 955 aa10.04□□□□□ -0.8
IFT88-201ENST00000319980 PUS7Q96PZ0 661 aaKnown RBP10.03□□□□□ -0.8
IFT88-201ENST00000319980 ZMYM3Q14202 1370 aa10.03□□□□□ -0.8
IFT88-201ENST00000319980 QRICH2Q9H0J4 1663 aa10.03□□□□□ -0.8
IFT88-201ENST00000319980 CGNL1Q0VF96 1302 aa10.03□□□□□ -0.8
IFT88-201ENST00000319980 PLCB2Q00722 1185 aa10.02□□□□□ -0.81
IFT88-201ENST00000319980 YTHDC2Q9H6S0 1430 aaKnown RBP10.02□□□□□ -0.81
IFT88-201ENST00000319980 CLTCQ00610 1675 aaKnown RBP10.02□□□□□ -0.81
IFT88-201ENST00000319980 RRP1P56182 461 aaKnown RBP10.02□□□□□ -0.81
IFT88-201ENST00000319980 TPRNQ4KMQ1 711 aa10.01□□□□□ -0.81
IFT88-201ENST00000319980 PLEKHH1Q9ULM0 1364 aa10.01□□□□□ -0.81
IFT88-201ENST00000319980 TULP4Q9NRJ4 1543 aa10.01□□□□□ -0.81
IFT88-201ENST00000319980 A2ML1A8K2U0 1454 aa10.01□□□□□ -0.81
IFT88-201ENST00000319980 APAF1O14727 1248 aa10.01□□□□□ -0.81
IFT88-201ENST00000319980 MYO5BQ9ULV0 1848 aa10.01□□□□□ -0.81
IFT88-201ENST00000319980 CCDC136Q96JN2 1154 aa10.01□□□□□ -0.81
IFT88-201ENST00000319980 ANKRD36BQ8N2N9 1353 aa10□□□□□ -0.81
IFT88-201ENST00000319980 RIMS2Q9UQ26 1411 aa10□□□□□ -0.81
IFT88-201ENST00000319980 TULP1O00294 542 aaPredicted RBP10□□□□□ -0.81
IFT88-201ENST00000319980 WAPLQ7Z5K2 1190 aa10□□□□□ -0.81
IFT88-201ENST00000319980 ARHGEF28Q8N1W1 1705 aaKnown RBP9.99□□□□□ -0.81
IFT88-201ENST00000319980 MTHFSP49914 203 aa9.99□□□□□ -0.81
IFT88-201ENST00000319980 GOLGA2Q08379 1002 aa9.99□□□□□ -0.81
IFT88-201ENST00000319980 SPATA31D1Q6ZQQ2 1576 aa9.99□□□□□ -0.81
IFT88-201ENST00000319980 CDK19Q9BWU1 502 aa9.99□□□□□ -0.81
IFT88-201ENST00000319980 ALKQ9UM73 1620 aa9.99□□□□□ -0.81
IFT88-201ENST00000319980 POLR3AO14802 1390 aaPredicted RBP9.98□□□□□ -0.81
IFT88-201ENST00000319980 RBM19Q9Y4C8 960 aaKnown RBP9.98□□□□□ -0.81
IFT88-201ENST00000319980 ZNF521Q96K83 1311 aa9.98□□□□□ -0.81
IFT88-201ENST00000319980 A0A1W2PP64 1363 aa9.98□□□□□ -0.81
IFT88-201ENST00000319980 PLIN1O60240 522 aa9.98□□□□□ -0.81
IFT88-201ENST00000319980 DUSP27Q5VZP5 1158 aa9.98□□□□□ -0.81
IFT88-201ENST00000319980 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.98□□□□□ -0.81
IFT88-201ENST00000319980 TERF2IPQ9NYB0 399 aa9.98□□□□□ -0.81
IFT88-201ENST00000319980 ATAD2Q6PL18 1390 aa9.97□□□□□ -0.81
IFT88-201ENST00000319980 GGNBP2Q9H3C7 697 aa9.97□□□□□ -0.81
IFT88-201ENST00000319980 CABP1Q9NZU7 370 aa9.97□□□□□ -0.81
IFT88-201ENST00000319980 EXOC6Q8TAG9 804 aa9.97□□□□□ -0.81
IFT88-201ENST00000319980 HDGFP51858 240 aaKnown RBP9.96□□□□□ -0.81
IFT88-201ENST00000319980 NINLQ9Y2I6 1382 aa9.96□□□□□ -0.81
IFT88-201ENST00000319980 CFAP53Q96M91 514 aa9.96□□□□□ -0.82
IFT88-201ENST00000319980 TNRQ92752 1358 aa9.96□□□□□ -0.82
IFT88-201ENST00000319980 CEP170BQ9Y4F5 1589 aaPredicted RBP9.96□□□□□ -0.82
IFT88-201ENST00000319980 CEBPAP49715 358 aaPredicted RBP9.96□□□□□ -0.82
IFT88-201ENST00000319980 SLFN5Q08AF3 891 aa9.95□□□□□ -0.82
IFT88-201ENST00000319980 NEUROD2Q15784 382 aa9.95□□□□□ -0.82
IFT88-201ENST00000319980 TXNDC2Q86VQ3 553 aa9.95□□□□□ -0.82
IFT88-201ENST00000319980 SPINK5Q9NQ38 1064 aaPredicted RBP9.95□□□□□ -0.82
IFT88-201ENST00000319980 NSD2O96028 1365 aa9.95□□□□□ -0.82
IFT88-201ENST00000319980 FYB1O15117 783 aa9.95□□□□□ -0.82
IFT88-201ENST00000319980 HAP1P54257 671 aaPredicted RBP9.95□□□□□ -0.82
IFT88-201ENST00000319980 HDGFL2Q7Z4V5 671 aaPredicted RBP9.95□□□□□ -0.82
IFT88-201ENST00000319980 METP08581 1390 aa9.95□□□□□ -0.82
IFT88-201ENST00000319980 LTBP4Q8N2S1 1624 aa9.95□□□□□ -0.82
IFT88-201ENST00000319980 ABCC11Q96J66 1382 aa9.94□□□□□ -0.82
IFT88-201ENST00000319980 RRP7AQ9Y3A4 280 aaKnown RBP9.93□□□□□ -0.82
IFT88-201ENST00000319980 RUNDC1Q96C34 613 aa9.93□□□□□ -0.82
IFT88-201ENST00000319980 DMRT2Q9Y5R5 561 aa9.93□□□□□ -0.82
IFT88-201ENST00000319980 U2AF1L5P0DN76 240 aaPredicted RBP9.93□□□□□ -0.82
IFT88-201ENST00000319980 U2AF1Q01081 240 aaKnown RBP eCLIP9.93□□□□□ -0.82
IFT88-201ENST00000319980 NGEFQ8N5V2 710 aa9.93□□□□□ -0.82
IFT88-201ENST00000319980 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.92□□□□□ -0.82
IFT88-201ENST00000319980 WWC1Q8IX03 1113 aa9.92□□□□□ -0.82
IFT88-201ENST00000319980 TCP11L2Q8N4U5 519 aa9.92□□□□□ -0.82
IFT88-201ENST00000319980 FBXO41Q8TF61 875 aa9.92□□□□□ -0.82
IFT88-201ENST00000319980 TMEM2Q9UHN6 1383 aa9.92□□□□□ -0.82
IFT88-201ENST00000319980 E9PSI1 815 aa9.92□□□□□ -0.82
IFT88-201ENST00000319980 TRMT2AQ8IZ69 625 aaKnown RBP9.92□□□□□ -0.82
IFT88-201ENST00000319980 WASLO00401 505 aaPredicted RBP9.91□□□□□ -0.82
IFT88-201ENST00000319980 NLRP1Q9C000 1473 aa9.91□□□□□ -0.82
IFT88-201ENST00000319980 CD163L1Q9NR16 1453 aa9.91□□□□□ -0.82
IFT88-201ENST00000319980 C20orf194Q5TEA3 1177 aa9.91□□□□□ -0.82
IFT88-201ENST00000319980 USP32Q8NFA0 1604 aa9.91□□□□□ -0.82
IFT88-201ENST00000319980 U2SURPO15042 1029 aaKnown RBP9.91□□□□□ -0.82
IFT88-201ENST00000319980 LTKP29376 864 aa9.91□□□□□ -0.82
IFT88-201ENST00000319980 CRBNQ96SW2 442 aa9.91□□□□□ -0.82
IFT88-201ENST00000319980 MED14O60244 1454 aa9.9□□□□□ -0.82
IFT88-201ENST00000319980 NPM3O75607 178 aaKnown RBP9.9□□□□□ -0.83
IFT88-201ENST00000319980 NCKAP5LQ9HCH0 1330 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms