RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 TTC37Q6PGP7 1564 aa12.19□□□□□ -0.46
RPGR-201ENST00000318842 CDC42BPBQ9Y5S2 1711 aa12.19□□□□□ -0.46
RPGR-201ENST00000318842 ERCC6Q03468 1493 aa12.19□□□□□ -0.46
RPGR-201ENST00000318842 IFT140Q96RY7 1462 aa12.19□□□□□ -0.46
RPGR-201ENST00000318842 MPNDQ8N594 471 aa12.19□□□□□ -0.46
RPGR-201ENST00000318842 SSH1Q8WYL5 1049 aa12.19□□□□□ -0.46
RPGR-201ENST00000318842 ATAD2Q6PL18 1390 aa12.19□□□□□ -0.46
RPGR-201ENST00000318842 NOB1Q9ULX3 412 aaKnown RBP12.19□□□□□ -0.46
RPGR-201ENST00000318842 SHANK2Q9UPX8 1470 aa12.19□□□□□ -0.46
RPGR-201ENST00000318842 TMEM57Q8N5G2 664 aa12.18□□□□□ -0.46
RPGR-201ENST00000318842 DTNBO60941 627 aa12.17□□□□□ -0.46
RPGR-201ENST00000318842 RBM10P98175 930 aaKnown RBP12.17□□□□□ -0.46
RPGR-201ENST00000318842 MVPQ14764 893 aaKnown RBP12.17□□□□□ -0.46
RPGR-201ENST00000318842 DZIP1LQ8IYY4 767 aaKnown RBP12.17□□□□□ -0.46
RPGR-201ENST00000318842 TNPO1Q92973 898 aaKnown RBP12.17□□□□□ -0.46
RPGR-201ENST00000318842 PODXL2Q9NZ53 605 aa12.17□□□□□ -0.46
RPGR-201ENST00000318842 HSP90AA1P07900 732 aaKnown RBP12.16□□□□□ -0.46
RPGR-201ENST00000318842 RUNDC1Q96C34 613 aa12.16□□□□□ -0.46
RPGR-201ENST00000318842 RWDD1Q9H446 243 aaPredicted RBP12.16□□□□□ -0.46
RPGR-201ENST00000318842 GRPEL1Q9HAV7 217 aa12.16□□□□□ -0.46
RPGR-201ENST00000318842 ZMYND15Q9H091 742 aa12.16□□□□□ -0.46
RPGR-201ENST00000318842 CFAP65Q6ZU64 1925 aaKnown RBP12.16□□□□□ -0.46
RPGR-201ENST00000318842 NCLP19338 710 aaKnown RBP12.15□□□□□ -0.46
RPGR-201ENST00000318842 L1TD1Q5T7N2 865 aaKnown RBP12.15□□□□□ -0.46
RPGR-201ENST00000318842 PMFBP1Q8TBY8 1022 aa12.15□□□□□ -0.46
RPGR-201ENST00000318842 FSD2A1L4K1 749 aa12.15□□□□□ -0.46
RPGR-201ENST00000318842 SSFA2P28290 1259 aa12.15□□□□□ -0.46
RPGR-201ENST00000318842 PIK3C2GO75747 1445 aa12.15□□□□□ -0.46
RPGR-201ENST00000318842 SYNJ2O15056 1496 aa12.15□□□□□ -0.47
RPGR-201ENST00000318842 PKP1Q13835 747 aa12.15□□□□□ -0.47
RPGR-201ENST00000318842 FOXD4L6Q3SYB3 417 aaPredicted RBP12.15□□□□□ -0.47
RPGR-201ENST00000318842 FOXD4L3Q6VB84 417 aaPredicted RBP12.15□□□□□ -0.47
RPGR-201ENST00000318842 ERVK-7P63135 1459 aa12.14□□□□□ -0.47
RPGR-201ENST00000318842 SCAF11Q99590 1463 aaKnown RBP12.14□□□□□ -0.47
RPGR-201ENST00000318842 HSP90AB1P08238 724 aaKnown RBP12.14□□□□□ -0.47
RPGR-201ENST00000318842 HSCBQ8IWL3 235 aa12.14□□□□□ -0.47
RPGR-201ENST00000318842 SYNMO15061 1565 aa12.14□□□□□ -0.47
RPGR-201ENST00000318842 ERCC6L2Q5T890 1561 aa12.14□□□□□ -0.47
RPGR-201ENST00000318842 SPAG9O60271 1321 aaKnown RBP12.14□□□□□ -0.47
RPGR-201ENST00000318842 RTEL1-TNFRSF6BF6WH68 1400 aa12.13□□□□□ -0.47
RPGR-201ENST00000318842 HSP90AA2PQ14568 343 aaPredicted RBP12.13□□□□□ -0.47
RPGR-201ENST00000318842 CDCA8Q53HL2 280 aa12.13□□□□□ -0.47
RPGR-201ENST00000318842 ZKSCAN2Q63HK3 967 aa12.13□□□□□ -0.47
RPGR-201ENST00000318842 ZNF692Q9BU19 519 aaPredicted RBP12.13□□□□□ -0.47
RPGR-201ENST00000318842 MYH16Q9H6N6 1097 aa12.13□□□□□ -0.47
RPGR-201ENST00000318842 MYOM1P52179 1685 aa12.13□□□□□ -0.47
RPGR-201ENST00000318842 ANKRD45Q5TZF3 282 aa12.13□□□□□ -0.47
RPGR-201ENST00000318842 CHMP5Q9NZZ3 219 aa12.13□□□□□ -0.47
RPGR-201ENST00000318842 GGT6Q6P531 493 aa12.13□□□□□ -0.47
RPGR-201ENST00000318842 AK9Q5TCS8 1911 aa12.12□□□□□ -0.47
RPGR-201ENST00000318842 ATP10AO60312 1499 aa12.11□□□□□ -0.47
RPGR-201ENST00000318842 ESPNB1AK53 854 aa12.11□□□□□ -0.47
RPGR-201ENST00000318842 HMOX1P09601 288 aa12.11□□□□□ -0.47
RPGR-201ENST00000318842 GAS2L2Q8NHY3 880 aa12.11□□□□□ -0.47
RPGR-201ENST00000318842 JARID2Q92833 1246 aaPredicted RBP12.11□□□□□ -0.47
RPGR-201ENST00000318842 MADDQ8WXG6 1647 aa12.11□□□□□ -0.47
RPGR-201ENST00000318842 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.11□□□□□ -0.47
RPGR-201ENST00000318842 NOL8Q76FK4 1167 aaKnown RBP12.11□□□□□ -0.47
RPGR-201ENST00000318842 C16orf71Q8IYS4 520 aaPredicted RBP12.11□□□□□ -0.47
RPGR-201ENST00000318842 TSPYL6Q8N831 410 aa12.1□□□□□ -0.47
RPGR-201ENST00000318842 RBM27Q9P2N5 1060 aaKnown RBP12.1□□□□□ -0.47
RPGR-201ENST00000318842 TRIM35Q9UPQ4 493 aa12.09□□□□□ -0.47
RPGR-201ENST00000318842 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.09□□□□□ -0.47
RPGR-201ENST00000318842 OTUD7AQ8TE49 926 aaPredicted RBP12.09□□□□□ -0.47
RPGR-201ENST00000318842 RIPK4P57078 832 aa12.09□□□□□ -0.47
RPGR-201ENST00000318842 TRIM44Q96DX7 344 aaPredicted RBP12.09□□□□□ -0.47
RPGR-201ENST00000318842 CLTCL1P53675 1640 aa12.08□□□□□ -0.47
RPGR-201ENST00000318842 CLCN1P35523 988 aa12.08□□□□□ -0.48
RPGR-201ENST00000318842 KIF2CQ99661 725 aa12.08□□□□□ -0.48
RPGR-201ENST00000318842 NOS1P29475 1434 aa12.08□□□□□ -0.48
RPGR-201ENST00000318842 ABCC2Q92887 1545 aa12.08□□□□□ -0.48
RPGR-201ENST00000318842 ARHGEF5Q12774 1597 aa12.08□□□□□ -0.48
RPGR-201ENST00000318842 EFCAB2Q5VUJ9 269 aa12.07□□□□□ -0.48
RPGR-201ENST00000318842 ATF7IPQ6VMQ6 1270 aa12.07□□□□□ -0.48
RPGR-201ENST00000318842 MINK1Q8N4C8 1332 aaPredicted RBP12.07□□□□□ -0.48
RPGR-201ENST00000318842 NUP160Q12769 1436 aa12.07□□□□□ -0.48
RPGR-201ENST00000318842 DCTN1Q14203 1278 aa12.07□□□□□ -0.48
RPGR-201ENST00000318842 MAST1Q9Y2H9 1570 aa12.07□□□□□ -0.48
RPGR-201ENST00000318842 SCAPERQ9BY12 1400 aa12.07□□□□□ -0.48
RPGR-201ENST00000318842 SRPK2P78362 688 aaKnown RBP12.06□□□□□ -0.48
RPGR-201ENST00000318842 KRT24Q2M2I5 525 aa12.06□□□□□ -0.48
RPGR-201ENST00000318842 TSHZ3Q63HK5 1081 aa12.06□□□□□ -0.48
RPGR-201ENST00000318842 PREX2Q70Z35 1606 aa12.06□□□□□ -0.48
RPGR-201ENST00000318842 TMPOP42166 694 aaKnown RBP12.06□□□□□ -0.48
RPGR-201ENST00000318842 MRE11P49959 708 aa12.06□□□□□ -0.48
RPGR-201ENST00000318842 MCTP1Q6DN14 999 aa12.06□□□□□ -0.48
RPGR-201ENST00000318842 SMARCA5O60264 1052 aaPredicted RBP12.06□□□□□ -0.48
RPGR-201ENST00000318842 TBC1D9Q6ZT07 1266 aa12.06□□□□□ -0.48
RPGR-201ENST00000318842 IQGAP1P46940 1657 aa12.06□□□□□ -0.48
RPGR-201ENST00000318842 EIF2AK4Q9P2K8 1649 aaKnown RBP12.06□□□□□ -0.48
RPGR-201ENST00000318842 UNC13BO14795 1591 aa12.06□□□□□ -0.48
RPGR-201ENST00000318842 VIRMAQ69YN4 1812 aaKnown RBP12.05□□□□□ -0.48
RPGR-201ENST00000318842 RNF17Q9BXT8 1623 aaKnown RBP12.05□□□□□ -0.48
RPGR-201ENST00000318842 FAM83GA6ND36 823 aa12.05□□□□□ -0.48
RPGR-201ENST00000318842 CAVIN1Q6NZI2 390 aaKnown RBP12.05□□□□□ -0.48
RPGR-201ENST00000318842 CEP152O94986 1710 aa12.05□□□□□ -0.48
RPGR-201ENST00000318842 CD109Q6YHK3 1445 aa12.05□□□□□ -0.48
RPGR-201ENST00000318842 XPCQ01831 940 aaPredicted RBP12.05□□□□□ -0.48
RPGR-201ENST00000318842 IQGAP3Q86VI3 1631 aa12.05□□□□□ -0.48
RPGR-201ENST00000318842 RSPH4AQ5TD94 716 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms