RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 METP08581 1390 aa11.38□□□□□ -0.59
CDC42-201ENST00000315554 STRCP1A6NGW2 1772 aa11.38□□□□□ -0.59
CDC42-201ENST00000315554 PTPRUQ92729 1446 aa11.37□□□□□ -0.59
CDC42-201ENST00000315554 ALKQ9UM73 1620 aa11.37□□□□□ -0.59
CDC42-201ENST00000315554 CERKQ8TCT0 537 aa11.37□□□□□ -0.59
CDC42-201ENST00000315554 L3MBTL2Q969R5 705 aa11.37□□□□□ -0.59
CDC42-201ENST00000315554 MYOM2P54296 1465 aa11.36□□□□□ -0.59
CDC42-201ENST00000315554 PIK3C2GO75747 1445 aa11.36□□□□□ -0.59
CDC42-201ENST00000315554 KCNA6P17658 529 aa11.36□□□□□ -0.59
CDC42-201ENST00000315554 CFAP70Q5T0N1 1121 aa11.36□□□□□ -0.59
CDC42-201ENST00000315554 TMEM132EQ6IEE7 984 aa11.36□□□□□ -0.59
CDC42-201ENST00000315554 DIP2AQ14689 1571 aa11.36□□□□□ -0.59
CDC42-201ENST00000315554 AMOTL2Q9Y2J4 779 aa11.35□□□□□ -0.59
CDC42-201ENST00000315554 NRXN1Q9ULB1 1477 aa11.34□□□□□ -0.59
CDC42-201ENST00000315554 PROSER2Q86WR7 435 aaPredicted RBP11.34□□□□□ -0.59
CDC42-201ENST00000315554 STK26Q9P289 416 aa11.34□□□□□ -0.59
CDC42-201ENST00000315554 SETD1AO15047 1707 aaKnown RBP11.33□□□□□ -0.6
CDC42-201ENST00000315554 TONSLQ96HA7 1378 aa11.33□□□□□ -0.6
CDC42-201ENST00000315554 CPS1P31327 1500 aa11.33□□□□□ -0.6
CDC42-201ENST00000315554 LRRC7Q96NW7 1537 aa11.33□□□□□ -0.6
CDC42-201ENST00000315554 NWD1Q149M9 1564 aa11.33□□□□□ -0.6
CDC42-201ENST00000315554 ASXL1Q8IXJ9 1541 aa11.32□□□□□ -0.6
CDC42-201ENST00000315554 C14orf93Q9H972 538 aaKnown RBP11.32□□□□□ -0.6
CDC42-201ENST00000315554 CHD2O14647 1828 aaKnown RBP11.32□□□□□ -0.6
CDC42-201ENST00000315554 TMEM94Q12767 1356 aa11.32□□□□□ -0.6
CDC42-201ENST00000315554 PIK3R4Q99570 1358 aa11.32□□□□□ -0.6
CDC42-201ENST00000315554 ZNF579Q8NAF0 562 aaKnown RBP11.32□□□□□ -0.6
CDC42-201ENST00000315554 PRAG1Q86YV5 1406 aa11.3□□□□□ -0.6
CDC42-201ENST00000315554 OTUD5Q96G74 571 aa11.3□□□□□ -0.6
CDC42-201ENST00000315554 NKTRP30414 1462 aaKnown RBP11.3□□□□□ -0.6
CDC42-201ENST00000315554 XRN1Q8IZH2 1706 aaKnown RBP11.3□□□□□ -0.6
CDC42-201ENST00000315554 ROBO2Q9HCK4 1378 aa11.29□□□□□ -0.6
CDC42-201ENST00000315554 NBPF1Q3BBV0 1214 aa11.29□□□□□ -0.6
CDC42-201ENST00000315554 NBPF8Q3BBV2 869 aa11.29□□□□□ -0.6
CDC42-201ENST00000315554 C14orf37Q86TY3 774 aa11.29□□□□□ -0.6
CDC42-201ENST00000315554 YTHDC2Q9H6S0 1430 aaKnown RBP11.28□□□□□ -0.6
CDC42-201ENST00000315554 STAC3Q96MF2 364 aa11.28□□□□□ -0.6
CDC42-201ENST00000315554 RTN4Q9NQC3 1192 aaKnown RBP11.28□□□□□ -0.6
CDC42-201ENST00000315554 LRPPRCP42704 1394 aaKnown RBP11.28□□□□□ -0.6
CDC42-201ENST00000315554 XIRP1Q702N8 1843 aaKnown RBP11.27□□□□□ -0.6
CDC42-201ENST00000315554 LAMC1P11047 1609 aa11.27□□□□□ -0.6
CDC42-201ENST00000315554 UBAP1LF5GYI3 381 aa11.27□□□□□ -0.6
CDC42-201ENST00000315554 WAPLQ7Z5K2 1190 aa11.27□□□□□ -0.6
CDC42-201ENST00000315554 TRAK1Q9UPV9 953 aa11.27□□□□□ -0.6
CDC42-201ENST00000315554 CLSPNQ9HAW4 1339 aa11.27□□□□□ -0.61
CDC42-201ENST00000315554 PLEKHH1Q9ULM0 1364 aa11.27□□□□□ -0.61
CDC42-201ENST00000315554 ADGRB1O14514 1584 aa11.27□□□□□ -0.61
CDC42-201ENST00000315554 POTEMA6NI47 508 aa11.26□□□□□ -0.61
CDC42-201ENST00000315554 SAFB2Q14151 953 aaKnown RBP eCLIP11.26□□□□□ -0.61
CDC42-201ENST00000315554 PCDH10Q9P2E7 1040 aa11.25□□□□□ -0.61
CDC42-201ENST00000315554 PIP4K2BP78356 416 aa11.25□□□□□ -0.61
CDC42-201ENST00000315554 ABCC11Q96J66 1382 aa11.25□□□□□ -0.61
CDC42-201ENST00000315554 PTCH1Q13635 1447 aa11.25□□□□□ -0.61
CDC42-201ENST00000315554 IQSEC2Q5JU85 1478 aa11.25□□□□□ -0.61
CDC42-201ENST00000315554 MSH6P52701 1360 aa11.24□□□□□ -0.61
CDC42-201ENST00000315554 PRAM1Q96QH2 718 aa11.24□□□□□ -0.61
CDC42-201ENST00000315554 POGKQ9P215 609 aa11.23□□□□□ -0.61
CDC42-201ENST00000315554 TRPM1Q7Z4N2 1603 aa11.22□□□□□ -0.61
CDC42-201ENST00000315554 TECPR2O15040 1411 aa11.22□□□□□ -0.61
CDC42-201ENST00000315554 ROCK2O75116 1388 aaKnown RBP11.22□□□□□ -0.61
CDC42-201ENST00000315554 FBXO41Q8TF61 875 aa11.22□□□□□ -0.61
CDC42-201ENST00000315554 KNDC1Q76NI1 1749 aa11.22□□□□□ -0.61
CDC42-201ENST00000315554 ADGRL3Q9HAR2 1447 aa11.21□□□□□ -0.61
CDC42-201ENST00000315554 NALCNQ8IZF0 1738 aa11.21□□□□□ -0.61
CDC42-201ENST00000315554 KIAA1210Q9ULL0 1709 aa11.21□□□□□ -0.61
CDC42-201ENST00000315554 TOM1O60784 492 aa11.21□□□□□ -0.61
CDC42-201ENST00000315554 POTEGQ6S5H5 508 aa11.21□□□□□ -0.61
CDC42-201ENST00000315554 ILDR1Q86SU0 546 aaPredicted RBP11.21□□□□□ -0.61
CDC42-201ENST00000315554 C19orf44Q9H6X5 657 aa11.21□□□□□ -0.61
CDC42-201ENST00000315554 MINK1Q8N4C8 1332 aaPredicted RBP11.2□□□□□ -0.62
CDC42-201ENST00000315554 ATF3P18847 181 aa11.2□□□□□ -0.62
CDC42-201ENST00000315554 HIRIP3Q9BW71 556 aaPredicted RBP11.2□□□□□ -0.62
CDC42-201ENST00000315554 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.2□□□□□ -0.62
CDC42-201ENST00000315554 NCOA3Q9Y6Q9 1424 aa11.2□□□□□ -0.62
CDC42-201ENST00000315554 NUTM2FA1L443 756 aa11.19□□□□□ -0.62
CDC42-201ENST00000315554 CARD11Q9BXL7 1154 aa11.19□□□□□ -0.62
CDC42-201ENST00000315554 FAM135BQ49AJ0 1406 aa11.19□□□□□ -0.62
CDC42-201ENST00000315554 DLC1Q96QB1 1528 aa11.19□□□□□ -0.62
CDC42-201ENST00000315554 RALGAPBQ86X10 1494 aa11.19□□□□□ -0.62
CDC42-201ENST00000315554 SIRT1Q96EB6 747 aa11.19□□□□□ -0.62
CDC42-201ENST00000315554 ARHGEF28Q8N1W1 1705 aaKnown RBP11.18□□□□□ -0.62
CDC42-201ENST00000315554 POTEB2H3BUK9 544 aa11.18□□□□□ -0.62
CDC42-201ENST00000315554 CADPS2Q86UW7 1296 aa11.18□□□□□ -0.62
CDC42-201ENST00000315554 SLAIN2Q9P270 581 aa11.18□□□□□ -0.62
CDC42-201ENST00000315554 ZRANB1Q9UGI0 708 aa11.18□□□□□ -0.62
CDC42-201ENST00000315554 TIMELESSQ9UNS1 1208 aa11.18□□□□□ -0.62
CDC42-201ENST00000315554 MST1RQ04912 1400 aa11.16□□□□□ -0.62
CDC42-201ENST00000315554 GPRASP1Q5JY77 1395 aa11.16□□□□□ -0.62
CDC42-201ENST00000315554 CENPJQ9HC77 1338 aaPredicted RBP11.15□□□□□ -0.62
CDC42-201ENST00000315554 DCCP43146 1447 aa11.15□□□□□ -0.62
CDC42-201ENST00000315554 GALR2O43603 387 aaPredicted RBP11.14□□□□□ -0.63
CDC42-201ENST00000315554 CDC42BPGQ6DT37 1551 aa11.14□□□□□ -0.63
CDC42-201ENST00000315554 HSPA1LP34931 641 aa11.13□□□□□ -0.63
CDC42-201ENST00000315554 ORAI2Q96SN7 254 aa11.13□□□□□ -0.63
CDC42-201ENST00000315554 C1orf167Q5SNV9 1468 aa11.13□□□□□ -0.63
CDC42-201ENST00000315554 ROBO1Q9Y6N7 1651 aa11.13□□□□□ -0.63
CDC42-201ENST00000315554 BRINP3Q76B58 766 aa11.12□□□□□ -0.63
CDC42-201ENST00000315554 DDX17Q92841 729 aaKnown RBP11.12□□□□□ -0.63
CDC42-201ENST00000315554 QRICH2Q9H0J4 1663 aa11.12□□□□□ -0.63
CDC42-201ENST00000315554 EIF3AQ14152 1382 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms