RNA–Protein interactions for RNA: ENST00000312579.3

CCDC85B-201, Transcript of coiled-coil domain containing 85B, humanhuman

APPRIS P1 BASIC

Gene CCDC85B, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85B-201ENST00000312579 TMEM94Q12767 1356 aa31.44■■■□□ 2.62
CCDC85B-201ENST00000312579 LRRC7Q96NW7 1537 aa31.43■■■□□ 2.62
CCDC85B-201ENST00000312579 LTBP4Q8N2S1 1624 aa31.42■■■□□ 2.62
CCDC85B-201ENST00000312579 C11orf95C9JLR9 678 aaPredicted RBP31.39■■■□□ 2.62
CCDC85B-201ENST00000312579 C14orf37Q86TY3 774 aa31.39■■■□□ 2.62
CCDC85B-201ENST00000312579 DISP3Q9P2K9 1392 aa31.37■■■□□ 2.61
CCDC85B-201ENST00000312579 NALCNQ8IZF0 1738 aa31.37■■■□□ 2.61
CCDC85B-201ENST00000312579 SBNO2Q9Y2G9 1366 aa31.37■■■□□ 2.61
CCDC85B-201ENST00000312579 XIRP1Q702N8 1843 aaKnown RBP31.37■■■□□ 2.61
CCDC85B-201ENST00000312579 ZNF316A6NFI3 1004 aaPredicted RBP31.35■■■□□ 2.61
CCDC85B-201ENST00000312579 TULP4Q9NRJ4 1543 aa31.35■■■□□ 2.61
CCDC85B-201ENST00000312579 ADGRL3Q9HAR2 1447 aa31.34■■■□□ 2.61
CCDC85B-201ENST00000312579 TMF1P82094 1093 aa31.33■■■□□ 2.61
CCDC85B-201ENST00000312579 CDK19Q9BWU1 502 aa31.32■■■□□ 2.6
CCDC85B-201ENST00000312579 EVC2Q86UK5 1308 aa31.3■■■□□ 2.6
CCDC85B-201ENST00000312579 WASLO00401 505 aaPredicted RBP31.3■■■□□ 2.6
CCDC85B-201ENST00000312579 CABP2Q9NPB3 220 aa31.3■■■□□ 2.6
CCDC85B-201ENST00000312579 ADGRB2O60241 1585 aa31.3■■■□□ 2.6
CCDC85B-201ENST00000312579 NUTM2FA1L443 756 aa31.29■■■□□ 2.6
CCDC85B-201ENST00000312579 POLR3GLQ9BT43 218 aa31.29■■■□□ 2.6
CCDC85B-201ENST00000312579 NCOA3Q9Y6Q9 1424 aa31.28■■■□□ 2.6
CCDC85B-201ENST00000312579 SRPK2P78362 688 aaKnown RBP31.27■■■□□ 2.6
CCDC85B-201ENST00000312579 C19orf44Q9H6X5 657 aa31.27■■■□□ 2.6
CCDC85B-201ENST00000312579 KIF7Q2M1P5 1343 aa31.26■■■□□ 2.59
CCDC85B-201ENST00000312579 WASHC2AQ641Q2 1341 aa31.24■■■□□ 2.59
CCDC85B-201ENST00000312579 MSH6P52701 1360 aa31.24■■■□□ 2.59
CCDC85B-201ENST00000312579 CDC42BPGQ6DT37 1551 aa31.23■■■□□ 2.59
CCDC85B-201ENST00000312579 SLC24A1O60721 1099 aa31.22■■■□□ 2.59
CCDC85B-201ENST00000312579 PRR36Q9H6K5 1346 aa31.21■■■□□ 2.59
CCDC85B-201ENST00000312579 CCDC7Q96M83 1385 aa31.2■■■□□ 2.59
CCDC85B-201ENST00000312579 ATF3P18847 181 aa31.19■■■□□ 2.58
CCDC85B-201ENST00000312579 FMN2Q9NZ56 1722 aa31.18■■■□□ 2.58
CCDC85B-201ENST00000312579 CDCA8Q53HL2 280 aa31.17■■■□□ 2.58
CCDC85B-201ENST00000312579 NUDT16Q96DE0 195 aaKnown RBP31.17■■■□□ 2.58
CCDC85B-201ENST00000312579 USP32Q8NFA0 1604 aa31.15■■■□□ 2.58
CCDC85B-201ENST00000312579 CADPS2Q86UW7 1296 aa31.14■■■□□ 2.58
CCDC85B-201ENST00000312579 DCCP43146 1447 aa31.14■■■□□ 2.58
CCDC85B-201ENST00000312579 ATP7BP35670 1465 aa31.14■■■□□ 2.58
CCDC85B-201ENST00000312579 RGPD8O14715 1765 aaPredicted RBP31.13■■■□□ 2.57
CCDC85B-201ENST00000312579 TMC1Q8TDI8 760 aa31.12■■■□□ 2.57
CCDC85B-201ENST00000312579 MST1RQ04912 1400 aa31.11■■■□□ 2.57
CCDC85B-201ENST00000312579 CERKQ8TCT0 537 aa31.11■■■□□ 2.57
CCDC85B-201ENST00000312579 PUS7Q96PZ0 661 aaKnown RBP31.11■■■□□ 2.57
CCDC85B-201ENST00000312579 SLC12A5Q9H2X9 1139 aa31.1■■■□□ 2.57
CCDC85B-201ENST00000312579 ATAD2Q6PL18 1390 aa31.1■■■□□ 2.57
CCDC85B-201ENST00000312579 CABP1Q9NZU7 370 aa31.08■■■□□ 2.57
CCDC85B-201ENST00000312579 C1orf167Q5SNV9 1468 aa31.08■■■□□ 2.57
CCDC85B-201ENST00000312579 ANKARQ7Z5J8 1434 aa31.08■■■□□ 2.57
CCDC85B-201ENST00000312579 CCDC61Q9Y6R9 512 aa31.08■■■□□ 2.57
CCDC85B-201ENST00000312579 ORAI2Q96SN7 254 aa31.07■■■□□ 2.56
CCDC85B-201ENST00000312579 PPIP5K1Q6PFW1 1433 aa31.07■■■□□ 2.56
CCDC85B-201ENST00000312579 MYOM1P52179 1685 aa31.06■■■□□ 2.56
CCDC85B-201ENST00000312579 ESCO1Q5FWF5 840 aa31.05■■■□□ 2.56
CCDC85B-201ENST00000312579 PMFBP1Q8TBY8 1022 aa31.05■■■□□ 2.56
CCDC85B-201ENST00000312579 SLAIN2Q9P270 581 aa31.05■■■□□ 2.56
CCDC85B-201ENST00000312579 TOPAZ1Q8N9V7 1692 aa31.04■■■□□ 2.56
CCDC85B-201ENST00000312579 DDX10Q13206 875 aaKnown RBP31.03■■■□□ 2.56
CCDC85B-201ENST00000312579 ILDR1Q86SU0 546 aaPredicted RBP31■■■□□ 2.55
CCDC85B-201ENST00000312579 PHF8Q9UPP1 1060 aa30.99■■■□□ 2.55
CCDC85B-201ENST00000312579 ITSN1Q15811 1721 aa30.98■■■□□ 2.55
CCDC85B-201ENST00000312579 PLEKHG3A1L390 1219 aa30.98■■■□□ 2.55
CCDC85B-201ENST00000312579 IQSEC2Q5JU85 1478 aa30.98■■■□□ 2.55
CCDC85B-201ENST00000312579 UBAP1LF5GYI3 381 aa30.97■■■□□ 2.55
CCDC85B-201ENST00000312579 PANK3Q9H999 370 aa30.97■■■□□ 2.55
CCDC85B-201ENST00000312579 CD163L1Q9NR16 1453 aa30.97■■■□□ 2.55
CCDC85B-201ENST00000312579 ACEP12821 1306 aa30.96■■■□□ 2.55
CCDC85B-201ENST00000312579 BRINP3Q76B58 766 aa30.95■■■□□ 2.55
CCDC85B-201ENST00000312579 DIEXFQ68CQ4 756 aaKnown RBP30.94■■■□□ 2.54
CCDC85B-201ENST00000312579 NINLQ9Y2I6 1382 aa30.94■■■□□ 2.54
CCDC85B-201ENST00000312579 TOM1O60784 492 aa30.93■■■□□ 2.54
CCDC85B-201ENST00000312579 NGDNQ8NEJ9 315 aaKnown RBP30.93■■■□□ 2.54
CCDC85B-201ENST00000312579 DDX17Q92841 729 aaKnown RBP30.93■■■□□ 2.54
CCDC85B-201ENST00000312579 A0A1W2PP64 1363 aa30.93■■■□□ 2.54
CCDC85B-201ENST00000312579 FOXO3O43524 673 aa30.92■■■□□ 2.54
CCDC85B-201ENST00000312579 PIP4K2BP78356 416 aa30.92■■■□□ 2.54
CCDC85B-201ENST00000312579 CARD14Q9BXL6 1004 aa30.91■■■□□ 2.54
CCDC85B-201ENST00000312579 ANKRD36BQ8N2N9 1353 aa30.9■■■□□ 2.54
CCDC85B-201ENST00000312579 TERF2IPQ9NYB0 399 aa30.9■■■□□ 2.54
CCDC85B-201ENST00000312579 POLR3AO14802 1390 aaPredicted RBP30.89■■■□□ 2.54
CCDC85B-201ENST00000312579 CPSF1Q10570 1443 aaKnown RBP30.89■■■□□ 2.54
CCDC85B-201ENST00000312579 XPCQ01831 940 aaPredicted RBP30.88■■■□□ 2.53
CCDC85B-201ENST00000312579 HDGFL2Q7Z4V5 671 aaPredicted RBP30.88■■■□□ 2.53
CCDC85B-201ENST00000312579 FBXO41Q8TF61 875 aa30.88■■■□□ 2.53
CCDC85B-201ENST00000312579 SCAF1Q9H7N4 1312 aaKnown RBP30.88■■■□□ 2.53
CCDC85B-201ENST00000312579 KIF1AQ12756 1690 aa30.87■■■□□ 2.53
CCDC85B-201ENST00000312579 KTN1Q86UP2 1357 aaKnown RBP30.86■■■□□ 2.53
CCDC85B-201ENST00000312579 ROBO1Q9Y6N7 1651 aa30.86■■■□□ 2.53
CCDC85B-201ENST00000312579 AKAP12Q02952 1782 aa30.86■■■□□ 2.53
CCDC85B-201ENST00000312579 PSME1Q06323 249 aa30.83■■■□□ 2.53
CCDC85B-201ENST00000312579 NSD3Q9BZ95 1437 aa30.83■■■□□ 2.53
CCDC85B-201ENST00000312579 ZNF692Q9BU19 519 aaPredicted RBP30.83■■■□□ 2.53
CCDC85B-201ENST00000312579 USP6P35125 1406 aa30.82■■■□□ 2.52
CCDC85B-201ENST00000312579 MON2Q7Z3U7 1717 aa30.81■■■□□ 2.52
CCDC85B-201ENST00000312579 PER1O15534 1290 aaPredicted RBP30.8■■■□□ 2.52
CCDC85B-201ENST00000312579 KRT28Q7Z3Y7 464 aa30.8■■■□□ 2.52
CCDC85B-201ENST00000312579 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.8■■■□□ 2.52
CCDC85B-201ENST00000312579 NPHP3Q7Z494 1330 aa30.78■■■□□ 2.52
CCDC85B-201ENST00000312579 CNGB1Q14028 1251 aaPredicted RBP30.78■■■□□ 2.52
CCDC85B-201ENST00000312579 PAK3O75914 559 aaPredicted RBP30.76■■■□□ 2.51
CCDC85B-201ENST00000312579 EDC4Q6P2E9 1401 aaKnown RBP30.75■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms