RNA–Protein interactions for RNA: ENST00000311350.7

HERPUD2-201, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-201ENST00000311350 LMTK2Q8IWU2 1503 aa24.58■■□□□ 1.52
HERPUD2-201ENST00000311350 ILDR1Q86SU0 546 aaPredicted RBP24.57■■□□□ 1.52
HERPUD2-201ENST00000311350 SYNMO15061 1565 aa24.56■■□□□ 1.52
HERPUD2-201ENST00000311350 CC2D1BQ5T0F9 858 aaKnown RBP24.56■■□□□ 1.52
HERPUD2-201ENST00000311350 TRPM2O94759 1503 aa24.55■■□□□ 1.52
HERPUD2-201ENST00000311350 FAM43AQ8N2R8 423 aa24.54■■□□□ 1.52
HERPUD2-201ENST00000311350 RSPH6AQ9H0K4 717 aa24.54■■□□□ 1.52
HERPUD2-201ENST00000311350 UGGT1Q9NYU2 1555 aa24.54■■□□□ 1.52
HERPUD2-201ENST00000311350 CDCA8Q53HL2 280 aa24.54■■□□□ 1.52
HERPUD2-201ENST00000311350 THEMISQ8N1K5 641 aaPredicted RBP24.54■■□□□ 1.52
HERPUD2-201ENST00000311350 NPC1L1Q9UHC9 1359 aa24.53■■□□□ 1.52
HERPUD2-201ENST00000311350 C8orf34Q49A92 452 aa24.53■■□□□ 1.52
HERPUD2-201ENST00000311350 NEURL4Q96JN8 1562 aa24.52■■□□□ 1.52
HERPUD2-201ENST00000311350 SPHKAPQ2M3C7 1700 aa24.51■■□□□ 1.51
HERPUD2-201ENST00000311350 KDM2BQ8NHM5 1336 aa24.51■■□□□ 1.51
HERPUD2-201ENST00000311350 PIK3C2GO75747 1445 aa24.5■■□□□ 1.51
HERPUD2-201ENST00000311350 SCAF11Q99590 1463 aaKnown RBP24.5■■□□□ 1.51
HERPUD2-201ENST00000311350 CERKQ8TCT0 537 aa24.49■■□□□ 1.51
HERPUD2-201ENST00000311350 EFCAB6Q5THR3 1501 aa24.49■■□□□ 1.51
HERPUD2-201ENST00000311350 FAM161AQ3B820 660 aa24.47■■□□□ 1.51
HERPUD2-201ENST00000311350 FBXO41Q8TF61 875 aa24.47■■□□□ 1.51
HERPUD2-201ENST00000311350 ANKLE2Q86XL3 938 aa24.46■■□□□ 1.51
HERPUD2-201ENST00000311350 KIAA1210Q9ULL0 1709 aa24.46■■□□□ 1.51
HERPUD2-201ENST00000311350 ASXL1Q8IXJ9 1541 aa24.46■■□□□ 1.51
HERPUD2-201ENST00000311350 CFAP65Q6ZU64 1925 aaKnown RBP24.46■■□□□ 1.51
HERPUD2-201ENST00000311350 KNSTRNQ9Y448 316 aa24.46■■□□□ 1.51
HERPUD2-201ENST00000311350 ZNF521Q96K83 1311 aa24.46■■□□□ 1.51
HERPUD2-201ENST00000311350 PPP2R1AP30153 589 aa24.45■■□□□ 1.51
HERPUD2-201ENST00000311350 AMER1Q5JTC6 1135 aaPredicted RBP24.45■■□□□ 1.5
HERPUD2-201ENST00000311350 RGS3P49796 1198 aa24.44■■□□□ 1.5
HERPUD2-201ENST00000311350 RRAGDQ9NQL2 400 aaPredicted RBP24.44■■□□□ 1.5
HERPUD2-201ENST00000311350 POGKQ9P215 609 aa24.44■■□□□ 1.5
HERPUD2-201ENST00000311350 ADAMTS8Q9UP79 889 aa24.44■■□□□ 1.5
HERPUD2-201ENST00000311350 NOS1P29475 1434 aa24.43■■□□□ 1.5
HERPUD2-201ENST00000311350 SLC24A1O60721 1099 aa24.43■■□□□ 1.5
HERPUD2-201ENST00000311350 EIF3AQ14152 1382 aaKnown RBP24.41■■□□□ 1.5
HERPUD2-201ENST00000311350 TET3O43151 1660 aa24.41■■□□□ 1.5
HERPUD2-201ENST00000311350 WDR43Q15061 677 aaKnown RBP eCLIP24.41■■□□□ 1.5
HERPUD2-201ENST00000311350 DUSP27Q5VZP5 1158 aa24.41■■□□□ 1.5
HERPUD2-201ENST00000311350 CENPQQ7L2Z9 268 aaPredicted RBP24.4■■□□□ 1.5
HERPUD2-201ENST00000311350 PLEKHH1Q9ULM0 1364 aa24.4■■□□□ 1.5
HERPUD2-201ENST00000311350 UBR1Q8IWV7 1749 aa24.39■■□□□ 1.5
HERPUD2-201ENST00000311350 LTBP4Q8N2S1 1624 aa24.39■■□□□ 1.49
HERPUD2-201ENST00000311350 IDI1Q13907 227 aa24.39■■□□□ 1.49
HERPUD2-201ENST00000311350 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.39■■□□□ 1.49
HERPUD2-201ENST00000311350 CLTCL1P53675 1640 aa24.39■■□□□ 1.49
HERPUD2-201ENST00000311350 ZNF335Q9H4Z2 1342 aaPredicted RBP24.38■■□□□ 1.49
HERPUD2-201ENST00000311350 MYOM1P52179 1685 aa24.38■■□□□ 1.49
HERPUD2-201ENST00000311350 STAG3Q9UJ98 1225 aa24.37■■□□□ 1.49
HERPUD2-201ENST00000311350 MED14O60244 1454 aa24.37■■□□□ 1.49
HERPUD2-201ENST00000311350 GOLGA2Q08379 1002 aa24.36■■□□□ 1.49
HERPUD2-201ENST00000311350 NGEFQ8N5V2 710 aa24.36■■□□□ 1.49
HERPUD2-201ENST00000311350 SLC52A1Q9NWF4 448 aa24.36■■□□□ 1.49
HERPUD2-201ENST00000311350 PIK3C2BO00750 1634 aa24.36■■□□□ 1.49
HERPUD2-201ENST00000311350 NPHP4O75161 1426 aaPredicted RBP24.36■■□□□ 1.49
HERPUD2-201ENST00000311350 TRMT2AQ8IZ69 625 aaKnown RBP24.35■■□□□ 1.49
HERPUD2-201ENST00000311350 MYOM2P54296 1465 aa24.34■■□□□ 1.49
HERPUD2-201ENST00000311350 KDM5AP29375 1690 aaKnown RBP24.34■■□□□ 1.49
HERPUD2-201ENST00000311350 ARHGAP23Q9P227 1491 aa24.34■■□□□ 1.49
HERPUD2-201ENST00000311350 SLIT1O75093 1534 aa24.33■■□□□ 1.49
HERPUD2-201ENST00000311350 SLFN5Q08AF3 891 aa24.32■■□□□ 1.48
HERPUD2-201ENST00000311350 PKNOX2Q96KN3 472 aa24.32■■□□□ 1.48
HERPUD2-201ENST00000311350 ARXQ96QS3 562 aa24.32■■□□□ 1.48
HERPUD2-201ENST00000311350 TXNDC2Q86VQ3 553 aa24.31■■□□□ 1.48
HERPUD2-201ENST00000311350 TMEM2Q9UHN6 1383 aa24.31■■□□□ 1.48
HERPUD2-201ENST00000311350 LTKP29376 864 aa24.3■■□□□ 1.48
HERPUD2-201ENST00000311350 EID1Q9Y6B2 187 aa24.3■■□□□ 1.48
HERPUD2-201ENST00000311350 ADGRB3O60242 1522 aa24.28■■□□□ 1.48
HERPUD2-201ENST00000311350 SLKQ9H2G2 1235 aaPredicted RBP24.28■■□□□ 1.48
HERPUD2-201ENST00000311350 USP19O94966 1318 aa24.28■■□□□ 1.48
HERPUD2-201ENST00000311350 IQSEC2Q5JU85 1478 aa24.27■■□□□ 1.48
HERPUD2-201ENST00000311350 NKTRP30414 1462 aaKnown RBP24.26■■□□□ 1.47
HERPUD2-201ENST00000311350 SEC24BO95487 1268 aa24.26■■□□□ 1.47
HERPUD2-201ENST00000311350 SBNO2Q9Y2G9 1366 aa24.24■■□□□ 1.47
HERPUD2-201ENST00000311350 NINLQ9Y2I6 1382 aa24.22■■□□□ 1.47
HERPUD2-201ENST00000311350 NRXN1Q9ULB1 1477 aa24.22■■□□□ 1.47
HERPUD2-201ENST00000311350 E9PSI1 815 aa24.21■■□□□ 1.47
HERPUD2-201ENST00000311350 CPS1P31327 1500 aa24.21■■□□□ 1.47
HERPUD2-201ENST00000311350 IFT172Q9UG01 1749 aa24.19■■□□□ 1.46
HERPUD2-201ENST00000311350 CHGAP10645 457 aaKnown RBP24.19■■□□□ 1.46
HERPUD2-201ENST00000311350 IGHDP01880 384 aa24.18■■□□□ 1.46
HERPUD2-201ENST00000311350 POLR3AO14802 1390 aaPredicted RBP24.18■■□□□ 1.46
HERPUD2-201ENST00000311350 TMEM131LA2VDJ0 1609 aa24.18■■□□□ 1.46
HERPUD2-201ENST00000311350 VSIG10Q8N0Z9 540 aa24.17■■□□□ 1.46
HERPUD2-201ENST00000311350 NAP1L5Q96NT1 182 aaPredicted RBP24.17■■□□□ 1.46
HERPUD2-201ENST00000311350 SETBP1Q9Y6X0 1596 aa24.16■■□□□ 1.46
HERPUD2-201ENST00000311350 ZFYVE9O95405 1425 aa24.15■■□□□ 1.46
HERPUD2-201ENST00000311350 XRCC6P12956 609 aaKnown RBP eCLIP24.15■■□□□ 1.46
HERPUD2-201ENST00000311350 L1TD1Q5T7N2 865 aaKnown RBP24.15■■□□□ 1.46
HERPUD2-201ENST00000311350 KIF1BO60333 1816 aa24.14■■□□□ 1.46
HERPUD2-201ENST00000311350 HDGFP51858 240 aaKnown RBP24.14■■□□□ 1.45
HERPUD2-201ENST00000311350 PANK2Q9BZ23 570 aa24.14■■□□□ 1.45
HERPUD2-201ENST00000311350 RIMS2Q9UQ26 1411 aa24.14■■□□□ 1.45
HERPUD2-201ENST00000311350 ZMYND15Q9H091 742 aa24.13■■□□□ 1.45
HERPUD2-201ENST00000311350 PDE3AQ14432 1141 aa24.13■■□□□ 1.45
HERPUD2-201ENST00000311350 APAF1O14727 1248 aa24.12■■□□□ 1.45
HERPUD2-201ENST00000311350 BCAR3O75815 825 aa24.12■■□□□ 1.45
HERPUD2-201ENST00000311350 CGNL1Q0VF96 1302 aa24.11■■□□□ 1.45
HERPUD2-201ENST00000311350 ANTXR1Q9H6X2 564 aa24.11■■□□□ 1.45
HERPUD2-201ENST00000311350 UBAP1LF5GYI3 381 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms