RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 SIRT1Q96EB6 747 aa12.96□□□□□ -0.34
PDE4D-201ENST00000309641 HIRIP3Q9BW71 556 aaPredicted RBP12.96□□□□□ -0.34
PDE4D-201ENST00000309641 NCOA3Q9Y6Q9 1424 aa12.96□□□□□ -0.34
PDE4D-201ENST00000309641 MINK1Q8N4C8 1332 aaPredicted RBP12.94□□□□□ -0.34
PDE4D-201ENST00000309641 PIP4K2BP78356 416 aa12.94□□□□□ -0.34
PDE4D-201ENST00000309641 NUTM2FA1L443 756 aa12.93□□□□□ -0.34
PDE4D-201ENST00000309641 ATF3P18847 181 aa12.93□□□□□ -0.34
PDE4D-201ENST00000309641 TOM1O60784 492 aa12.92□□□□□ -0.34
PDE4D-201ENST00000309641 SCAF1Q9H7N4 1312 aaKnown RBP12.92□□□□□ -0.34
PDE4D-201ENST00000309641 CADPS2Q86UW7 1296 aa12.91□□□□□ -0.34
PDE4D-201ENST00000309641 FBXO41Q8TF61 875 aa12.91□□□□□ -0.34
PDE4D-201ENST00000309641 SLAIN2Q9P270 581 aa12.91□□□□□ -0.34
PDE4D-201ENST00000309641 CENPJQ9HC77 1338 aaPredicted RBP12.91□□□□□ -0.34
PDE4D-201ENST00000309641 MST1RQ04912 1400 aa12.91□□□□□ -0.34
PDE4D-201ENST00000309641 DCCP43146 1447 aa12.9□□□□□ -0.34
PDE4D-201ENST00000309641 CDC42BPGQ6DT37 1551 aa12.89□□□□□ -0.35
PDE4D-201ENST00000309641 QRICH2Q9H0J4 1663 aa12.88□□□□□ -0.35
PDE4D-201ENST00000309641 ST20-MTHFSA0A0A6YYL1 179 aa12.88□□□□□ -0.35
PDE4D-201ENST00000309641 ORAI2Q96SN7 254 aa12.88□□□□□ -0.35
PDE4D-201ENST00000309641 USP47Q96K76 1375 aa12.88□□□□□ -0.35
PDE4D-201ENST00000309641 ILDR1Q86SU0 546 aaPredicted RBP12.88□□□□□ -0.35
PDE4D-201ENST00000309641 ADGRB2O60241 1585 aa12.88□□□□□ -0.35
PDE4D-201ENST00000309641 C1orf167Q5SNV9 1468 aa12.87□□□□□ -0.35
PDE4D-201ENST00000309641 WASLO00401 505 aaPredicted RBP12.87□□□□□ -0.35
PDE4D-201ENST00000309641 PRR36Q9H6K5 1346 aa12.87□□□□□ -0.35
PDE4D-201ENST00000309641 BRINP3Q76B58 766 aa12.86□□□□□ -0.35
PDE4D-201ENST00000309641 DDX17Q92841 729 aaKnown RBP12.86□□□□□ -0.35
PDE4D-201ENST00000309641 FMN2Q9NZ56 1722 aa12.86□□□□□ -0.35
PDE4D-201ENST00000309641 EIF3AQ14152 1382 aaKnown RBP12.86□□□□□ -0.35
PDE4D-201ENST00000309641 ROBO1Q9Y6N7 1651 aa12.86□□□□□ -0.35
PDE4D-201ENST00000309641 RGPD8O14715 1765 aaPredicted RBP12.86□□□□□ -0.35
PDE4D-201ENST00000309641 CDK19Q9BWU1 502 aa12.86□□□□□ -0.35
PDE4D-201ENST00000309641 TULP4Q9NRJ4 1543 aa12.86□□□□□ -0.35
PDE4D-201ENST00000309641 TESK2Q96S53 571 aa12.85□□□□□ -0.35
PDE4D-201ENST00000309641 USP32Q8NFA0 1604 aa12.85□□□□□ -0.35
PDE4D-201ENST00000309641 CABP2Q9NPB3 220 aa12.84□□□□□ -0.35
PDE4D-201ENST00000309641 ESCO1Q5FWF5 840 aa12.84□□□□□ -0.35
PDE4D-201ENST00000309641 HSPA1LP34931 641 aa12.83□□□□□ -0.36
PDE4D-201ENST00000309641 HSPA5P11021 654 aaKnown RBP12.83□□□□□ -0.36
PDE4D-201ENST00000309641 SRPK2P78362 688 aaKnown RBP12.82□□□□□ -0.36
PDE4D-201ENST00000309641 NUDT16Q96DE0 195 aaKnown RBP12.82□□□□□ -0.36
PDE4D-201ENST00000309641 ATP7BP35670 1465 aa12.82□□□□□ -0.36
PDE4D-201ENST00000309641 SBNO2Q9Y2G9 1366 aa12.82□□□□□ -0.36
PDE4D-201ENST00000309641 PMFBP1Q8TBY8 1022 aa12.81□□□□□ -0.36
PDE4D-201ENST00000309641 FOXO3O43524 673 aa12.81□□□□□ -0.36
PDE4D-201ENST00000309641 EVC2Q86UK5 1308 aa12.8□□□□□ -0.36
PDE4D-201ENST00000309641 EIF4G2P78344 907 aaKnown RBP eCLIP12.8□□□□□ -0.36
PDE4D-201ENST00000309641 XPCQ01831 940 aaPredicted RBP12.8□□□□□ -0.36
PDE4D-201ENST00000309641 DISP3Q9P2K9 1392 aa12.8□□□□□ -0.36
PDE4D-201ENST00000309641 ANKARQ7Z5J8 1434 aa12.79□□□□□ -0.36
PDE4D-201ENST00000309641 PHF8Q9UPP1 1060 aa12.79□□□□□ -0.36
PDE4D-201ENST00000309641 CCDC61Q9Y6R9 512 aa12.78□□□□□ -0.36
PDE4D-201ENST00000309641 NHSL1Q5SYE7 1610 aa12.77□□□□□ -0.37
PDE4D-201ENST00000309641 C11orf95C9JLR9 678 aaPredicted RBP12.76□□□□□ -0.37
PDE4D-201ENST00000309641 CABP1Q9NZU7 370 aa12.76□□□□□ -0.37
PDE4D-201ENST00000309641 PHLPP1O60346 1717 aa12.76□□□□□ -0.37
PDE4D-201ENST00000309641 AHDC1Q5TGY3 1603 aaPredicted RBP12.76□□□□□ -0.37
PDE4D-201ENST00000309641 TOPAZ1Q8N9V7 1692 aa12.76□□□□□ -0.37
PDE4D-201ENST00000309641 PPIP5K1Q6PFW1 1433 aa12.75□□□□□ -0.37
PDE4D-201ENST00000309641 COL16A1Q07092 1604 aaPredicted RBP12.75□□□□□ -0.37
PDE4D-201ENST00000309641 TMF1P82094 1093 aa12.74□□□□□ -0.37
PDE4D-201ENST00000309641 ACEP12821 1306 aa12.74□□□□□ -0.37
PDE4D-201ENST00000309641 SOS2Q07890 1332 aaPredicted RBP12.74□□□□□ -0.37
PDE4D-201ENST00000309641 NPHP3Q7Z494 1330 aa12.74□□□□□ -0.37
PDE4D-201ENST00000309641 PXDNQ92626 1479 aa12.74□□□□□ -0.37
PDE4D-201ENST00000309641 PLEKHG3A1L390 1219 aa12.74□□□□□ -0.37
PDE4D-201ENST00000309641 NGDNQ8NEJ9 315 aaKnown RBP12.74□□□□□ -0.37
PDE4D-201ENST00000309641 SLC12A5Q9H2X9 1139 aa12.74□□□□□ -0.37
PDE4D-201ENST00000309641 ITSN1Q15811 1721 aa12.73□□□□□ -0.37
PDE4D-201ENST00000309641 KRT28Q7Z3Y7 464 aa12.73□□□□□ -0.37
PDE4D-201ENST00000309641 KIF1AQ12756 1690 aa12.73□□□□□ -0.37
PDE4D-201ENST00000309641 ATAD2Q6PL18 1390 aa12.72□□□□□ -0.37
PDE4D-201ENST00000309641 PSME1Q06323 249 aa12.72□□□□□ -0.37
PDE4D-201ENST00000309641 TMC1Q8TDI8 760 aa12.72□□□□□ -0.37
PDE4D-201ENST00000309641 POLR3AO14802 1390 aaPredicted RBP12.72□□□□□ -0.37
PDE4D-201ENST00000309641 ZEB1P37275 1124 aaPredicted RBP12.71□□□□□ -0.37
PDE4D-201ENST00000309641 POLR3GLQ9BT43 218 aa12.71□□□□□ -0.37
PDE4D-201ENST00000309641 CD163L1Q9NR16 1453 aa12.7□□□□□ -0.38
PDE4D-201ENST00000309641 SLC24A1O60721 1099 aa12.69□□□□□ -0.38
PDE4D-201ENST00000309641 LRRC59Q96AG4 307 aaKnown RBP12.69□□□□□ -0.38
PDE4D-201ENST00000309641 PUS7Q96PZ0 661 aaKnown RBP12.69□□□□□ -0.38
PDE4D-201ENST00000309641 PLEKHG5O94827 1062 aa12.69□□□□□ -0.38
PDE4D-201ENST00000309641 TRPM3Q9HCF6 1732 aaPredicted RBP12.68□□□□□ -0.38
PDE4D-201ENST00000309641 CPSF1Q10570 1443 aaKnown RBP12.68□□□□□ -0.38
PDE4D-201ENST00000309641 SPATA31A3Q5VYP0 1347 aa12.68□□□□□ -0.38
PDE4D-201ENST00000309641 PNPLA6Q8IY17 1366 aa12.68□□□□□ -0.38
PDE4D-201ENST00000309641 PAK3O75914 559 aaPredicted RBP12.67□□□□□ -0.38
PDE4D-201ENST00000309641 LMOD2Q6P5Q4 547 aa12.67□□□□□ -0.38
PDE4D-201ENST00000309641 USP6P35125 1406 aa12.67□□□□□ -0.38
PDE4D-201ENST00000309641 A0A1W2PP64 1363 aa12.67□□□□□ -0.38
PDE4D-201ENST00000309641 JCADQ9P266 1359 aa12.67□□□□□ -0.38
PDE4D-201ENST00000309641 KIF7Q2M1P5 1343 aa12.67□□□□□ -0.38
PDE4D-201ENST00000309641 MYOM1P52179 1685 aa12.67□□□□□ -0.38
PDE4D-201ENST00000309641 CDCA8Q53HL2 280 aa12.66□□□□□ -0.38
PDE4D-201ENST00000309641 NUTM2GQ5VZR2 741 aa12.66□□□□□ -0.38
PDE4D-201ENST00000309641 TNS3Q68CZ2 1445 aa12.66□□□□□ -0.38
PDE4D-201ENST00000309641 SBNO1A3KN83 1393 aa12.66□□□□□ -0.38
PDE4D-201ENST00000309641 CABLES1Q8TDN4 633 aa12.66□□□□□ -0.38
PDE4D-201ENST00000309641 AKAP12Q02952 1782 aa12.65□□□□□ -0.38
PDE4D-201ENST00000309641 SSH2Q76I76 1423 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms