RNA–Protein interactions for RNA: ENST00000309602.4

LRFN4-201, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN4, Length 2,431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-201ENST00000309602 EVC2Q86UK5 1308 aa25.96■■□□□ 1.75
LRFN4-201ENST00000309602 ZFYVE9O95405 1425 aa25.96■■□□□ 1.75
LRFN4-201ENST00000309602 TNNT2P45379 298 aaPredicted RBP25.96■■□□□ 1.75
LRFN4-201ENST00000309602 PREX1Q8TCU6 1659 aa25.96■■□□□ 1.75
LRFN4-201ENST00000309602 TCERG1O14776 1098 aaKnown RBP25.95■■□□□ 1.75
LRFN4-201ENST00000309602 PUS7Q96PZ0 661 aaKnown RBP25.95■■□□□ 1.75
LRFN4-201ENST00000309602 MYO5BQ9ULV0 1848 aa25.95■■□□□ 1.74
LRFN4-201ENST00000309602 BCL11AQ9H165 835 aa25.95■■□□□ 1.74
LRFN4-201ENST00000309602 SHPRHQ149N8 1683 aa25.94■■□□□ 1.74
LRFN4-201ENST00000309602 TMEM131LA2VDJ0 1609 aa25.93■■□□□ 1.74
LRFN4-201ENST00000309602 SENP3Q9H4L4 574 aaPredicted RBP25.93■■□□□ 1.74
LRFN4-201ENST00000309602 DMRT2Q9Y5R5 561 aa25.93■■□□□ 1.74
LRFN4-201ENST00000309602 CGNL1Q0VF96 1302 aa25.92■■□□□ 1.74
LRFN4-201ENST00000309602 NKTRP30414 1462 aaKnown RBP25.91■■□□□ 1.74
LRFN4-201ENST00000309602 SAFB2Q14151 953 aaKnown RBP eCLIP25.91■■□□□ 1.74
LRFN4-201ENST00000309602 NGEFQ8N5V2 710 aa25.91■■□□□ 1.74
LRFN4-201ENST00000309602 ANKRD36BQ8N2N9 1353 aa25.91■■□□□ 1.74
LRFN4-201ENST00000309602 E9PSI1 815 aa25.9■■□□□ 1.74
LRFN4-201ENST00000309602 CABP2Q9NPB3 220 aa25.9■■□□□ 1.74
LRFN4-201ENST00000309602 STK26Q9P289 416 aa25.89■■□□□ 1.73
LRFN4-201ENST00000309602 FBXO31Q5XUX0 539 aaPredicted RBP25.88■■□□□ 1.73
LRFN4-201ENST00000309602 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.88■■□□□ 1.73
LRFN4-201ENST00000309602 KIF13AQ9H1H9 1805 aa25.88■■□□□ 1.73
LRFN4-201ENST00000309602 MTHFSP49914 203 aa25.86■■□□□ 1.73
LRFN4-201ENST00000309602 ANP32AP39687 249 aaKnown RBP25.86■■□□□ 1.73
LRFN4-201ENST00000309602 MS4A1P11836 297 aa25.85■■□□□ 1.73
LRFN4-201ENST00000309602 WWC1Q8IX03 1113 aa25.85■■□□□ 1.73
LRFN4-201ENST00000309602 KDM2BQ8NHM5 1336 aa25.84■■□□□ 1.73
LRFN4-201ENST00000309602 SKAP1Q86WV1 359 aa25.84■■□□□ 1.73
LRFN4-201ENST00000309602 NOP58Q9Y2X3 529 aaKnown RBP25.84■■□□□ 1.73
LRFN4-201ENST00000309602 NSD2O96028 1365 aa25.83■■□□□ 1.73
LRFN4-201ENST00000309602 PTPRMP28827 1452 aa25.83■■□□□ 1.73
LRFN4-201ENST00000309602 PDE4AP27815 886 aa25.83■■□□□ 1.73
LRFN4-201ENST00000309602 RUNDC1Q96C34 613 aa25.83■■□□□ 1.72
LRFN4-201ENST00000309602 BCAR3O75815 825 aa25.82■■□□□ 1.72
LRFN4-201ENST00000309602 IQSEC2Q5JU85 1478 aa25.81■■□□□ 1.72
LRFN4-201ENST00000309602 IPO9Q96P70 1041 aaKnown RBP25.8■■□□□ 1.72
LRFN4-201ENST00000309602 A0A1W2PP64 1363 aa25.8■■□□□ 1.72
LRFN4-201ENST00000309602 PAK3O75914 559 aaPredicted RBP25.8■■□□□ 1.72
LRFN4-201ENST00000309602 SRPK2P78362 688 aaKnown RBP25.8■■□□□ 1.72
LRFN4-201ENST00000309602 BACH2Q9BYV9 841 aa25.8■■□□□ 1.72
LRFN4-201ENST00000309602 YTHDC2Q9H6S0 1430 aaKnown RBP25.8■■□□□ 1.72
LRFN4-201ENST00000309602 CFAP53Q96M91 514 aa25.79■■□□□ 1.72
LRFN4-201ENST00000309602 RRP7AQ9Y3A4 280 aaKnown RBP25.79■■□□□ 1.72
LRFN4-201ENST00000309602 NEUROD2Q15784 382 aa25.78■■□□□ 1.72
LRFN4-201ENST00000309602 TCP11L2Q8N4U5 519 aa25.78■■□□□ 1.72
LRFN4-201ENST00000309602 PRAM1Q96QH2 718 aa25.78■■□□□ 1.72
LRFN4-201ENST00000309602 NINLQ9Y2I6 1382 aa25.78■■□□□ 1.72
LRFN4-201ENST00000309602 MINK1Q8N4C8 1332 aaPredicted RBP25.77■■□□□ 1.72
LRFN4-201ENST00000309602 ABCC11Q96J66 1382 aa25.77■■□□□ 1.72
LRFN4-201ENST00000309602 CENPQQ7L2Z9 268 aaPredicted RBP25.76■■□□□ 1.71
LRFN4-201ENST00000309602 REREQ9P2R6 1566 aa25.76■■□□□ 1.71
LRFN4-201ENST00000309602 ALKQ9UM73 1620 aa25.76■■□□□ 1.71
LRFN4-201ENST00000309602 PHF23Q9BUL5 403 aaPredicted RBP25.75■■□□□ 1.71
LRFN4-201ENST00000309602 POGKQ9P215 609 aa25.75■■□□□ 1.71
LRFN4-201ENST00000309602 AGLP35573 1532 aa25.75■■□□□ 1.71
LRFN4-201ENST00000309602 ATAD2Q6PL18 1390 aa25.74■■□□□ 1.71
LRFN4-201ENST00000309602 STAG3Q9UJ98 1225 aa25.74■■□□□ 1.71
LRFN4-201ENST00000309602 CLTCQ00610 1675 aaKnown RBP25.73■■□□□ 1.71
LRFN4-201ENST00000309602 NPM2Q86SE8 214 aaKnown RBP25.71■■□□□ 1.71
LRFN4-201ENST00000309602 CD163L1Q9NR16 1453 aa25.71■■□□□ 1.71
LRFN4-201ENST00000309602 GGNBP2Q9H3C7 697 aa25.71■■□□□ 1.71
LRFN4-201ENST00000309602 PPP6R1Q9UPN7 881 aa25.71■■□□□ 1.71
LRFN4-201ENST00000309602 U2AF1L5P0DN76 240 aaPredicted RBP25.69■■□□□ 1.7
LRFN4-201ENST00000309602 U2AF1Q01081 240 aaKnown RBP eCLIP25.69■■□□□ 1.7
LRFN4-201ENST00000309602 WDR63Q8IWG1 891 aa25.69■■□□□ 1.7
LRFN4-201ENST00000309602 CCDC27Q2M243 656 aa25.68■■□□□ 1.7
LRFN4-201ENST00000309602 TERF2IPQ9NYB0 399 aa25.68■■□□□ 1.7
LRFN4-201ENST00000309602 A2ML1A8K2U0 1454 aa25.67■■□□□ 1.7
LRFN4-201ENST00000309602 ZBTB47Q9UFB7 747 aaPredicted RBP25.67■■□□□ 1.7
LRFN4-201ENST00000309602 SPATA31D1Q6ZQQ2 1576 aa25.67■■□□□ 1.7
LRFN4-201ENST00000309602 FYB1O15117 783 aa25.66■■□□□ 1.7
LRFN4-201ENST00000309602 ARHGEF40Q8TER5 1519 aa25.66■■□□□ 1.7
LRFN4-201ENST00000309602 PDE3AQ14432 1141 aa25.66■■□□□ 1.7
LRFN4-201ENST00000309602 CDK19Q9BWU1 502 aa25.66■■□□□ 1.7
LRFN4-201ENST00000309602 NLRP1Q9C000 1473 aa25.66■■□□□ 1.7
LRFN4-201ENST00000309602 DNAJC5Q9H3Z4 198 aa25.65■■□□□ 1.7
LRFN4-201ENST00000309602 ADGRB2O60241 1585 aa25.64■■□□□ 1.7
LRFN4-201ENST00000309602 MLECQ14165 292 aa25.64■■□□□ 1.7
LRFN4-201ENST00000309602 ANKRD26Q9UPS8 1709 aa25.63■■□□□ 1.69
LRFN4-201ENST00000309602 COL3A1P02461 1466 aaPredicted RBP25.63■■□□□ 1.69
LRFN4-201ENST00000309602 MED14O60244 1454 aa25.63■■□□□ 1.69
LRFN4-201ENST00000309602 RARSP54136 660 aaKnown RBP25.63■■□□□ 1.69
LRFN4-201ENST00000309602 NCBP3Q53F19 620 aaKnown RBP25.63■■□□□ 1.69
LRFN4-201ENST00000309602 RIMS2Q9UQ26 1411 aa25.62■■□□□ 1.69
LRFN4-201ENST00000309602 TRHP20396 242 aaPredicted RBP25.62■■□□□ 1.69
LRFN4-201ENST00000309602 CANXP27824 592 aaKnown RBP25.62■■□□□ 1.69
LRFN4-201ENST00000309602 PANK1Q8TE04 598 aa25.62■■□□□ 1.69
LRFN4-201ENST00000309602 HDGFL2Q7Z4V5 671 aaPredicted RBP25.61■■□□□ 1.69
LRFN4-201ENST00000309602 CABP1Q9NZU7 370 aa25.61■■□□□ 1.69
LRFN4-201ENST00000309602 DLC1Q96QB1 1528 aa25.59■■□□□ 1.69
LRFN4-201ENST00000309602 U2SURPO15042 1029 aaKnown RBP25.59■■□□□ 1.69
LRFN4-201ENST00000309602 WAPLQ7Z5K2 1190 aa25.59■■□□□ 1.69
LRFN4-201ENST00000309602 FRAT1Q92837 279 aaPredicted RBP25.59■■□□□ 1.69
LRFN4-201ENST00000309602 COG6Q9Y2V7 657 aa25.59■■□□□ 1.69
LRFN4-201ENST00000309602 SETD1AO15047 1707 aaKnown RBP25.59■■□□□ 1.69
LRFN4-201ENST00000309602 PLEKHF1Q96S99 279 aa25.58■■□□□ 1.69
LRFN4-201ENST00000309602 IGHDP01880 384 aa25.56■■□□□ 1.68
LRFN4-201ENST00000309602 MYH16Q9H6N6 1097 aa25.56■■□□□ 1.68
LRFN4-201ENST00000309602 CLUAP1Q96AJ1 413 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms