RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 AKAP17AQ02040 695 aaKnown RBP13.23□□□□□ -0.29
SYNPO2-201ENST00000307142 HFM1A2PYH4 1435 aa13.23□□□□□ -0.29
SYNPO2-201ENST00000307142 PRXQ9BXM0 1461 aa13.23□□□□□ -0.29
SYNPO2-201ENST00000307142 DENND4BO75064 1496 aaPredicted RBP13.23□□□□□ -0.29
SYNPO2-201ENST00000307142 CCDC27Q2M243 656 aa13.23□□□□□ -0.29
SYNPO2-201ENST00000307142 FANCAO15360 1455 aa13.23□□□□□ -0.29
SYNPO2-201ENST00000307142 HTATSF1O43719 755 aaKnown RBP13.22□□□□□ -0.29
SYNPO2-201ENST00000307142 GNAI1P63096 354 aa13.22□□□□□ -0.29
SYNPO2-201ENST00000307142 FYB1O15117 783 aa13.22□□□□□ -0.29
SYNPO2-201ENST00000307142 PPP6R1Q9UPN7 881 aa13.22□□□□□ -0.29
SYNPO2-201ENST00000307142 MTHFSP49914 203 aa13.22□□□□□ -0.29
SYNPO2-201ENST00000307142 CAMSAP2Q08AD1 1489 aa13.22□□□□□ -0.29
SYNPO2-201ENST00000307142 DHX16O60231 1041 aaKnown RBP13.21□□□□□ -0.29
SYNPO2-201ENST00000307142 SYNE3Q6ZMZ3 975 aa13.21□□□□□ -0.29
SYNPO2-201ENST00000307142 NGLY1Q96IV0 654 aa13.21□□□□□ -0.29
SYNPO2-201ENST00000307142 KIAA1107Q9UPP5 1409 aa13.21□□□□□ -0.3
SYNPO2-201ENST00000307142 RPGRIP1LQ68CZ1 1315 aa13.2□□□□□ -0.3
SYNPO2-201ENST00000307142 ROCK1Q13464 1354 aa13.2□□□□□ -0.3
SYNPO2-201ENST00000307142 NEUROD6Q96NK8 337 aa13.2□□□□□ -0.3
SYNPO2-201ENST00000307142 DIAPH3Q9NSV4 1193 aa13.2□□□□□ -0.3
SYNPO2-201ENST00000307142 PTPN23Q9H3S7 1636 aa13.2□□□□□ -0.3
SYNPO2-201ENST00000307142 NBPF1Q3BBV0 1214 aa13.2□□□□□ -0.3
SYNPO2-201ENST00000307142 TEX14Q8IWB6 1497 aa13.2□□□□□ -0.3
SYNPO2-201ENST00000307142 KIF16BQ96L93 1317 aa13.19□□□□□ -0.3
SYNPO2-201ENST00000307142 KIAA2012Q0VF49 1180 aa13.19□□□□□ -0.3
SYNPO2-201ENST00000307142 FBXO31Q5XUX0 539 aaPredicted RBP13.19□□□□□ -0.3
SYNPO2-201ENST00000307142 CREBRFQ8IUR6 639 aa13.19□□□□□ -0.3
SYNPO2-201ENST00000307142 SLC12A5Q9H2X9 1139 aa13.18□□□□□ -0.3
SYNPO2-201ENST00000307142 WAPLQ7Z5K2 1190 aa13.18□□□□□ -0.3
SYNPO2-201ENST00000307142 CCDC34Q96HJ3 373 aa13.18□□□□□ -0.3
SYNPO2-201ENST00000307142 API5Q9BZZ5 524 aaKnown RBP13.18□□□□□ -0.3
SYNPO2-201ENST00000307142 PRKRIP1Q9H875 184 aaPredicted RBP13.18□□□□□ -0.3
SYNPO2-201ENST00000307142 CTTNBP2Q8WZ74 1663 aa13.17□□□□□ -0.3
SYNPO2-201ENST00000307142 CCDC30Q5VVM6 783 aa13.17□□□□□ -0.3
SYNPO2-201ENST00000307142 SULT6B1Q6IMI4 303 aa13.17□□□□□ -0.3
SYNPO2-201ENST00000307142 ZNF530Q6P9A1 599 aaPredicted RBP13.17□□□□□ -0.3
SYNPO2-201ENST00000307142 FAM135AQ9P2D6 1515 aa13.17□□□□□ -0.3
SYNPO2-201ENST00000307142 NUDT16Q96DE0 195 aaKnown RBP13.17□□□□□ -0.3
SYNPO2-201ENST00000307142 ZNF428Q96B54 188 aa13.16□□□□□ -0.3
SYNPO2-201ENST00000307142 UBAP1LF5GYI3 381 aa13.16□□□□□ -0.3
SYNPO2-201ENST00000307142 RRS1Q15050 365 aaKnown RBP13.16□□□□□ -0.3
SYNPO2-201ENST00000307142 BIVM-ERCC5R4GMW8 1640 aa13.16□□□□□ -0.3
SYNPO2-201ENST00000307142 H3BQV1 296 aa13.16□□□□□ -0.3
SYNPO2-201ENST00000307142 IFFO2Q5TF58 517 aa13.16□□□□□ -0.3
SYNPO2-201ENST00000307142 AMOTL2Q9Y2J4 779 aa13.16□□□□□ -0.3
SYNPO2-201ENST00000307142 COG6Q9Y2V7 657 aa13.16□□□□□ -0.3
SYNPO2-201ENST00000307142 CNTLNQ9NXG0 1405 aa13.16□□□□□ -0.3
SYNPO2-201ENST00000307142 MYL6BP14649 208 aa13.16□□□□□ -0.3
SYNPO2-201ENST00000307142 PRKAR2BP31323 418 aa13.16□□□□□ -0.3
SYNPO2-201ENST00000307142 FOXD4L1Q9NU39 408 aa13.16□□□□□ -0.3
SYNPO2-201ENST00000307142 KIF7Q2M1P5 1343 aa13.15□□□□□ -0.3
SYNPO2-201ENST00000307142 KIF3AQ9Y496 699 aa13.15□□□□□ -0.3
SYNPO2-201ENST00000307142 CHAF1AQ13111 956 aaPredicted RBP13.15□□□□□ -0.3
SYNPO2-201ENST00000307142 FAM184AQ8NB25 1140 aa13.15□□□□□ -0.3
SYNPO2-201ENST00000307142 RAPGEF6Q8TEU7 1601 aa13.15□□□□□ -0.3
SYNPO2-201ENST00000307142 ASXL2Q76L83 1435 aa13.15□□□□□ -0.31
SYNPO2-201ENST00000307142 RUFY2Q8WXA3 655 aa13.14□□□□□ -0.31
SYNPO2-201ENST00000307142 ANKRD30BQ9BXX2 1392 aa13.14□□□□□ -0.31
SYNPO2-201ENST00000307142 ERICH2A1L162 156 aa13.14□□□□□ -0.31
SYNPO2-201ENST00000307142 CCAR1Q8IX12 1150 aaKnown RBP13.14□□□□□ -0.31
SYNPO2-201ENST00000307142 UBTFL1P0CB47 393 aaPredicted RBP13.14□□□□□ -0.31
SYNPO2-201ENST00000307142 TRDNQ13061 729 aa13.14□□□□□ -0.31
SYNPO2-201ENST00000307142 L1TD1Q5T7N2 865 aaKnown RBP13.14□□□□□ -0.31
SYNPO2-201ENST00000307142 DDX19BQ9UMR2 479 aa13.14□□□□□ -0.31
SYNPO2-201ENST00000307142 NOP58Q9Y2X3 529 aaKnown RBP13.14□□□□□ -0.31
SYNPO2-201ENST00000307142 BICDL1Q6ZP65 573 aa13.14□□□□□ -0.31
SYNPO2-201ENST00000307142 ST18O60284 1047 aa13.14□□□□□ -0.31
SYNPO2-201ENST00000307142 SF3A1Q15459 793 aaKnown RBP13.14□□□□□ -0.31
SYNPO2-201ENST00000307142 CNNM1Q9NRU3 951 aa13.14□□□□□ -0.31
SYNPO2-201ENST00000307142 NFXL1Q6ZNB6 911 aa13.13□□□□□ -0.31
SYNPO2-201ENST00000307142 KCNH5Q8NCM2 988 aa13.13□□□□□ -0.31
SYNPO2-201ENST00000307142 CCDC7Q96M83 1385 aa13.13□□□□□ -0.31
SYNPO2-201ENST00000307142 PEG3Q9GZU2 1588 aa13.13□□□□□ -0.31
SYNPO2-201ENST00000307142 DZIP1LQ8IYY4 767 aaKnown RBP13.13□□□□□ -0.31
SYNPO2-201ENST00000307142 WASHC4Q2M389 1173 aa13.13□□□□□ -0.31
SYNPO2-201ENST00000307142 FOXO3O43524 673 aa13.12□□□□□ -0.31
SYNPO2-201ENST00000307142 LRPPRCP42704 1394 aaKnown RBP13.12□□□□□ -0.31
SYNPO2-201ENST00000307142 PRM3Q9NNZ6 103 aa13.12□□□□□ -0.31
SYNPO2-201ENST00000307142 TOM1O60784 492 aa13.12□□□□□ -0.31
SYNPO2-201ENST00000307142 TPM4P67936 248 aa13.12□□□□□ -0.31
SYNPO2-201ENST00000307142 IKQ13123 557 aaPredicted RBP13.12□□□□□ -0.31
SYNPO2-201ENST00000307142 BTBD11A6QL63 1104 aa13.11□□□□□ -0.31
SYNPO2-201ENST00000307142 FOXD4L5Q5VV16 416 aaPredicted RBP13.11□□□□□ -0.31
SYNPO2-201ENST00000307142 FOXD4L4Q8WXT5 416 aaPredicted RBP13.11□□□□□ -0.31
SYNPO2-201ENST00000307142 GBP4Q96PP9 640 aa13.11□□□□□ -0.31
SYNPO2-201ENST00000307142 CFAP65Q6ZU64 1925 aaKnown RBP13.11□□□□□ -0.31
SYNPO2-201ENST00000307142 MTMR7Q9Y216 660 aa13.11□□□□□ -0.31
SYNPO2-201ENST00000307142 RBM5P52756 815 aaKnown RBP eCLIP13.11□□□□□ -0.31
SYNPO2-201ENST00000307142 ANO2Q9NQ90 1003 aa13.11□□□□□ -0.31
SYNPO2-201ENST00000307142 HSP90AB4PQ58FF6 505 aa13.11□□□□□ -0.31
SYNPO2-201ENST00000307142 PBRM1Q86U86 1689 aa13.11□□□□□ -0.31
SYNPO2-201ENST00000307142 CRBNQ96SW2 442 aa13.1□□□□□ -0.31
SYNPO2-201ENST00000307142 CSPP1Q1MSJ5 1256 aa13.1□□□□□ -0.31
SYNPO2-201ENST00000307142 SLKQ9H2G2 1235 aaPredicted RBP13.1□□□□□ -0.31
SYNPO2-201ENST00000307142 TRIM29Q14134 588 aa13.1□□□□□ -0.31
SYNPO2-201ENST00000307142 CCDC61Q9Y6R9 512 aa13.1□□□□□ -0.31
SYNPO2-201ENST00000307142 MSH6P52701 1360 aa13.1□□□□□ -0.31
SYNPO2-201ENST00000307142 HMGB2P26583 209 aaKnown RBP13.1□□□□□ -0.31
SYNPO2-201ENST00000307142 ATAD2Q6PL18 1390 aa13.1□□□□□ -0.31
SYNPO2-201ENST00000307142 ITSN2Q9NZM3 1697 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms