RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 C14orf93Q9H972 538 aaKnown RBP24.53■■□□□ 1.52
TRAPPC1-201ENST00000303731 STK26Q9P289 416 aa24.53■■□□□ 1.52
TRAPPC1-201ENST00000303731 SIRT1Q96EB6 747 aa24.52■■□□□ 1.52
TRAPPC1-201ENST00000303731 PNPLA6Q8IY17 1366 aa24.52■■□□□ 1.52
TRAPPC1-201ENST00000303731 ORAI2Q96SN7 254 aa24.51■■□□□ 1.51
TRAPPC1-201ENST00000303731 SOS2Q07890 1332 aaPredicted RBP24.51■■□□□ 1.51
TRAPPC1-201ENST00000303731 NUTM2BA6NNL0 878 aaPredicted RBP24.5■■□□□ 1.51
TRAPPC1-201ENST00000303731 NUTM2EB1AL46 878 aaPredicted RBP24.5■■□□□ 1.51
TRAPPC1-201ENST00000303731 TMEM132EQ6IEE7 984 aa24.5■■□□□ 1.51
TRAPPC1-201ENST00000303731 NUTM2AQ8IVF1 878 aaPredicted RBP24.5■■□□□ 1.51
TRAPPC1-201ENST00000303731 DHX57Q6P158 1386 aaKnown RBP24.5■■□□□ 1.51
TRAPPC1-201ENST00000303731 DDX17Q92841 729 aaKnown RBP24.49■■□□□ 1.51
TRAPPC1-201ENST00000303731 NPHP3Q7Z494 1330 aa24.48■■□□□ 1.51
TRAPPC1-201ENST00000303731 WAPLQ7Z5K2 1190 aa24.48■■□□□ 1.51
TRAPPC1-201ENST00000303731 STAC3Q96MF2 364 aa24.48■■□□□ 1.51
TRAPPC1-201ENST00000303731 ESCO1Q5FWF5 840 aa24.46■■□□□ 1.51
TRAPPC1-201ENST00000303731 FMN2Q9NZ56 1722 aa24.44■■□□□ 1.5
TRAPPC1-201ENST00000303731 CFAP70Q5T0N1 1121 aa24.44■■□□□ 1.5
TRAPPC1-201ENST00000303731 PLEKHH1Q9ULM0 1364 aa24.43■■□□□ 1.5
TRAPPC1-201ENST00000303731 COL22A1Q8NFW1 1626 aaPredicted RBP24.43■■□□□ 1.5
TRAPPC1-201ENST00000303731 DLC1Q96QB1 1528 aa24.42■■□□□ 1.5
TRAPPC1-201ENST00000303731 KIF1AQ12756 1690 aa24.42■■□□□ 1.5
TRAPPC1-201ENST00000303731 AFF2P51816 1311 aa24.41■■□□□ 1.5
TRAPPC1-201ENST00000303731 PXDNQ92626 1479 aa24.4■■□□□ 1.5
TRAPPC1-201ENST00000303731 CDK12Q9NYV4 1490 aaPredicted RBP24.39■■□□□ 1.5
TRAPPC1-201ENST00000303731 RXRBP28702 533 aa24.39■■□□□ 1.49
TRAPPC1-201ENST00000303731 C8orf37Q96NL8 207 aa24.38■■□□□ 1.49
TRAPPC1-201ENST00000303731 ADGRB1O14514 1584 aa24.37■■□□□ 1.49
TRAPPC1-201ENST00000303731 FOXO3O43524 673 aa24.36■■□□□ 1.49
TRAPPC1-201ENST00000303731 DCAF11Q8TEB1 546 aa24.36■■□□□ 1.49
TRAPPC1-201ENST00000303731 PRAM1Q96QH2 718 aa24.35■■□□□ 1.49
TRAPPC1-201ENST00000303731 NUTM2FA1L443 756 aa24.34■■□□□ 1.49
TRAPPC1-201ENST00000303731 POGKQ9P215 609 aa24.34■■□□□ 1.49
TRAPPC1-201ENST00000303731 ADGRB2O60241 1585 aa24.33■■□□□ 1.49
TRAPPC1-201ENST00000303731 ADAMTS2O95450 1211 aa24.33■■□□□ 1.49
TRAPPC1-201ENST00000303731 NGLY1Q96IV0 654 aa24.33■■□□□ 1.49
TRAPPC1-201ENST00000303731 KDM2AQ9Y2K7 1162 aa24.32■■□□□ 1.48
TRAPPC1-201ENST00000303731 ANKARQ7Z5J8 1434 aa24.3■■□□□ 1.48
TRAPPC1-201ENST00000303731 QTRT2Q9H974 415 aaKnown RBP24.3■■□□□ 1.48
TRAPPC1-201ENST00000303731 EIF3AQ14152 1382 aaKnown RBP24.29■■□□□ 1.48
TRAPPC1-201ENST00000303731 RGPD8O14715 1765 aaPredicted RBP24.29■■□□□ 1.48
TRAPPC1-201ENST00000303731 RBM6P78332 1123 aaKnown RBP24.29■■□□□ 1.48
TRAPPC1-201ENST00000303731 MARF1Q9Y4F3 1742 aaKnown RBP24.29■■□□□ 1.48
TRAPPC1-201ENST00000303731 PHF8Q9UPP1 1060 aa24.28■■□□□ 1.48
TRAPPC1-201ENST00000303731 XPCQ01831 940 aaPredicted RBP24.27■■□□□ 1.48
TRAPPC1-201ENST00000303731 PSME1Q06323 249 aa24.27■■□□□ 1.48
TRAPPC1-201ENST00000303731 SAFB2Q14151 953 aaKnown RBP eCLIP24.27■■□□□ 1.48
TRAPPC1-201ENST00000303731 FNBP4Q8N3X1 1017 aaPredicted RBP24.27■■□□□ 1.48
TRAPPC1-201ENST00000303731 TRAK1Q9UPV9 953 aa24.26■■□□□ 1.47
TRAPPC1-201ENST00000303731 SPATA31A3Q5VYP0 1347 aa24.26■■□□□ 1.47
TRAPPC1-201ENST00000303731 KRT28Q7Z3Y7 464 aa24.25■■□□□ 1.47
TRAPPC1-201ENST00000303731 USP21Q9UK80 565 aa24.25■■□□□ 1.47
TRAPPC1-201ENST00000303731 TRPC5Q9UL62 973 aaPredicted RBP24.24■■□□□ 1.47
TRAPPC1-201ENST00000303731 KIAA1210Q9ULL0 1709 aa24.24■■□□□ 1.47
TRAPPC1-201ENST00000303731 USP32Q8NFA0 1604 aa24.22■■□□□ 1.47
TRAPPC1-201ENST00000303731 TNS3Q68CZ2 1445 aa24.22■■□□□ 1.47
TRAPPC1-201ENST00000303731 SBNO1A3KN83 1393 aa24.22■■□□□ 1.47
TRAPPC1-201ENST00000303731 ARHGEF28Q8N1W1 1705 aaKnown RBP24.21■■□□□ 1.47
TRAPPC1-201ENST00000303731 TULP4Q9NRJ4 1543 aa24.2■■□□□ 1.47
TRAPPC1-201ENST00000303731 RGS12O14924 1447 aa24.2■■□□□ 1.46
TRAPPC1-201ENST00000303731 ARHGEF10O15013 1369 aa24.19■■□□□ 1.46
TRAPPC1-201ENST00000303731 ATRNO75882 1429 aa24.18■■□□□ 1.46
TRAPPC1-201ENST00000303731 UPF1Q92900 1129 aaKnown RBP eCLIP24.18■■□□□ 1.46
TRAPPC1-201ENST00000303731 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.18■■□□□ 1.46
TRAPPC1-201ENST00000303731 MINK1Q8N4C8 1332 aaPredicted RBP24.17■■□□□ 1.46
TRAPPC1-201ENST00000303731 WASLO00401 505 aaPredicted RBP24.17■■□□□ 1.46
TRAPPC1-201ENST00000303731 HIRIP3Q9BW71 556 aaPredicted RBP24.17■■□□□ 1.46
TRAPPC1-201ENST00000303731 BCL9LQ86UU0 1499 aa24.15■■□□□ 1.46
TRAPPC1-201ENST00000303731 ITSN1Q15811 1721 aa24.15■■□□□ 1.46
TRAPPC1-201ENST00000303731 GPRASP1Q5JY77 1395 aa24.14■■□□□ 1.45
TRAPPC1-201ENST00000303731 HAP1P54257 671 aaPredicted RBP24.13■■□□□ 1.45
TRAPPC1-201ENST00000303731 PMFBP1Q8TBY8 1022 aa24.13■■□□□ 1.45
TRAPPC1-201ENST00000303731 SLIT2O94813 1529 aa24.12■■□□□ 1.45
TRAPPC1-201ENST00000303731 ABCA3Q99758 1704 aa24.11■■□□□ 1.45
TRAPPC1-201ENST00000303731 TRPM3Q9HCF6 1732 aaPredicted RBP24.11■■□□□ 1.45
TRAPPC1-201ENST00000303731 PRR36Q9H6K5 1346 aa24.1■■□□□ 1.45
TRAPPC1-201ENST00000303731 LMOD2Q6P5Q4 547 aa24.09■■□□□ 1.45
TRAPPC1-201ENST00000303731 UNC5CLQ8IV45 518 aa24.09■■□□□ 1.45
TRAPPC1-201ENST00000303731 ATAD2Q6PL18 1390 aa24.08■■□□□ 1.45
TRAPPC1-201ENST00000303731 NWD2Q9ULI1 1742 aa24.08■■□□□ 1.45
TRAPPC1-201ENST00000303731 ALS2Q96Q42 1657 aa24.08■■□□□ 1.44
TRAPPC1-201ENST00000303731 ATP7BP35670 1465 aa24.07■■□□□ 1.44
TRAPPC1-201ENST00000303731 NGDNQ8NEJ9 315 aaKnown RBP24.07■■□□□ 1.44
TRAPPC1-201ENST00000303731 GJD4Q96KN9 370 aaPredicted RBP24.07■■□□□ 1.44
TRAPPC1-201ENST00000303731 NUDT16Q96DE0 195 aaKnown RBP24.05■■□□□ 1.44
TRAPPC1-201ENST00000303731 CABLES1Q8TDN4 633 aa24.04■■□□□ 1.44
TRAPPC1-201ENST00000303731 PLCH1Q4KWH8 1693 aa24.04■■□□□ 1.44
TRAPPC1-201ENST00000303731 CDK19Q9BWU1 502 aa24.02■■□□□ 1.44
TRAPPC1-201ENST00000303731 TOPAZ1Q8N9V7 1692 aa24.02■■□□□ 1.44
TRAPPC1-201ENST00000303731 RALGAPBQ86X10 1494 aa24.01■■□□□ 1.43
TRAPPC1-201ENST00000303731 NBPF1Q3BBV0 1214 aa24.01■■□□□ 1.43
TRAPPC1-201ENST00000303731 GLI3P10071 1580 aa23.99■■□□□ 1.43
TRAPPC1-201ENST00000303731 VPS72Q15906 364 aa23.99■■□□□ 1.43
TRAPPC1-201ENST00000303731 L3MBTL2Q969R5 705 aa23.99■■□□□ 1.43
TRAPPC1-201ENST00000303731 CCDC61Q9Y6R9 512 aa23.99■■□□□ 1.43
TRAPPC1-201ENST00000303731 CENPJQ9HC77 1338 aaPredicted RBP23.99■■□□□ 1.43
TRAPPC1-201ENST00000303731 POLR3AO14802 1390 aaPredicted RBP23.98■■□□□ 1.43
TRAPPC1-201ENST00000303731 PAK3O75914 559 aaPredicted RBP23.97■■□□□ 1.43
TRAPPC1-201ENST00000303731 COL14A1Q05707 1796 aaKnown RBP23.97■■□□□ 1.43
TRAPPC1-201ENST00000303731 CRYBG1Q9Y4K1 1723 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms