RNA–Protein interactions for RNA: ENST00000303436.10

ARF4-201, Transcript of ADP ribosylation factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARF4, Length 1,660 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF4-201ENST00000303436 HIRIP3Q9BW71 556 aaPredicted RBP18.65■□□□□ 0.58
ARF4-201ENST00000303436 NCOA3Q9Y6Q9 1424 aa18.64■□□□□ 0.57
ARF4-201ENST00000303436 LRRC7Q96NW7 1537 aa18.64■□□□□ 0.57
ARF4-201ENST00000303436 SBNO2Q9Y2G9 1366 aa18.63■□□□□ 0.57
ARF4-201ENST00000303436 LTBP4Q8N2S1 1624 aa18.63■□□□□ 0.57
ARF4-201ENST00000303436 ADGRL3Q9HAR2 1447 aa18.61■□□□□ 0.57
ARF4-201ENST00000303436 TMF1P82094 1093 aa18.61■□□□□ 0.57
ARF4-201ENST00000303436 TESK2Q96S53 571 aa18.61■□□□□ 0.57
ARF4-201ENST00000303436 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.61■□□□□ 0.57
ARF4-201ENST00000303436 EVC2Q86UK5 1308 aa18.6■□□□□ 0.57
ARF4-201ENST00000303436 C19orf44Q9H6X5 657 aa18.6■□□□□ 0.57
ARF4-201ENST00000303436 MSH6P52701 1360 aa18.6■□□□□ 0.57
ARF4-201ENST00000303436 NALCNQ8IZF0 1738 aa18.58■□□□□ 0.57
ARF4-201ENST00000303436 WASLO00401 505 aaPredicted RBP18.57■□□□□ 0.56
ARF4-201ENST00000303436 CDCA8Q53HL2 280 aa18.57■□□□□ 0.56
ARF4-201ENST00000303436 ADGRB2O60241 1585 aa18.57■□□□□ 0.56
ARF4-201ENST00000303436 XIRP1Q702N8 1843 aaKnown RBP18.57■□□□□ 0.56
ARF4-201ENST00000303436 ATF3P18847 181 aa18.57■□□□□ 0.56
ARF4-201ENST00000303436 SRPK2P78362 688 aaKnown RBP18.57■□□□□ 0.56
ARF4-201ENST00000303436 CDK19Q9BWU1 502 aa18.56■□□□□ 0.56
ARF4-201ENST00000303436 CDC42BPGQ6DT37 1551 aa18.55■□□□□ 0.56
ARF4-201ENST00000303436 DCCP43146 1447 aa18.55■□□□□ 0.56
ARF4-201ENST00000303436 CADPS2Q86UW7 1296 aa18.54■□□□□ 0.56
ARF4-201ENST00000303436 TULP4Q9NRJ4 1543 aa18.54■□□□□ 0.56
ARF4-201ENST00000303436 DISP3Q9P2K9 1392 aa18.54■□□□□ 0.56
ARF4-201ENST00000303436 CABP2Q9NPB3 220 aa18.53■□□□□ 0.56
ARF4-201ENST00000303436 POLR3GLQ9BT43 218 aa18.52■□□□□ 0.56
ARF4-201ENST00000303436 PUS7Q96PZ0 661 aaKnown RBP18.51■□□□□ 0.55
ARF4-201ENST00000303436 NUTM2FA1L443 756 aa18.5■□□□□ 0.55
ARF4-201ENST00000303436 ZNF316A6NFI3 1004 aaPredicted RBP18.5■□□□□ 0.55
ARF4-201ENST00000303436 CERKQ8TCT0 537 aa18.5■□□□□ 0.55
ARF4-201ENST00000303436 FMN2Q9NZ56 1722 aa18.49■□□□□ 0.55
ARF4-201ENST00000303436 ATAD2Q6PL18 1390 aa18.49■□□□□ 0.55
ARF4-201ENST00000303436 NUDT16Q96DE0 195 aaKnown RBP18.49■□□□□ 0.55
ARF4-201ENST00000303436 IQSEC2Q5JU85 1478 aa18.49■□□□□ 0.55
ARF4-201ENST00000303436 ANKARQ7Z5J8 1434 aa18.48■□□□□ 0.55
ARF4-201ENST00000303436 C11orf95C9JLR9 678 aaPredicted RBP18.48■□□□□ 0.55
ARF4-201ENST00000303436 KIF7Q2M1P5 1343 aa18.47■□□□□ 0.55
ARF4-201ENST00000303436 CCDC61Q9Y6R9 512 aa18.47■□□□□ 0.55
ARF4-201ENST00000303436 CCDC7Q96M83 1385 aa18.46■□□□□ 0.55
ARF4-201ENST00000303436 TMC1Q8TDI8 760 aa18.45■□□□□ 0.54
ARF4-201ENST00000303436 SLAIN2Q9P270 581 aa18.45■□□□□ 0.54
ARF4-201ENST00000303436 WASHC2AQ641Q2 1341 aa18.45■□□□□ 0.54
ARF4-201ENST00000303436 MST1RQ04912 1400 aa18.45■□□□□ 0.54
ARF4-201ENST00000303436 ATP7BP35670 1465 aa18.45■□□□□ 0.54
ARF4-201ENST00000303436 TOM1O60784 492 aa18.44■□□□□ 0.54
ARF4-201ENST00000303436 PRR36Q9H6K5 1346 aa18.44■□□□□ 0.54
ARF4-201ENST00000303436 C1orf167Q5SNV9 1468 aa18.44■□□□□ 0.54
ARF4-201ENST00000303436 ESCO1Q5FWF5 840 aa18.44■□□□□ 0.54
ARF4-201ENST00000303436 NINLQ9Y2I6 1382 aa18.43■□□□□ 0.54
ARF4-201ENST00000303436 ITSN1Q15811 1721 aa18.43■□□□□ 0.54
ARF4-201ENST00000303436 PPIP5K1Q6PFW1 1433 aa18.42■□□□□ 0.54
ARF4-201ENST00000303436 USP32Q8NFA0 1604 aa18.42■□□□□ 0.54
ARF4-201ENST00000303436 RGPD8O14715 1765 aaPredicted RBP18.42■□□□□ 0.54
ARF4-201ENST00000303436 UBAP1LF5GYI3 381 aa18.41■□□□□ 0.54
ARF4-201ENST00000303436 CABP1Q9NZU7 370 aa18.41■□□□□ 0.54
ARF4-201ENST00000303436 ORAI2Q96SN7 254 aa18.4■□□□□ 0.54
ARF4-201ENST00000303436 PHF8Q9UPP1 1060 aa18.4■□□□□ 0.54
ARF4-201ENST00000303436 TOPAZ1Q8N9V7 1692 aa18.39■□□□□ 0.53
ARF4-201ENST00000303436 PMFBP1Q8TBY8 1022 aa18.39■□□□□ 0.53
ARF4-201ENST00000303436 SLC12A5Q9H2X9 1139 aa18.39■□□□□ 0.53
ARF4-201ENST00000303436 PLEKHG3A1L390 1219 aa18.38■□□□□ 0.53
ARF4-201ENST00000303436 NGDNQ8NEJ9 315 aaKnown RBP18.38■□□□□ 0.53
ARF4-201ENST00000303436 TERF2IPQ9NYB0 399 aa18.38■□□□□ 0.53
ARF4-201ENST00000303436 HDGFL2Q7Z4V5 671 aaPredicted RBP18.38■□□□□ 0.53
ARF4-201ENST00000303436 SCAF1Q9H7N4 1312 aaKnown RBP18.36■□□□□ 0.53
ARF4-201ENST00000303436 KIF1AQ12756 1690 aa18.36■□□□□ 0.53
ARF4-201ENST00000303436 PIP4K2BP78356 416 aa18.36■□□□□ 0.53
ARF4-201ENST00000303436 BRINP3Q76B58 766 aa18.36■□□□□ 0.53
ARF4-201ENST00000303436 MYOM1P52179 1685 aa18.36■□□□□ 0.53
ARF4-201ENST00000303436 ACEP12821 1306 aa18.36■□□□□ 0.53
ARF4-201ENST00000303436 ZNF692Q9BU19 519 aaPredicted RBP18.34■□□□□ 0.53
ARF4-201ENST00000303436 ANKRD36BQ8N2N9 1353 aa18.34■□□□□ 0.53
ARF4-201ENST00000303436 POLR3AO14802 1390 aaPredicted RBP18.33■□□□□ 0.52
ARF4-201ENST00000303436 FOXO3O43524 673 aa18.33■□□□□ 0.52
ARF4-201ENST00000303436 PSME1Q06323 249 aa18.33■□□□□ 0.52
ARF4-201ENST00000303436 DDX10Q13206 875 aaKnown RBP18.33■□□□□ 0.52
ARF4-201ENST00000303436 PANK3Q9H999 370 aa18.32■□□□□ 0.52
ARF4-201ENST00000303436 NPHP3Q7Z494 1330 aa18.32■□□□□ 0.52
ARF4-201ENST00000303436 A0A1W2PP64 1363 aa18.32■□□□□ 0.52
ARF4-201ENST00000303436 KTN1Q86UP2 1357 aaKnown RBP18.32■□□□□ 0.52
ARF4-201ENST00000303436 ROBO1Q9Y6N7 1651 aa18.32■□□□□ 0.52
ARF4-201ENST00000303436 CPSF1Q10570 1443 aaKnown RBP18.31■□□□□ 0.52
ARF4-201ENST00000303436 CD163L1Q9NR16 1453 aa18.3■□□□□ 0.52
ARF4-201ENST00000303436 AKAP12Q02952 1782 aa18.28■□□□□ 0.52
ARF4-201ENST00000303436 KRT28Q7Z3Y7 464 aa18.28■□□□□ 0.52
ARF4-201ENST00000303436 USP6P35125 1406 aa18.28■□□□□ 0.52
ARF4-201ENST00000303436 DDX17Q92841 729 aaKnown RBP18.28■□□□□ 0.52
ARF4-201ENST00000303436 XPCQ01831 940 aaPredicted RBP18.27■□□□□ 0.52
ARF4-201ENST00000303436 KNSTRNQ9Y448 316 aa18.27■□□□□ 0.52
ARF4-201ENST00000303436 BRD4O60885 1362 aaPredicted RBP18.27■□□□□ 0.51
ARF4-201ENST00000303436 PAK3O75914 559 aaPredicted RBP18.26■□□□□ 0.51
ARF4-201ENST00000303436 EDC4Q6P2E9 1401 aaKnown RBP18.26■□□□□ 0.51
ARF4-201ENST00000303436 MON2Q7Z3U7 1717 aa18.26■□□□□ 0.51
ARF4-201ENST00000303436 CARD14Q9BXL6 1004 aa18.25■□□□□ 0.51
ARF4-201ENST00000303436 NSD3Q9BZ95 1437 aa18.25■□□□□ 0.51
ARF4-201ENST00000303436 NHSL1Q5SYE7 1610 aa18.25■□□□□ 0.51
ARF4-201ENST00000303436 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.24■□□□□ 0.51
ARF4-201ENST00000303436 AHDC1Q5TGY3 1603 aaPredicted RBP18.23■□□□□ 0.51
ARF4-201ENST00000303436 TTC21BQ7Z4L5 1316 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms