RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 EXOSC9Q06265 439 aaKnown RBP20.06■□□□□ 0.8
BRD3-201ENST00000303407 TOMM22Q9NS69 142 aa20.06■□□□□ 0.8
BRD3-201ENST00000303407 PLB1Q6P1J6 1458 aa20.05■□□□□ 0.8
BRD3-201ENST00000303407 BCAR3O75815 825 aa20.05■□□□□ 0.8
BRD3-201ENST00000303407 PRKAR2BP31323 418 aa20.05■□□□□ 0.8
BRD3-201ENST00000303407 NUTM2GQ5VZR2 741 aa20.05■□□□□ 0.8
BRD3-201ENST00000303407 EVA1CP58658 441 aa20.05■□□□□ 0.8
BRD3-201ENST00000303407 ANO2Q9NQ90 1003 aa20.04■□□□□ 0.8
BRD3-201ENST00000303407 ATP6V1DQ9Y5K8 247 aa20.04■□□□□ 0.8
BRD3-201ENST00000303407 DDX58O95786 925 aaKnown RBP20.03■□□□□ 0.8
BRD3-201ENST00000303407 FAM184AQ8NB25 1140 aa20.03■□□□□ 0.8
BRD3-201ENST00000303407 CDK19Q9BWU1 502 aa20.02■□□□□ 0.8
BRD3-201ENST00000303407 ARID3AQ99856 593 aa20.02■□□□□ 0.8
BRD3-201ENST00000303407 TSR2Q969E8 191 aaKnown RBP20.01■□□□□ 0.79
BRD3-201ENST00000303407 GRIN2AQ12879 1464 aa20.01■□□□□ 0.79
BRD3-201ENST00000303407 PDE3AQ14432 1141 aa20.01■□□□□ 0.79
BRD3-201ENST00000303407 SF3A1Q15459 793 aaKnown RBP20.01■□□□□ 0.79
BRD3-201ENST00000303407 URB2Q14146 1524 aaKnown RBP20.01■□□□□ 0.79
BRD3-201ENST00000303407 CDC45O75419 566 aa20.01■□□□□ 0.79
BRD3-201ENST00000303407 NOB1Q9ULX3 412 aaKnown RBP20■□□□□ 0.79
BRD3-201ENST00000303407 PDZRN3Q9UPQ7 1066 aa20■□□□□ 0.79
BRD3-201ENST00000303407 CCDC34Q96HJ3 373 aa20■□□□□ 0.79
BRD3-201ENST00000303407 ZKSCAN1P17029 563 aaPredicted RBP20■□□□□ 0.79
BRD3-201ENST00000303407 C11orf95C9JLR9 678 aaPredicted RBP19.99■□□□□ 0.79
BRD3-201ENST00000303407 FRAT2O75474 233 aaPredicted RBP19.99■□□□□ 0.79
BRD3-201ENST00000303407 G3BP1Q13283 466 aaKnown RBP eCLIP19.99■□□□□ 0.79
BRD3-201ENST00000303407 NLRP6P59044 892 aa19.99■□□□□ 0.79
BRD3-201ENST00000303407 TMX4Q9H1E5 349 aaPredicted RBP19.99■□□□□ 0.79
BRD3-201ENST00000303407 TXNDC2Q86VQ3 553 aa19.98■□□□□ 0.79
BRD3-201ENST00000303407 GTF2E1P29083 439 aaPredicted RBP19.98■□□□□ 0.79
BRD3-201ENST00000303407 NFKBIBQ15653 356 aa19.98■□□□□ 0.79
BRD3-201ENST00000303407 CABP1Q9NZU7 370 aa19.98■□□□□ 0.79
BRD3-201ENST00000303407 CLSTN1O94985 981 aa19.98■□□□□ 0.79
BRD3-201ENST00000303407 RPGRIP1LQ68CZ1 1315 aa19.97■□□□□ 0.79
BRD3-201ENST00000303407 TWISTNBQ3B726 338 aaPredicted RBP19.97■□□□□ 0.79
BRD3-201ENST00000303407 WDR63Q8IWG1 891 aa19.97■□□□□ 0.79
BRD3-201ENST00000303407 NINLQ9Y2I6 1382 aa19.96■□□□□ 0.79
BRD3-201ENST00000303407 HSP90AB4PQ58FF6 505 aa19.96■□□□□ 0.79
BRD3-201ENST00000303407 UBTFL1P0CB47 393 aaPredicted RBP19.96■□□□□ 0.79
BRD3-201ENST00000303407 C1orf115Q9H7X2 142 aa19.96■□□□□ 0.79
BRD3-201ENST00000303407 RASSF8Q8NHQ8 419 aa19.95■□□□□ 0.78
BRD3-201ENST00000303407 CHMP4CQ96CF2 233 aa19.95■□□□□ 0.78
BRD3-201ENST00000303407 LRRFIP1Q32MZ4 808 aaKnown RBP19.94■□□□□ 0.78
BRD3-201ENST00000303407 SLC52A1Q9NWF4 448 aa19.94■□□□□ 0.78
BRD3-201ENST00000303407 GAS2L2Q8NHY3 880 aa19.94■□□□□ 0.78
BRD3-201ENST00000303407 NSD3Q9BZ95 1437 aa19.94■□□□□ 0.78
BRD3-201ENST00000303407 ERC2O15083 957 aa19.94■□□□□ 0.78
BRD3-201ENST00000303407 MCTP1Q6DN14 999 aa19.94■□□□□ 0.78
BRD3-201ENST00000303407 RAPGEF4Q8WZA2 1011 aa19.94■□□□□ 0.78
BRD3-201ENST00000303407 RAPGEF3O95398 923 aa19.93■□□□□ 0.78
BRD3-201ENST00000303407 CCDC30Q5VVM6 783 aa19.93■□□□□ 0.78
BRD3-201ENST00000303407 NUCB2P80303 420 aa19.93■□□□□ 0.78
BRD3-201ENST00000303407 AIMP1Q12904 312 aaKnown RBP19.93■□□□□ 0.78
BRD3-201ENST00000303407 RNF20Q5VTR2 975 aa19.92■□□□□ 0.78
BRD3-201ENST00000303407 RIC3Q7Z5B4 369 aa19.92■□□□□ 0.78
BRD3-201ENST00000303407 ABTB2Q8N961 1025 aa19.92■□□□□ 0.78
BRD3-201ENST00000303407 RTEL1-TNFRSF6BF6WH68 1400 aa19.92■□□□□ 0.78
BRD3-201ENST00000303407 CREBRFQ8IUR6 639 aa19.91■□□□□ 0.78
BRD3-201ENST00000303407 NCOA1Q15788 1441 aa19.91■□□□□ 0.78
BRD3-201ENST00000303407 GCC1Q96CN9 775 aa19.9■□□□□ 0.78
BRD3-201ENST00000303407 BACH2Q9BYV9 841 aa19.9■□□□□ 0.78
BRD3-201ENST00000303407 THOC2Q8NI27 1593 aaKnown RBP19.9■□□□□ 0.78
BRD3-201ENST00000303407 RPRD2Q5VT52 1461 aaKnown RBP19.9■□□□□ 0.78
BRD3-201ENST00000303407 G3V3G9 751 aa19.9■□□□□ 0.78
BRD3-201ENST00000303407 ATF3P18847 181 aa19.9■□□□□ 0.78
BRD3-201ENST00000303407 DCAF8Q5TAQ9 597 aa19.9■□□□□ 0.78
BRD3-201ENST00000303407 CT47B1P0C2W7 299 aaPredicted RBP19.89■□□□□ 0.77
BRD3-201ENST00000303407 SMC3Q9UQE7 1217 aa19.89■□□□□ 0.77
BRD3-201ENST00000303407 NLRP2Q9NX02 1062 aa19.89■□□□□ 0.77
BRD3-201ENST00000303407 GOLGA6L19H0YKK7 550 aa19.89■□□□□ 0.77
BRD3-201ENST00000303407 SLFN5Q08AF3 891 aa19.88■□□□□ 0.77
BRD3-201ENST00000303407 GPRASP1Q5JY77 1395 aa19.88■□□□□ 0.77
BRD3-201ENST00000303407 ATAD2Q6PL18 1390 aa19.88■□□□□ 0.77
BRD3-201ENST00000303407 GNAI3P08754 354 aa19.88■□□□□ 0.77
BRD3-201ENST00000303407 MVPQ14764 893 aaKnown RBP19.88■□□□□ 0.77
BRD3-201ENST00000303407 SULT6B1Q6IMI4 303 aa19.88■□□□□ 0.77
BRD3-201ENST00000303407 FAM135AQ9P2D6 1515 aa19.88■□□□□ 0.77
BRD3-201ENST00000303407 SYNE3Q6ZMZ3 975 aa19.88■□□□□ 0.77
BRD3-201ENST00000303407 ZNF692Q9BU19 519 aaPredicted RBP19.88■□□□□ 0.77
BRD3-201ENST00000303407 DNAJC5BQ9UF47 199 aa19.88■□□□□ 0.77
BRD3-201ENST00000303407 ESCO1Q5FWF5 840 aa19.86■□□□□ 0.77
BRD3-201ENST00000303407 SYTL4Q96C24 671 aaPredicted RBP19.86■□□□□ 0.77
BRD3-201ENST00000303407 VPS37CA5D8V6 355 aaPredicted RBP19.86■□□□□ 0.77
BRD3-201ENST00000303407 AKAP17AQ02040 695 aaKnown RBP19.86■□□□□ 0.77
BRD3-201ENST00000303407 RSPH6AQ9H0K4 717 aa19.86■□□□□ 0.77
BRD3-201ENST00000303407 ATF7IPQ6VMQ6 1270 aa19.86■□□□□ 0.77
BRD3-201ENST00000303407 WWC1Q8IX03 1113 aa19.86■□□□□ 0.77
BRD3-201ENST00000303407 MAPKBP1O60336 1514 aa19.85■□□□□ 0.77
BRD3-201ENST00000303407 BECN2A8MW95 431 aa19.85■□□□□ 0.77
BRD3-201ENST00000303407 APPP05067 770 aa19.85■□□□□ 0.77
BRD3-201ENST00000303407 CNTROBQ8N137 903 aa19.85■□□□□ 0.77
BRD3-201ENST00000303407 SLC4A2P04920 1241 aa19.85■□□□□ 0.77
BRD3-201ENST00000303407 ZNF608Q9ULD9 1512 aaPredicted RBP19.84■□□□□ 0.77
BRD3-201ENST00000303407 PLEKHO1Q53GL0 409 aaPredicted RBP19.83■□□□□ 0.77
BRD3-201ENST00000303407 SURF6O75683 361 aaKnown RBP19.83■□□□□ 0.76
BRD3-201ENST00000303407 GNAI2P04899 355 aa19.83■□□□□ 0.76
BRD3-201ENST00000303407 TRIM29Q14134 588 aa19.83■□□□□ 0.76
BRD3-201ENST00000303407 ADGRL1O94910 1474 aa19.82■□□□□ 0.76
BRD3-201ENST00000303407 UGGT2Q9NYU1 1516 aa19.82■□□□□ 0.76
BRD3-201ENST00000303407 CPLX1O14810 134 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms