RNA–Protein interactions for RNA: ENST00000301323.7

RECQL4-201, Transcript of RecQ like helicase 4, humanhuman

TSL 3

Gene RECQL4, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL4-201ENST00000301323 CFAP70Q5T0N1 1121 aa24.09■■□□□ 1.45
RECQL4-201ENST00000301323 RGS17Q9UGC6 210 aaPredicted RBP24.09■■□□□ 1.45
RECQL4-201ENST00000301323 DLC1Q96QB1 1528 aa24.09■■□□□ 1.45
RECQL4-201ENST00000301323 FMN2Q9NZ56 1722 aa24.07■■□□□ 1.44
RECQL4-201ENST00000301323 WAPLQ7Z5K2 1190 aa24.07■■□□□ 1.44
RECQL4-201ENST00000301323 SPATA31A6Q5VVP1 1343 aa24.06■■□□□ 1.44
RECQL4-201ENST00000301323 DCAF11Q8TEB1 546 aa24.03■■□□□ 1.44
RECQL4-201ENST00000301323 DDX17Q92841 729 aaKnown RBP24.03■■□□□ 1.44
RECQL4-201ENST00000301323 SIRT1Q96EB6 747 aa24.03■■□□□ 1.44
RECQL4-201ENST00000301323 ORAI2Q96SN7 254 aa24.02■■□□□ 1.44
RECQL4-201ENST00000301323 ADGRB2O60241 1585 aa24.01■■□□□ 1.43
RECQL4-201ENST00000301323 STAC3Q96MF2 364 aa24.01■■□□□ 1.43
RECQL4-201ENST00000301323 PNPLA6Q8IY17 1366 aa24■■□□□ 1.43
RECQL4-201ENST00000301323 KDM2AQ9Y2K7 1162 aa23.99■■□□□ 1.43
RECQL4-201ENST00000301323 SOS2Q07890 1332 aaPredicted RBP23.98■■□□□ 1.43
RECQL4-201ENST00000301323 KIF1AQ12756 1690 aa23.98■■□□□ 1.43
RECQL4-201ENST00000301323 POTEAQ6S8J7 498 aa23.97■■□□□ 1.43
RECQL4-201ENST00000301323 ARHGEF28Q8N1W1 1705 aaKnown RBP23.97■■□□□ 1.43
RECQL4-201ENST00000301323 PXDNQ92626 1479 aa23.97■■□□□ 1.43
RECQL4-201ENST00000301323 KIAA1210Q9ULL0 1709 aa23.97■■□□□ 1.43
RECQL4-201ENST00000301323 LRRC59Q96AG4 307 aaKnown RBP23.96■■□□□ 1.43
RECQL4-201ENST00000301323 PRAM1Q96QH2 718 aa23.96■■□□□ 1.43
RECQL4-201ENST00000301323 COL22A1Q8NFW1 1626 aaPredicted RBP23.95■■□□□ 1.42
RECQL4-201ENST00000301323 USP32Q8NFA0 1604 aa23.93■■□□□ 1.42
RECQL4-201ENST00000301323 ESCO1Q5FWF5 840 aa23.92■■□□□ 1.42
RECQL4-201ENST00000301323 RGPD8O14715 1765 aaPredicted RBP23.92■■□□□ 1.42
RECQL4-201ENST00000301323 NPHP3Q7Z494 1330 aa23.91■■□□□ 1.42
RECQL4-201ENST00000301323 NUTM2FA1L443 756 aa23.91■■□□□ 1.42
RECQL4-201ENST00000301323 SAFB2Q14151 953 aaKnown RBP eCLIP23.89■■□□□ 1.41
RECQL4-201ENST00000301323 TRAK1Q9UPV9 953 aa23.89■■□□□ 1.41
RECQL4-201ENST00000301323 MEX3CQ5U5Q3 659 aaKnown RBP23.88■■□□□ 1.41
RECQL4-201ENST00000301323 ANKARQ7Z5J8 1434 aa23.87■■□□□ 1.41
RECQL4-201ENST00000301323 POGKQ9P215 609 aa23.87■■□□□ 1.41
RECQL4-201ENST00000301323 NUTM2BA6NNL0 878 aaPredicted RBP23.86■■□□□ 1.41
RECQL4-201ENST00000301323 NUTM2EB1AL46 878 aaPredicted RBP23.86■■□□□ 1.41
RECQL4-201ENST00000301323 NUTM2AQ8IVF1 878 aaPredicted RBP23.86■■□□□ 1.41
RECQL4-201ENST00000301323 TULP4Q9NRJ4 1543 aa23.85■■□□□ 1.41
RECQL4-201ENST00000301323 FOXO3O43524 673 aa23.85■■□□□ 1.41
RECQL4-201ENST00000301323 XPCQ01831 940 aaPredicted RBP23.82■■□□□ 1.4
RECQL4-201ENST00000301323 MINK1Q8N4C8 1332 aaPredicted RBP23.81■■□□□ 1.4
RECQL4-201ENST00000301323 EIF3AQ14152 1382 aaKnown RBP23.8■■□□□ 1.4
RECQL4-201ENST00000301323 ZNF772Q68DY9 489 aaPredicted RBP23.8■■□□□ 1.4
RECQL4-201ENST00000301323 HIRIP3Q9BW71 556 aaPredicted RBP23.8■■□□□ 1.4
RECQL4-201ENST00000301323 L3MBTL2Q969R5 705 aa23.79■■□□□ 1.4
RECQL4-201ENST00000301323 SIN3AQ96ST3 1273 aa23.79■■□□□ 1.4
RECQL4-201ENST00000301323 PHF8Q9UPP1 1060 aa23.79■■□□□ 1.4
RECQL4-201ENST00000301323 TRPM1Q7Z4N2 1603 aa23.79■■□□□ 1.4
RECQL4-201ENST00000301323 AFF2P51816 1311 aa23.79■■□□□ 1.4
RECQL4-201ENST00000301323 ATP7BP35670 1465 aa23.78■■□□□ 1.4
RECQL4-201ENST00000301323 MARF1Q9Y4F3 1742 aaKnown RBP23.78■■□□□ 1.4
RECQL4-201ENST00000301323 PRR36Q9H6K5 1346 aa23.78■■□□□ 1.4
RECQL4-201ENST00000301323 NBPF1Q3BBV0 1214 aa23.77■■□□□ 1.4
RECQL4-201ENST00000301323 TNS3Q68CZ2 1445 aa23.76■■□□□ 1.39
RECQL4-201ENST00000301323 ITSN1Q15811 1721 aa23.76■■□□□ 1.39
RECQL4-201ENST00000301323 TRPM3Q9HCF6 1732 aaPredicted RBP23.76■■□□□ 1.39
RECQL4-201ENST00000301323 SPATA31A3Q5VYP0 1347 aa23.76■■□□□ 1.39
RECQL4-201ENST00000301323 WASLO00401 505 aaPredicted RBP23.75■■□□□ 1.39
RECQL4-201ENST00000301323 TRIM26Q12899 539 aaPredicted RBP23.75■■□□□ 1.39
RECQL4-201ENST00000301323 C8orf37Q96NL8 207 aa23.75■■□□□ 1.39
RECQL4-201ENST00000301323 TOPAZ1Q8N9V7 1692 aa23.75■■□□□ 1.39
RECQL4-201ENST00000301323 ABCA3Q99758 1704 aa23.75■■□□□ 1.39
RECQL4-201ENST00000301323 ADAMTS2O95450 1211 aa23.73■■□□□ 1.39
RECQL4-201ENST00000301323 SBNO1A3KN83 1393 aa23.73■■□□□ 1.39
RECQL4-201ENST00000301323 KRT28Q7Z3Y7 464 aa23.72■■□□□ 1.39
RECQL4-201ENST00000301323 QRICH2Q9H0J4 1663 aa23.72■■□□□ 1.39
RECQL4-201ENST00000301323 ALS2Q96Q42 1657 aa23.7■■□□□ 1.39
RECQL4-201ENST00000301323 CDK12Q9NYV4 1490 aaPredicted RBP23.7■■□□□ 1.38
RECQL4-201ENST00000301323 NEUROD1Q13562 356 aa23.7■■□□□ 1.38
RECQL4-201ENST00000301323 PMFBP1Q8TBY8 1022 aa23.69■■□□□ 1.38
RECQL4-201ENST00000301323 NGLY1Q96IV0 654 aa23.67■■□□□ 1.38
RECQL4-201ENST00000301323 PSME1Q06323 249 aa23.66■■□□□ 1.38
RECQL4-201ENST00000301323 ARHGEF10O15013 1369 aa23.65■■□□□ 1.38
RECQL4-201ENST00000301323 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.65■■□□□ 1.38
RECQL4-201ENST00000301323 FNBP4Q8N3X1 1017 aaPredicted RBP23.65■■□□□ 1.38
RECQL4-201ENST00000301323 CRYBG1Q9Y4K1 1723 aa23.64■■□□□ 1.38
RECQL4-201ENST00000301323 CENPJQ9HC77 1338 aaPredicted RBP23.64■■□□□ 1.38
RECQL4-201ENST00000301323 RGS12O14924 1447 aa23.63■■□□□ 1.37
RECQL4-201ENST00000301323 RXRBP28702 533 aa23.63■■□□□ 1.37
RECQL4-201ENST00000301323 BCL9LQ86UU0 1499 aa23.62■■□□□ 1.37
RECQL4-201ENST00000301323 ATRNO75882 1429 aa23.62■■□□□ 1.37
RECQL4-201ENST00000301323 NUDT16Q96DE0 195 aaKnown RBP23.62■■□□□ 1.37
RECQL4-201ENST00000301323 CDK19Q9BWU1 502 aa23.62■■□□□ 1.37
RECQL4-201ENST00000301323 ROCK2O75116 1388 aaKnown RBP23.62■■□□□ 1.37
RECQL4-201ENST00000301323 GPRASP1Q5JY77 1395 aa23.62■■□□□ 1.37
RECQL4-201ENST00000301323 SLIT2O94813 1529 aa23.61■■□□□ 1.37
RECQL4-201ENST00000301323 USP21Q9UK80 565 aa23.61■■□□□ 1.37
RECQL4-201ENST00000301323 PLCH1Q4KWH8 1693 aa23.6■■□□□ 1.37
RECQL4-201ENST00000301323 QTRT2Q9H974 415 aaKnown RBP23.6■■□□□ 1.37
RECQL4-201ENST00000301323 NBPF8Q3BBV2 869 aa23.59■■□□□ 1.37
RECQL4-201ENST00000301323 POLR3AO14802 1390 aaPredicted RBP23.59■■□□□ 1.37
RECQL4-201ENST00000301323 RALGAPBQ86X10 1494 aa23.58■■□□□ 1.37
RECQL4-201ENST00000301323 RBM6P78332 1123 aaKnown RBP23.58■■□□□ 1.37
RECQL4-201ENST00000301323 TONSLQ96HA7 1378 aa23.57■■□□□ 1.36
RECQL4-201ENST00000301323 NGDNQ8NEJ9 315 aaKnown RBP23.57■■□□□ 1.36
RECQL4-201ENST00000301323 CABLES1Q8TDN4 633 aa23.57■■□□□ 1.36
RECQL4-201ENST00000301323 NWD2Q9ULI1 1742 aa23.56■■□□□ 1.36
RECQL4-201ENST00000301323 TRPC5Q9UL62 973 aaPredicted RBP23.56■■□□□ 1.36
RECQL4-201ENST00000301323 LMOD2Q6P5Q4 547 aa23.55■■□□□ 1.36
RECQL4-201ENST00000301323 CCDC61Q9Y6R9 512 aa23.55■■□□□ 1.36
RECQL4-201ENST00000301323 UPF1Q92900 1129 aaKnown RBP eCLIP23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms