RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 PHF23Q9BUL5 403 aaPredicted RBP24.64■■□□□ 1.54
TRA2A-201ENST00000297071 MROH2AA6NES4 1674 aa24.64■■□□□ 1.53
TRA2A-201ENST00000297071 FRAT2O75474 233 aaPredicted RBP24.63■■□□□ 1.53
TRA2A-201ENST00000297071 BRPF3Q9ULD4 1205 aa24.63■■□□□ 1.53
TRA2A-201ENST00000297071 WWC1Q8IX03 1113 aa24.62■■□□□ 1.53
TRA2A-201ENST00000297071 FANCAO15360 1455 aa24.62■■□□□ 1.53
TRA2A-201ENST00000297071 CCDC27Q2M243 656 aa24.61■■□□□ 1.53
TRA2A-201ENST00000297071 WDR63Q8IWG1 891 aa24.61■■□□□ 1.53
TRA2A-201ENST00000297071 ADGRL1O94910 1474 aa24.61■■□□□ 1.53
TRA2A-201ENST00000297071 QRICH2Q9H0J4 1663 aa24.61■■□□□ 1.53
TRA2A-201ENST00000297071 PPLO60437 1756 aa24.6■■□□□ 1.53
TRA2A-201ENST00000297071 FAM43AQ8N2R8 423 aa24.6■■□□□ 1.53
TRA2A-201ENST00000297071 CARD14Q9BXL6 1004 aa24.6■■□□□ 1.53
TRA2A-201ENST00000297071 ADGRB3O60242 1522 aa24.59■■□□□ 1.53
TRA2A-201ENST00000297071 RUNDC1Q96C34 613 aa24.58■■□□□ 1.53
TRA2A-201ENST00000297071 ADGRB2O60241 1585 aa24.57■■□□□ 1.52
TRA2A-201ENST00000297071 PUS7Q96PZ0 661 aaKnown RBP24.56■■□□□ 1.52
TRA2A-201ENST00000297071 RTN4Q9NQC3 1192 aaKnown RBP24.56■■□□□ 1.52
TRA2A-201ENST00000297071 PPRC1Q5VV67 1664 aaKnown RBP24.55■■□□□ 1.52
TRA2A-201ENST00000297071 RARSP54136 660 aaKnown RBP24.54■■□□□ 1.52
TRA2A-201ENST00000297071 DMRT2Q9Y5R5 561 aa24.54■■□□□ 1.52
TRA2A-201ENST00000297071 ZNF518AQ6AHZ1 1483 aa24.53■■□□□ 1.52
TRA2A-201ENST00000297071 UPF2Q9HAU5 1272 aaKnown RBP24.53■■□□□ 1.52
TRA2A-201ENST00000297071 CT47B1P0C2W7 299 aaPredicted RBP24.52■■□□□ 1.52
TRA2A-201ENST00000297071 ANTXR1Q9H6X2 564 aa24.52■■□□□ 1.52
TRA2A-201ENST00000297071 CANXP27824 592 aaKnown RBP24.51■■□□□ 1.51
TRA2A-201ENST00000297071 L1TD1Q5T7N2 865 aaKnown RBP24.51■■□□□ 1.51
TRA2A-201ENST00000297071 TBC1D32Q96NH3 1257 aa24.51■■□□□ 1.51
TRA2A-201ENST00000297071 NSD2O96028 1365 aa24.51■■□□□ 1.51
TRA2A-201ENST00000297071 CFAP70Q5T0N1 1121 aa24.51■■□□□ 1.51
TRA2A-201ENST00000297071 COG6Q9Y2V7 657 aa24.5■■□□□ 1.51
TRA2A-201ENST00000297071 NSD3Q9BZ95 1437 aa24.5■■□□□ 1.51
TRA2A-201ENST00000297071 ADGRB1O14514 1584 aa24.49■■□□□ 1.51
TRA2A-201ENST00000297071 PRKCSHP14314 528 aaPredicted RBP24.49■■□□□ 1.51
TRA2A-201ENST00000297071 PANK1Q8TE04 598 aa24.49■■□□□ 1.51
TRA2A-201ENST00000297071 RWDD1Q9H446 243 aaPredicted RBP24.49■■□□□ 1.51
TRA2A-201ENST00000297071 ADGRF5Q8IZF2 1346 aa24.48■■□□□ 1.51
TRA2A-201ENST00000297071 UGGT1Q9NYU2 1555 aa24.47■■□□□ 1.51
TRA2A-201ENST00000297071 KIDINS220Q9ULH0 1771 aa24.47■■□□□ 1.51
TRA2A-201ENST00000297071 SEC24BO95487 1268 aa24.47■■□□□ 1.51
TRA2A-201ENST00000297071 AFAP1Q8N556 730 aa24.46■■□□□ 1.51
TRA2A-201ENST00000297071 MORC1Q86VD1 984 aa24.45■■□□□ 1.5
TRA2A-201ENST00000297071 RSPH6AQ9H0K4 717 aa24.45■■□□□ 1.5
TRA2A-201ENST00000297071 MYH16Q9H6N6 1097 aa24.44■■□□□ 1.5
TRA2A-201ENST00000297071 KDM4FA0A1W2PPD8 638 aa24.43■■□□□ 1.5
TRA2A-201ENST00000297071 TCP11L2Q8N4U5 519 aa24.43■■□□□ 1.5
TRA2A-201ENST00000297071 CFAP53Q96M91 514 aa24.43■■□□□ 1.5
TRA2A-201ENST00000297071 ANKRD26Q9UPS8 1709 aa24.43■■□□□ 1.5
TRA2A-201ENST00000297071 PDZRN3Q9UPQ7 1066 aa24.42■■□□□ 1.5
TRA2A-201ENST00000297071 PCDHB15Q9Y5E8 787 aa24.42■■□□□ 1.5
TRA2A-201ENST00000297071 RPGRIP1LQ68CZ1 1315 aa24.41■■□□□ 1.5
TRA2A-201ENST00000297071 ARHGEF28Q8N1W1 1705 aaKnown RBP24.41■■□□□ 1.5
TRA2A-201ENST00000297071 C14orf93Q9H972 538 aaKnown RBP24.4■■□□□ 1.5
TRA2A-201ENST00000297071 NOS1P29475 1434 aa24.39■■□□□ 1.5
TRA2A-201ENST00000297071 KIF3BO15066 747 aa24.39■■□□□ 1.49
TRA2A-201ENST00000297071 MVPQ14764 893 aaKnown RBP24.38■■□□□ 1.49
TRA2A-201ENST00000297071 TBC1D2Q9BYX2 928 aa24.37■■□□□ 1.49
TRA2A-201ENST00000297071 RLBP1P12271 317 aa24.36■■□□□ 1.49
TRA2A-201ENST00000297071 POGKQ9P215 609 aa24.36■■□□□ 1.49
TRA2A-201ENST00000297071 HDAC1Q13547 482 aaPredicted RBP24.35■■□□□ 1.49
TRA2A-201ENST00000297071 GLI2P10070 1586 aa24.35■■□□□ 1.49
TRA2A-201ENST00000297071 ANKRD36BQ8N2N9 1353 aa24.35■■□□□ 1.49
TRA2A-201ENST00000297071 PIK3C2BO00750 1634 aa24.35■■□□□ 1.49
TRA2A-201ENST00000297071 ZKSCAN2Q63HK3 967 aa24.35■■□□□ 1.49
TRA2A-201ENST00000297071 CFAP74Q9C0B2 1584 aa24.34■■□□□ 1.49
TRA2A-201ENST00000297071 HECW2Q9P2P5 1572 aa24.34■■□□□ 1.49
TRA2A-201ENST00000297071 ABCC11Q96J66 1382 aa24.33■■□□□ 1.48
TRA2A-201ENST00000297071 IL16Q14005 1332 aa24.32■■□□□ 1.48
TRA2A-201ENST00000297071 FSD2A1L4K1 749 aa24.32■■□□□ 1.48
TRA2A-201ENST00000297071 MED14O60244 1454 aa24.31■■□□□ 1.48
TRA2A-201ENST00000297071 CHMP5Q9NZZ3 219 aa24.31■■□□□ 1.48
TRA2A-201ENST00000297071 ISY1Q9ULR0 285 aaKnown RBP24.31■■□□□ 1.48
TRA2A-201ENST00000297071 TULP4Q9NRJ4 1543 aa24.3■■□□□ 1.48
TRA2A-201ENST00000297071 CAMSAP1Q5T5Y3 1602 aa24.3■■□□□ 1.48
TRA2A-201ENST00000297071 MTHFSP49914 203 aa24.3■■□□□ 1.48
TRA2A-201ENST00000297071 DZIP1LQ8IYY4 767 aaKnown RBP24.3■■□□□ 1.48
TRA2A-201ENST00000297071 SLKQ9H2G2 1235 aaPredicted RBP24.29■■□□□ 1.48
TRA2A-201ENST00000297071 NCOA3Q9Y6Q9 1424 aa24.28■■□□□ 1.48
TRA2A-201ENST00000297071 MCM4P33991 863 aa24.28■■□□□ 1.48
TRA2A-201ENST00000297071 SLC12A5Q9H2X9 1139 aa24.28■■□□□ 1.48
TRA2A-201ENST00000297071 COL3A1P02461 1466 aaPredicted RBP24.28■■□□□ 1.48
TRA2A-201ENST00000297071 CLTCQ00610 1675 aaKnown RBP24.27■■□□□ 1.48
TRA2A-201ENST00000297071 DDX19BQ9UMR2 479 aa24.27■■□□□ 1.48
TRA2A-201ENST00000297071 SMC5Q8IY18 1101 aa24.26■■□□□ 1.47
TRA2A-201ENST00000297071 C22orf23Q9BZE7 217 aa24.26■■□□□ 1.47
TRA2A-201ENST00000297071 EVC2Q86UK5 1308 aa24.26■■□□□ 1.47
TRA2A-201ENST00000297071 RRP7AQ9Y3A4 280 aaKnown RBP24.25■■□□□ 1.47
TRA2A-201ENST00000297071 NPATQ14207 1427 aa24.25■■□□□ 1.47
TRA2A-201ENST00000297071 REREQ9P2R6 1566 aa24.25■■□□□ 1.47
TRA2A-201ENST00000297071 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.24■■□□□ 1.47
TRA2A-201ENST00000297071 CDC42BPGQ6DT37 1551 aa24.24■■□□□ 1.47
TRA2A-201ENST00000297071 TNNQ9UQP3 1299 aa24.24■■□□□ 1.47
TRA2A-201ENST00000297071 NEUROD2Q15784 382 aa24.23■■□□□ 1.47
TRA2A-201ENST00000297071 FTSJ3Q8IY81 847 aaKnown RBP24.23■■□□□ 1.47
TRA2A-201ENST00000297071 MLH3Q9UHC1 1453 aa24.23■■□□□ 1.47
TRA2A-201ENST00000297071 NEXMIFQ5QGS0 1516 aa24.22■■□□□ 1.47
TRA2A-201ENST00000297071 GOLGA6L3A6NEY3 463 aa24.22■■□□□ 1.47
TRA2A-201ENST00000297071 FRMPD1Q5SYB0 1578 aa24.22■■□□□ 1.47
TRA2A-201ENST00000297071 ZFYVE9O95405 1425 aa24.22■■□□□ 1.47
TRA2A-201ENST00000297071 FBXO41Q8TF61 875 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms