RNA–Protein interactions for RNA: ENST00000296859.10

RAPGEF6-201, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF6, Length 5,618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-201ENST00000296859 LMOD3Q0VAK6 560 aa5.22□□□□□ -1.57
RAPGEF6-201ENST00000296859 ZNF428Q96B54 188 aa5.22□□□□□ -1.57
RAPGEF6-201ENST00000296859 COMMD10Q9Y6G5 202 aa5.22□□□□□ -1.57
RAPGEF6-201ENST00000296859 CDK5RAP3Q96JB5 506 aa5.22□□□□□ -1.57
RAPGEF6-201ENST00000296859 LRRIQ1Q96JM4 1722 aa5.21□□□□□ -1.57
RAPGEF6-201ENST00000296859 ANKRD62A6NC57 917 aa5.21□□□□□ -1.57
RAPGEF6-201ENST00000296859 HMGB2P26583 209 aaKnown RBP5.21□□□□□ -1.57
RAPGEF6-201ENST00000296859 GRIPAP1Q4V328 841 aa5.21□□□□□ -1.57
RAPGEF6-201ENST00000296859 KDM5BQ9UGL1 1544 aa5.21□□□□□ -1.58
RAPGEF6-201ENST00000296859 HMGN5P82970 282 aaKnown RBP5.21□□□□□ -1.58
RAPGEF6-201ENST00000296859 ANKRD20A12PQ8NF67 263 aa5.21□□□□□ -1.58
RAPGEF6-201ENST00000296859 ZPR1O75312 459 aa5.21□□□□□ -1.58
RAPGEF6-201ENST00000296859 CNNM1Q9NRU3 951 aa5.21□□□□□ -1.58
RAPGEF6-201ENST00000296859 NF2P35240 595 aa5.2□□□□□ -1.58
RAPGEF6-201ENST00000296859 ZNF76P36508 570 aa5.2□□□□□ -1.58
RAPGEF6-201ENST00000296859 PHF14O94880 888 aa5.2□□□□□ -1.58
RAPGEF6-201ENST00000296859 IFIT2P09913 472 aaKnown RBP5.2□□□□□ -1.58
RAPGEF6-201ENST00000296859 GPRASP1Q5JY77 1395 aa5.2□□□□□ -1.58
RAPGEF6-201ENST00000296859 ZBTB24O43167 697 aaPredicted RBP5.2□□□□□ -1.58
RAPGEF6-201ENST00000296859 SLC3A2P08195 630 aaKnown RBP5.2□□□□□ -1.58
RAPGEF6-201ENST00000296859 NEFHP12036 1026 aa5.2□□□□□ -1.58
RAPGEF6-201ENST00000296859 G3BP1Q13283 466 aaKnown RBP eCLIP5.2□□□□□ -1.58
RAPGEF6-201ENST00000296859 CRACR2BQ8N4Y2 399 aaPredicted RBP5.2□□□□□ -1.58
RAPGEF6-201ENST00000296859 ZNF526Q8TF50 670 aaPredicted RBP5.2□□□□□ -1.58
RAPGEF6-201ENST00000296859 HOMER2Q9NSB8 354 aa5.2□□□□□ -1.58
RAPGEF6-201ENST00000296859 DIAPH3Q9NSV4 1193 aa5.2□□□□□ -1.58
RAPGEF6-201ENST00000296859 GNL3LQ9NVN8 582 aaKnown RBP5.2□□□□□ -1.58
RAPGEF6-201ENST00000296859 MKI67P46013 3256 aaKnown RBP5.2□□□□□ -1.58
RAPGEF6-201ENST00000296859 DESP17661 470 aa5.2□□□□□ -1.58
RAPGEF6-201ENST00000296859 ATP2B1P20020 1258 aa5.2□□□□□ -1.58
RAPGEF6-201ENST00000296859 TAF12Q16514 161 aa5.2□□□□□ -1.58
RAPGEF6-201ENST00000296859 FOXD4L6Q3SYB3 417 aaPredicted RBP5.2□□□□□ -1.58
RAPGEF6-201ENST00000296859 FOXD4L3Q6VB84 417 aaPredicted RBP5.2□□□□□ -1.58
RAPGEF6-201ENST00000296859 RGS22Q8NE09 1264 aa5.2□□□□□ -1.58
RAPGEF6-201ENST00000296859 STK25O00506 426 aa5.2□□□□□ -1.58
RAPGEF6-201ENST00000296859 MSNP26038 577 aaKnown RBP5.2□□□□□ -1.58
RAPGEF6-201ENST00000296859 NLRP6P59044 892 aa5.2□□□□□ -1.58
RAPGEF6-201ENST00000296859 CCDC70Q6NSX1 233 aa5.2□□□□□ -1.58
RAPGEF6-201ENST00000296859 CLUAP1Q96AJ1 413 aa5.2□□□□□ -1.58
RAPGEF6-201ENST00000296859 CARMIL2Q6F5E8 1435 aa5.19□□□□□ -1.58
RAPGEF6-201ENST00000296859 DNAH12Q6ZR08 3092 aa5.19□□□□□ -1.58
RAPGEF6-201ENST00000296859 TRMT1LQ7Z2T5 733 aaKnown RBP5.19□□□□□ -1.58
RAPGEF6-201ENST00000296859 RALYLQ86SE5 291 aaKnown RBP5.19□□□□□ -1.58
RAPGEF6-201ENST00000296859 BRMS1Q9HCU9 246 aa5.19□□□□□ -1.58
RAPGEF6-201ENST00000296859 XPCQ01831 940 aaPredicted RBP5.19□□□□□ -1.58
RAPGEF6-201ENST00000296859 SAFBQ15424 915 aaKnown RBP eCLIP5.19□□□□□ -1.58
RAPGEF6-201ENST00000296859 PPP4R3AQ6IN85 833 aa5.19□□□□□ -1.58
RAPGEF6-201ENST00000296859 TBC1D2BQ9UPU7 963 aa5.19□□□□□ -1.58
RAPGEF6-201ENST00000296859 PABPN1LA6NDY0 278 aaKnown RBP5.19□□□□□ -1.58
RAPGEF6-201ENST00000296859 LIG1P18858 919 aa5.19□□□□□ -1.58
RAPGEF6-201ENST00000296859 AIDAQ96BJ3 306 aa5.19□□□□□ -1.58
RAPGEF6-201ENST00000296859 FEZ1Q99689 392 aa5.19□□□□□ -1.58
RAPGEF6-201ENST00000296859 CAPN15O75808 1086 aa5.19□□□□□ -1.58
RAPGEF6-201ENST00000296859 LMOD1P29536 600 aaPredicted RBP5.19□□□□□ -1.58
RAPGEF6-201ENST00000296859 ABTB2Q8N961 1025 aa5.19□□□□□ -1.58
RAPGEF6-201ENST00000296859 REV3LO60673 3130 aa5.18□□□□□ -1.58
RAPGEF6-201ENST00000296859 LPXNO60711 386 aa5.18□□□□□ -1.58
RAPGEF6-201ENST00000296859 RBM26Q5T8P6 1007 aaKnown RBP5.18□□□□□ -1.58
RAPGEF6-201ENST00000296859 DNAI2Q9GZS0 605 aa5.18□□□□□ -1.58
RAPGEF6-201ENST00000296859 USP5P45974 858 aa5.18□□□□□ -1.58
RAPGEF6-201ENST00000296859 MRPS9P82933 396 aaKnown RBP5.18□□□□□ -1.58
RAPGEF6-201ENST00000296859 TXNDC2Q86VQ3 553 aa5.18□□□□□ -1.58
RAPGEF6-201ENST00000296859 MPHOSPH8Q99549 860 aa5.18□□□□□ -1.58
RAPGEF6-201ENST00000296859 DCAF1Q9Y4B6 1507 aa5.18□□□□□ -1.58
RAPGEF6-201ENST00000296859 TATP17735 454 aaPredicted RBP5.18□□□□□ -1.58
RAPGEF6-201ENST00000296859 SKIDA1Q1XH10 827 aa5.17□□□□□ -1.58
RAPGEF6-201ENST00000296859 NACADO15069 1562 aa5.17□□□□□ -1.58
RAPGEF6-201ENST00000296859 TOM1O60784 492 aa5.17□□□□□ -1.58
RAPGEF6-201ENST00000296859 CABP4P57796 275 aa5.17□□□□□ -1.58
RAPGEF6-201ENST00000296859 SKIV2LQ15477 1246 aaKnown RBP5.17□□□□□ -1.58
RAPGEF6-201ENST00000296859 ZNF354CQ86Y25 554 aa5.17□□□□□ -1.58
RAPGEF6-201ENST00000296859 ERC1Q8IUD2 1116 aa5.17□□□□□ -1.58
RAPGEF6-201ENST00000296859 NOD1Q9Y239 953 aa5.17□□□□□ -1.58
RAPGEF6-201ENST00000296859 CEP350Q5VT06 3117 aa5.17□□□□□ -1.58
RAPGEF6-201ENST00000296859 SSBP05455 408 aaKnown RBP eCLIP5.17□□□□□ -1.58
RAPGEF6-201ENST00000296859 PPP4R3CPQ6ZMV5 832 aa5.17□□□□□ -1.58
RAPGEF6-201ENST00000296859 RB1CC1Q8TDY2 1594 aa5.17□□□□□ -1.58
RAPGEF6-201ENST00000296859 SSR1P43307 286 aaKnown RBP5.17□□□□□ -1.58
RAPGEF6-201ENST00000296859 FKBP5Q13451 457 aaPredicted RBP5.17□□□□□ -1.58
RAPGEF6-201ENST00000296859 PKD2Q13563 968 aa5.17□□□□□ -1.58
RAPGEF6-201ENST00000296859 RPGRQ92834 1020 aaKnown RBP5.17□□□□□ -1.58
RAPGEF6-201ENST00000296859 BECN2A8MW95 431 aa5.17□□□□□ -1.58
RAPGEF6-201ENST00000296859 CSPP1Q1MSJ5 1256 aa5.17□□□□□ -1.58
RAPGEF6-201ENST00000296859 C8orf37Q96NL8 207 aa5.17□□□□□ -1.58
RAPGEF6-201ENST00000296859 ANKIB1Q9P2G1 1089 aa5.17□□□□□ -1.58
RAPGEF6-201ENST00000296859 DMRT2Q9Y5R5 561 aa5.17□□□□□ -1.58
RAPGEF6-201ENST00000296859 C6orf229H3BNL8 230 aa5.16□□□□□ -1.58
RAPGEF6-201ENST00000296859 XBP1P17861 261 aa5.16□□□□□ -1.58
RAPGEF6-201ENST00000296859 CCDC173Q0VFZ6 552 aa5.16□□□□□ -1.58
RAPGEF6-201ENST00000296859 RBM19Q9Y4C8 960 aaKnown RBP5.16□□□□□ -1.58
RAPGEF6-201ENST00000296859 CCDC146Q8IYE0 955 aa5.16□□□□□ -1.58
RAPGEF6-201ENST00000296859 PMFBP1Q8TBY8 1022 aa5.16□□□□□ -1.58
RAPGEF6-201ENST00000296859 SYAP1Q96A49 352 aaPredicted RBP5.16□□□□□ -1.58
RAPGEF6-201ENST00000296859 ANO2Q9NQ90 1003 aa5.16□□□□□ -1.58
RAPGEF6-201ENST00000296859 MFAP1P55081 439 aaKnown RBP5.16□□□□□ -1.58
RAPGEF6-201ENST00000296859 ZBTB33Q86T24 672 aa5.16□□□□□ -1.58
RAPGEF6-201ENST00000296859 MYO1BO43795 1136 aa5.16□□□□□ -1.58
RAPGEF6-201ENST00000296859 MYCP01106 439 aaPredicted RBP5.16□□□□□ -1.58
RAPGEF6-201ENST00000296859 EAPPQ56P03 285 aaPredicted RBP5.16□□□□□ -1.58
RAPGEF6-201ENST00000296859 SOGA3Q5TF21 947 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms