RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 NPHP3Q7Z494 1330 aa15.87■□□□□ 0.13
RFC4-201ENST00000296273 COL22A1Q8NFW1 1626 aaPredicted RBP15.86■□□□□ 0.13
RFC4-201ENST00000296273 SLC4A1APQ9BWU0 796 aaKnown RBP15.86■□□□□ 0.13
RFC4-201ENST00000296273 CDC42BPGQ6DT37 1551 aa15.85■□□□□ 0.13
RFC4-201ENST00000296273 PPLO60437 1756 aa15.85■□□□□ 0.13
RFC4-201ENST00000296273 ATRNO75882 1429 aa15.83■□□□□ 0.12
RFC4-201ENST00000296273 LRPPRCP42704 1394 aaKnown RBP15.83■□□□□ 0.12
RFC4-201ENST00000296273 ESCO1Q5FWF5 840 aa15.83■□□□□ 0.12
RFC4-201ENST00000296273 MYOM2P54296 1465 aa15.82■□□□□ 0.12
RFC4-201ENST00000296273 CCDC125Q86Z20 511 aa15.8■□□□□ 0.12
RFC4-201ENST00000296273 PXDNQ92626 1479 aa15.8■□□□□ 0.12
RFC4-201ENST00000296273 TECPR2O15040 1411 aa15.8■□□□□ 0.12
RFC4-201ENST00000296273 BCL9LQ86UU0 1499 aa15.78■□□□□ 0.12
RFC4-201ENST00000296273 FOXO3O43524 673 aa15.78■□□□□ 0.12
RFC4-201ENST00000296273 TRIM26Q12899 539 aaPredicted RBP15.78■□□□□ 0.12
RFC4-201ENST00000296273 CCDC144AA2RUR9 1427 aa15.78■□□□□ 0.12
RFC4-201ENST00000296273 ANKRD30BQ9BXX2 1392 aa15.78■□□□□ 0.12
RFC4-201ENST00000296273 MARF1Q9Y4F3 1742 aaKnown RBP15.77■□□□□ 0.12
RFC4-201ENST00000296273 ABCC11Q96J66 1382 aa15.77■□□□□ 0.11
RFC4-201ENST00000296273 ADGRF5Q8IZF2 1346 aa15.77■□□□□ 0.11
RFC4-201ENST00000296273 GJD4Q96KN9 370 aaPredicted RBP15.76■□□□□ 0.11
RFC4-201ENST00000296273 ZRANB1Q9UGI0 708 aa15.76■□□□□ 0.11
RFC4-201ENST00000296273 KNDC1Q76NI1 1749 aa15.74■□□□□ 0.11
RFC4-201ENST00000296273 SPATA31E1Q6ZUB1 1445 aa15.74■□□□□ 0.11
RFC4-201ENST00000296273 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.74■□□□□ 0.11
RFC4-201ENST00000296273 XPCQ01831 940 aaPredicted RBP15.74■□□□□ 0.11
RFC4-201ENST00000296273 RGL3Q3MIN7 710 aa15.74■□□□□ 0.11
RFC4-201ENST00000296273 WAPLQ7Z5K2 1190 aa15.74■□□□□ 0.11
RFC4-201ENST00000296273 STK26Q9P289 416 aa15.74■□□□□ 0.11
RFC4-201ENST00000296273 KIF1AQ12756 1690 aa15.73■□□□□ 0.11
RFC4-201ENST00000296273 UNC5CLQ8IV45 518 aa15.73■□□□□ 0.11
RFC4-201ENST00000296273 IFT172Q9UG01 1749 aa15.72■□□□□ 0.11
RFC4-201ENST00000296273 PIK3C2GO75747 1445 aa15.72■□□□□ 0.11
RFC4-201ENST00000296273 SPATA31A3Q5VYP0 1347 aa15.72■□□□□ 0.11
RFC4-201ENST00000296273 NUTM2FA1L443 756 aa15.72■□□□□ 0.11
RFC4-201ENST00000296273 SIRT1Q96EB6 747 aa15.72■□□□□ 0.11
RFC4-201ENST00000296273 SLIT2O94813 1529 aa15.71■□□□□ 0.11
RFC4-201ENST00000296273 FMN2Q9NZ56 1722 aa15.71■□□□□ 0.11
RFC4-201ENST00000296273 YTHDC2Q9H6S0 1430 aaKnown RBP15.71■□□□□ 0.1
RFC4-201ENST00000296273 PLEKHH1Q9ULM0 1364 aa15.7■□□□□ 0.1
RFC4-201ENST00000296273 TMEM132EQ6IEE7 984 aa15.7■□□□□ 0.1
RFC4-201ENST00000296273 ACIN1Q9UKV3 1341 aaKnown RBP15.7■□□□□ 0.1
RFC4-201ENST00000296273 PSME1Q06323 249 aa15.69■□□□□ 0.1
RFC4-201ENST00000296273 KRT28Q7Z3Y7 464 aa15.69■□□□□ 0.1
RFC4-201ENST00000296273 MPHOSPH9Q99550 1183 aa15.69■□□□□ 0.1
RFC4-201ENST00000296273 RALGAPBQ86X10 1494 aa15.69■□□□□ 0.1
RFC4-201ENST00000296273 USP32Q8NFA0 1604 aa15.69■□□□□ 0.1
RFC4-201ENST00000296273 BLMP54132 1417 aaPredicted RBP15.68■□□□□ 0.1
RFC4-201ENST00000296273 PCGF6Q9BYE7 350 aa15.68■□□□□ 0.1
RFC4-201ENST00000296273 GLI3P10071 1580 aa15.67■□□□□ 0.1
RFC4-201ENST00000296273 TNS3Q68CZ2 1445 aa15.67■□□□□ 0.1
RFC4-201ENST00000296273 HAP1P54257 671 aaPredicted RBP15.67■□□□□ 0.1
RFC4-201ENST00000296273 EP400Q96L91 3159 aa15.67■□□□□ 0.1
RFC4-201ENST00000296273 C14orf93Q9H972 538 aaKnown RBP15.66■□□□□ 0.1
RFC4-201ENST00000296273 PHF8Q9UPP1 1060 aa15.66■□□□□ 0.1
RFC4-201ENST00000296273 DHX57Q6P158 1386 aaKnown RBP15.66■□□□□ 0.1
RFC4-201ENST00000296273 SBNO1A3KN83 1393 aa15.65■□□□□ 0.1
RFC4-201ENST00000296273 SF3B2Q13435 895 aaKnown RBP15.64■□□□□ 0.09
RFC4-201ENST00000296273 VPS72Q15906 364 aa15.64■□□□□ 0.09
RFC4-201ENST00000296273 ARHGEF10O15013 1369 aa15.64■□□□□ 0.09
RFC4-201ENST00000296273 SRCAPQ6ZRS2 3230 aa15.64■□□□□ 0.09
RFC4-201ENST00000296273 NRXN1Q9ULB1 1477 aa15.63■□□□□ 0.09
RFC4-201ENST00000296273 NWD2Q9ULI1 1742 aa15.63■□□□□ 0.09
RFC4-201ENST00000296273 SEPT12Q8IYM1 358 aa15.62■□□□□ 0.09
RFC4-201ENST00000296273 ONECUT3O60422 494 aaPredicted RBP15.62■□□□□ 0.09
RFC4-201ENST00000296273 ANKARQ7Z5J8 1434 aa15.61■□□□□ 0.09
RFC4-201ENST00000296273 DLC1Q96QB1 1528 aa15.6■□□□□ 0.09
RFC4-201ENST00000296273 CFAP70Q5T0N1 1121 aa15.6■□□□□ 0.09
RFC4-201ENST00000296273 CABLES1Q8TDN4 633 aa15.6■□□□□ 0.09
RFC4-201ENST00000296273 CCDC9Q9Y3X0 531 aaKnown RBP15.6■□□□□ 0.09
RFC4-201ENST00000296273 RGPD8O14715 1765 aaPredicted RBP15.59■□□□□ 0.09
RFC4-201ENST00000296273 PLCH1Q4KWH8 1693 aa15.59■□□□□ 0.09
RFC4-201ENST00000296273 LMOD2Q6P5Q4 547 aa15.59■□□□□ 0.09
RFC4-201ENST00000296273 KRT27Q7Z3Y8 459 aa15.59■□□□□ 0.09
RFC4-201ENST00000296273 PRAM1Q96QH2 718 aa15.59■□□□□ 0.09
RFC4-201ENST00000296273 BRWD3Q6RI45 1802 aa15.58■□□□□ 0.08
RFC4-201ENST00000296273 DEFB132Q7Z7B7 95 aa15.58■□□□□ 0.08
RFC4-201ENST00000296273 POGKQ9P215 609 aa15.58■□□□□ 0.08
RFC4-201ENST00000296273 ABCA3Q99758 1704 aa15.57■□□□□ 0.08
RFC4-201ENST00000296273 ADGRB2O60241 1585 aa15.57■□□□□ 0.08
RFC4-201ENST00000296273 EIF3AQ14152 1382 aaKnown RBP15.56■□□□□ 0.08
RFC4-201ENST00000296273 SAFB2Q14151 953 aaKnown RBP eCLIP15.56■□□□□ 0.08
RFC4-201ENST00000296273 FAM83GA6ND36 823 aa15.55■□□□□ 0.08
RFC4-201ENST00000296273 PMFBP1Q8TBY8 1022 aa15.55■□□□□ 0.08
RFC4-201ENST00000296273 GPRASP1Q5JY77 1395 aa15.55■□□□□ 0.08
RFC4-201ENST00000296273 PLEKHG5O94827 1062 aa15.54■□□□□ 0.08
RFC4-201ENST00000296273 BAG6P46379 1132 aa15.54■□□□□ 0.08
RFC4-201ENST00000296273 A0A0G2JS52 829 aa15.53■□□□□ 0.08
RFC4-201ENST00000296273 MYT1Q01538 1121 aa15.53■□□□□ 0.08
RFC4-201ENST00000296273 BTG4Q9NY30 223 aa15.52■□□□□ 0.08
RFC4-201ENST00000296273 LRP5O75197 1615 aa15.52■□□□□ 0.07
RFC4-201ENST00000296273 NRAPQ86VF7 1730 aa15.52■□□□□ 0.07
RFC4-201ENST00000296273 TRPM3Q9HCF6 1732 aaPredicted RBP15.52■□□□□ 0.07
RFC4-201ENST00000296273 ADGRB1O14514 1584 aa15.52■□□□□ 0.07
RFC4-201ENST00000296273 HRCP23327 699 aa15.51■□□□□ 0.07
RFC4-201ENST00000296273 STAC3Q96MF2 364 aa15.51■□□□□ 0.07
RFC4-201ENST00000296273 COL14A1Q05707 1796 aaKnown RBP15.51■□□□□ 0.07
RFC4-201ENST00000296273 ALS2Q96Q42 1657 aa15.51■□□□□ 0.07
RFC4-201ENST00000296273 TULP4Q9NRJ4 1543 aa15.51■□□□□ 0.07
RFC4-201ENST00000296273 FAM98CQ17RN3 349 aaKnown RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms