RNA–Protein interactions for RNA: ENST00000296122.10

PPP1CB-201, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CB, Length 3,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-201ENST00000296122 TMEM131LA2VDJ0 1609 aa17.47■□□□□ 0.39
PPP1CB-201ENST00000296122 LRPPRCP42704 1394 aaKnown RBP17.46■□□□□ 0.39
PPP1CB-201ENST00000296122 NLRP1Q9C000 1473 aa17.46■□□□□ 0.39
PPP1CB-201ENST00000296122 NINLQ9Y2I6 1382 aa17.45■□□□□ 0.38
PPP1CB-201ENST00000296122 IFT172Q9UG01 1749 aa17.44■□□□□ 0.38
PPP1CB-201ENST00000296122 ADGRB1O14514 1584 aa17.43■□□□□ 0.38
PPP1CB-201ENST00000296122 NPC1L1Q9UHC9 1359 aa17.43■□□□□ 0.38
PPP1CB-201ENST00000296122 NEFMP07197 916 aa17.43■□□□□ 0.38
PPP1CB-201ENST00000296122 CABP1Q9NZU7 370 aa17.43■□□□□ 0.38
PPP1CB-201ENST00000296122 NUDCQ9Y266 331 aa17.43■□□□□ 0.38
PPP1CB-201ENST00000296122 ANKLE2Q86XL3 938 aa17.42■□□□□ 0.38
PPP1CB-201ENST00000296122 CARD14Q9BXL6 1004 aa17.42■□□□□ 0.38
PPP1CB-201ENST00000296122 ABCC11Q96J66 1382 aa17.42■□□□□ 0.38
PPP1CB-201ENST00000296122 C14orf37Q86TY3 774 aa17.41■□□□□ 0.38
PPP1CB-201ENST00000296122 ANKRD36BQ8N2N9 1353 aa17.41■□□□□ 0.38
PPP1CB-201ENST00000296122 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.41■□□□□ 0.383e-6■■□□□ 11.5
PPP1CB-201ENST00000296122 ALKQ9UM73 1620 aa17.41■□□□□ 0.38
PPP1CB-201ENST00000296122 NUTM2FA1L443 756 aa17.4■□□□□ 0.38
PPP1CB-201ENST00000296122 WASLO00401 505 aaPredicted RBP17.39■□□□□ 0.38
PPP1CB-201ENST00000296122 PPM1GO15355 546 aaPredicted RBP17.39■□□□□ 0.38
PPP1CB-201ENST00000296122 PDE3BQ13370 1112 aa17.39■□□□□ 0.38
PPP1CB-201ENST00000296122 GGNBP2Q9H3C7 697 aa17.39■□□□□ 0.38
PPP1CB-201ENST00000296122 LTKP29376 864 aa17.39■□□□□ 0.37
PPP1CB-201ENST00000296122 ADAMTS8Q9UP79 889 aa17.39■□□□□ 0.37
PPP1CB-201ENST00000296122 IRX6P78412 446 aaPredicted RBP17.38■□□□□ 0.37
PPP1CB-201ENST00000296122 AMOTL2Q9Y2J4 779 aa17.37■□□□□ 0.37
PPP1CB-201ENST00000296122 CCDC61Q9Y6R9 512 aa17.37■□□□□ 0.37
PPP1CB-201ENST00000296122 QRICH2Q9H0J4 1663 aa17.37■□□□□ 0.37
PPP1CB-201ENST00000296122 METP08581 1390 aa17.37■□□□□ 0.37
PPP1CB-201ENST00000296122 NSD2O96028 1365 aa17.36■□□□□ 0.37
PPP1CB-201ENST00000296122 U2SURPO15042 1029 aaKnown RBP17.36■□□□□ 0.37
PPP1CB-201ENST00000296122 PLEKHG1Q9ULL1 1385 aa17.36■□□□□ 0.37
PPP1CB-201ENST00000296122 NUDT16Q96DE0 195 aaKnown RBP17.36■□□□□ 0.37
PPP1CB-201ENST00000296122 TBX22Q9Y458 520 aa17.36■□□□□ 0.37
PPP1CB-201ENST00000296122 MYO5BQ9ULV0 1848 aa17.36■□□□□ 0.37
PPP1CB-201ENST00000296122 MTHFSP49914 203 aa17.35■□□□□ 0.37
PPP1CB-201ENST00000296122 CCDC146Q8IYE0 955 aa17.35■□□□□ 0.37
PPP1CB-201ENST00000296122 SIRT1Q96EB6 747 aa17.35■□□□□ 0.37
PPP1CB-201ENST00000296122 U2AF1L5P0DN76 240 aaPredicted RBP17.34■□□□□ 0.37
PPP1CB-201ENST00000296122 U2AF1Q01081 240 aaKnown RBP eCLIP17.34■□□□□ 0.373e-16■■□□□ 12.8
PPP1CB-201ENST00000296122 NGDNQ8NEJ9 315 aaKnown RBP17.33■□□□□ 0.36
PPP1CB-201ENST00000296122 A0A1W2PP64 1363 aa17.32■□□□□ 0.36
PPP1CB-201ENST00000296122 PLEKHH1Q9ULM0 1364 aa17.32■□□□□ 0.36
PPP1CB-201ENST00000296122 NEUROD2Q15784 382 aa17.32■□□□□ 0.36
PPP1CB-201ENST00000296122 ZNF692Q9BU19 519 aaPredicted RBP17.32■□□□□ 0.36
PPP1CB-201ENST00000296122 MYO3AQ8NEV4 1616 aa17.32■□□□□ 0.36
PPP1CB-201ENST00000296122 COG3Q96JB2 828 aa17.31■□□□□ 0.36
PPP1CB-201ENST00000296122 MAPK8IP3Q9UPT6 1336 aa17.31■□□□□ 0.36
PPP1CB-201ENST00000296122 PTPRMP28827 1452 aa17.31■□□□□ 0.36
PPP1CB-201ENST00000296122 PNNQ9H307 717 aaKnown RBP17.3■□□□□ 0.36
PPP1CB-201ENST00000296122 APAF1O14727 1248 aa17.29■□□□□ 0.36
PPP1CB-201ENST00000296122 FER1L4A9Z1Z3 1794 aa17.29■□□□□ 0.36
PPP1CB-201ENST00000296122 NGEFQ8N5V2 710 aa17.29■□□□□ 0.36
PPP1CB-201ENST00000296122 GOLGA2Q08379 1002 aa17.28■□□□□ 0.36
PPP1CB-201ENST00000296122 FAM135BQ49AJ0 1406 aa17.28■□□□□ 0.36
PPP1CB-201ENST00000296122 TULP4Q9NRJ4 1543 aa17.28■□□□□ 0.36
PPP1CB-201ENST00000296122 ARHGEF28Q8N1W1 1705 aaKnown RBP17.27■□□□□ 0.35
PPP1CB-201ENST00000296122 PPIP5K1Q6PFW1 1433 aa17.27■□□□□ 0.35
PPP1CB-201ENST00000296122 SMG6Q86US8 1419 aaKnown RBP17.27■□□□□ 0.35
PPP1CB-201ENST00000296122 DLC1Q96QB1 1528 aa17.26■□□□□ 0.35
PPP1CB-201ENST00000296122 RCAN3Q9UKA8 241 aa17.26■□□□□ 0.35
PPP1CB-201ENST00000296122 FYB1O15117 783 aa17.26■□□□□ 0.35
PPP1CB-201ENST00000296122 ERICH6BQ5W0A0 696 aa17.26■□□□□ 0.35
PPP1CB-201ENST00000296122 POLR3AO14802 1390 aaPredicted RBP17.25■□□□□ 0.35
PPP1CB-201ENST00000296122 DIAPH1O60610 1272 aaKnown RBP17.25■□□□□ 0.35
PPP1CB-201ENST00000296122 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.25■□□□□ 0.35
PPP1CB-201ENST00000296122 RUNDC1Q96C34 613 aa17.24■□□□□ 0.35
PPP1CB-201ENST00000296122 INSRP06213 1382 aa17.24■□□□□ 0.35
PPP1CB-201ENST00000296122 ROBO2Q9HCK4 1378 aa17.24■□□□□ 0.35
PPP1CB-201ENST00000296122 SOX12O15370 315 aa17.24■□□□□ 0.35
PPP1CB-201ENST00000296122 PMFBP1Q8TBY8 1022 aa17.23■□□□□ 0.35
PPP1CB-201ENST00000296122 ADAMTS13Q76LX8 1427 aa17.22■□□□□ 0.35
PPP1CB-201ENST00000296122 PAK3O75914 559 aaPredicted RBP17.22■□□□□ 0.35
PPP1CB-201ENST00000296122 KCNA6P17658 529 aa17.22■□□□□ 0.35
PPP1CB-201ENST00000296122 CANXP27824 592 aaKnown RBP17.22■□□□□ 0.35
PPP1CB-201ENST00000296122 PPP4R2Q9NY27 417 aa17.22■□□□□ 0.35
PPP1CB-201ENST00000296122 CDCA7LQ96GN5 454 aa17.21■□□□□ 0.34
PPP1CB-201ENST00000296122 NME9Q86XW9 330 aa17.2■□□□□ 0.34
PPP1CB-201ENST00000296122 C3P01024 1663 aa17.2■□□□□ 0.34
PPP1CB-201ENST00000296122 UBR1Q8IWV7 1749 aa17.2■□□□□ 0.34
PPP1CB-201ENST00000296122 RRP7AQ9Y3A4 280 aaKnown RBP17.19■□□□□ 0.34
PPP1CB-201ENST00000296122 RIMS1Q86UR5 1692 aaKnown RBP17.19■□□□□ 0.34
PPP1CB-201ENST00000296122 TECPR2O15040 1411 aa17.19■□□□□ 0.34
PPP1CB-201ENST00000296122 ACEP12821 1306 aa17.19■□□□□ 0.34
PPP1CB-201ENST00000296122 NCKAP5LQ9HCH0 1330 aa17.19■□□□□ 0.34
PPP1CB-201ENST00000296122 MYOM1P52179 1685 aa17.19■□□□□ 0.34
PPP1CB-201ENST00000296122 CCDC136Q96JN2 1154 aa17.18■□□□□ 0.34
PPP1CB-201ENST00000296122 ATP7BP35670 1465 aa17.18■□□□□ 0.34
PPP1CB-201ENST00000296122 E9PSI1 815 aa17.18■□□□□ 0.34
PPP1CB-201ENST00000296122 BLMP54132 1417 aaPredicted RBP17.17■□□□□ 0.34
PPP1CB-201ENST00000296122 TCP11L2Q8N4U5 519 aa17.17■□□□□ 0.34
PPP1CB-201ENST00000296122 EDC4Q6P2E9 1401 aaKnown RBP17.17■□□□□ 0.34
PPP1CB-201ENST00000296122 PROSER2Q86WR7 435 aaPredicted RBP17.17■□□□□ 0.34
PPP1CB-201ENST00000296122 PIK3R4Q99570 1358 aa17.17■□□□□ 0.34
PPP1CB-201ENST00000296122 SLIT1O75093 1534 aa17.16■□□□□ 0.34
PPP1CB-201ENST00000296122 CEP170BQ9Y4F5 1589 aaPredicted RBP17.15■□□□□ 0.34
PPP1CB-201ENST00000296122 ARHGAP23Q9P227 1491 aa17.15■□□□□ 0.34
PPP1CB-201ENST00000296122 LMOD2Q6P5Q4 547 aa17.15■□□□□ 0.34
PPP1CB-201ENST00000296122 TTC21BQ7Z4L5 1316 aa17.13■□□□□ 0.33
PPP1CB-201ENST00000296122 PLEKHG3A1L390 1219 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms