RNA–Protein interactions for RNA: ENST00000295454.7

GABRB1-201, Transcript of gamma-aminobutyric acid type A receptor beta1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB1, Length 2,143 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB1-201ENST00000295454 CEBPAP49715 358 aaPredicted RBP24.31■■□□□ 1.48
GABRB1-201ENST00000295454 POGKQ9P215 609 aa24.29■■□□□ 1.48
GABRB1-201ENST00000295454 ADAMTS8Q9UP79 889 aa24.29■■□□□ 1.48
GABRB1-201ENST00000295454 PLEKHH1Q9ULM0 1364 aa24.29■■□□□ 1.48
GABRB1-201ENST00000295454 DLC1Q96QB1 1528 aa24.27■■□□□ 1.48
GABRB1-201ENST00000295454 PUS7Q96PZ0 661 aaKnown RBP24.27■■□□□ 1.48
GABRB1-201ENST00000295454 INSRP06213 1382 aa24.27■■□□□ 1.48
GABRB1-201ENST00000295454 METP08581 1390 aa24.26■■□□□ 1.47
GABRB1-201ENST00000295454 ANKRD36BQ8N2N9 1353 aa24.26■■□□□ 1.47
GABRB1-201ENST00000295454 SRPK2P78362 688 aaKnown RBP24.26■■□□□ 1.47
GABRB1-201ENST00000295454 WAPLQ7Z5K2 1190 aa24.25■■□□□ 1.47
GABRB1-201ENST00000295454 PLPPR3Q6T4P5 718 aa24.25■■□□□ 1.47
GABRB1-201ENST00000295454 TMEM2Q9UHN6 1383 aa24.24■■□□□ 1.47
GABRB1-201ENST00000295454 A0A1W2PP64 1363 aa24.23■■□□□ 1.47
GABRB1-201ENST00000295454 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.22■■□□□ 1.47
GABRB1-201ENST00000295454 WDR43Q15061 677 aaKnown RBP eCLIP24.22■■□□□ 1.47
GABRB1-201ENST00000295454 CD163L1Q9NR16 1453 aa24.22■■□□□ 1.47
GABRB1-201ENST00000295454 KNDC1Q76NI1 1749 aa24.21■■□□□ 1.47
GABRB1-201ENST00000295454 TNNT2P45379 298 aaPredicted RBP24.21■■□□□ 1.47
GABRB1-201ENST00000295454 SHPRHQ149N8 1683 aa24.21■■□□□ 1.47
GABRB1-201ENST00000295454 MORC1Q86VD1 984 aa24.2■■□□□ 1.46
GABRB1-201ENST00000295454 CDCA7LQ96GN5 454 aa24.19■■□□□ 1.46
GABRB1-201ENST00000295454 CDK19Q9BWU1 502 aa24.19■■□□□ 1.46
GABRB1-201ENST00000295454 ABCC11Q96J66 1382 aa24.19■■□□□ 1.46
GABRB1-201ENST00000295454 NLRP1Q9C000 1473 aa24.18■■□□□ 1.46
GABRB1-201ENST00000295454 ATAD2Q6PL18 1390 aa24.18■■□□□ 1.46
GABRB1-201ENST00000295454 CGNL1Q0VF96 1302 aa24.17■■□□□ 1.46
GABRB1-201ENST00000295454 ADAMTS13Q76LX8 1427 aa24.16■■□□□ 1.46
GABRB1-201ENST00000295454 NINLQ9Y2I6 1382 aa24.16■■□□□ 1.46
GABRB1-201ENST00000295454 LTKP29376 864 aa24.16■■□□□ 1.46
GABRB1-201ENST00000295454 TXNDC2Q86VQ3 553 aa24.14■■□□□ 1.46
GABRB1-201ENST00000295454 CCDC146Q8IYE0 955 aa24.14■■□□□ 1.46
GABRB1-201ENST00000295454 ANKRD26Q9UPS8 1709 aa24.14■■□□□ 1.46
GABRB1-201ENST00000295454 CPS1P31327 1500 aa24.14■■□□□ 1.45
GABRB1-201ENST00000295454 POLR3AO14802 1390 aaPredicted RBP24.14■■□□□ 1.45
GABRB1-201ENST00000295454 RNF123Q5XPI4 1314 aa24.13■■□□□ 1.45
GABRB1-201ENST00000295454 TECPR2O15040 1411 aa24.11■■□□□ 1.45
GABRB1-201ENST00000295454 HDGFP51858 240 aaKnown RBP24.11■■□□□ 1.45
GABRB1-201ENST00000295454 KIF20BQ96Q89 1820 aa24.11■■□□□ 1.45
GABRB1-201ENST00000295454 PDE3BQ13370 1112 aa24.1■■□□□ 1.45
GABRB1-201ENST00000295454 CABP1Q9NZU7 370 aa24.1■■□□□ 1.45
GABRB1-201ENST00000295454 NSD2O96028 1365 aa24.1■■□□□ 1.45
GABRB1-201ENST00000295454 RIMS1Q86UR5 1692 aaKnown RBP24.09■■□□□ 1.45
GABRB1-201ENST00000295454 PLEKHG1Q9ULL1 1385 aa24.09■■□□□ 1.45
GABRB1-201ENST00000295454 GGNBP2Q9H3C7 697 aa24.08■■□□□ 1.45
GABRB1-201ENST00000295454 SLIT1O75093 1534 aa24.07■■□□□ 1.44
GABRB1-201ENST00000295454 ARHGAP23Q9P227 1491 aa24.07■■□□□ 1.44
GABRB1-201ENST00000295454 ROBO2Q9HCK4 1378 aa24.07■■□□□ 1.44
GABRB1-201ENST00000295454 MTHFSP49914 203 aa24.07■■□□□ 1.44
GABRB1-201ENST00000295454 FAM135BQ49AJ0 1406 aa24.06■■□□□ 1.44
GABRB1-201ENST00000295454 TERF2IPQ9NYB0 399 aa24.06■■□□□ 1.44
GABRB1-201ENST00000295454 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.05■■□□□ 1.44
GABRB1-201ENST00000295454 MED14O60244 1454 aa24.05■■□□□ 1.44
GABRB1-201ENST00000295454 ZNF521Q96K83 1311 aa24.05■■□□□ 1.44
GABRB1-201ENST00000295454 ERICH6BQ5W0A0 696 aa24.04■■□□□ 1.44
GABRB1-201ENST00000295454 PTPRUQ92729 1446 aa24.04■■□□□ 1.44
GABRB1-201ENST00000295454 WASLO00401 505 aaPredicted RBP24.04■■□□□ 1.44
GABRB1-201ENST00000295454 APAF1O14727 1248 aa24.03■■□□□ 1.44
GABRB1-201ENST00000295454 FYB1O15117 783 aa24.03■■□□□ 1.44
GABRB1-201ENST00000295454 SLC26A8Q96RN1 970 aa24.03■■□□□ 1.44
GABRB1-201ENST00000295454 PPP4R2Q9NY27 417 aa24.03■■□□□ 1.44
GABRB1-201ENST00000295454 PELP1Q8IZL8 1130 aaKnown RBP24.02■■□□□ 1.44
GABRB1-201ENST00000295454 RCAN3Q9UKA8 241 aa24.02■■□□□ 1.44
GABRB1-201ENST00000295454 NCKAP5LQ9HCH0 1330 aa24.02■■□□□ 1.44
GABRB1-201ENST00000295454 ATP7BP35670 1465 aa24.02■■□□□ 1.44
GABRB1-201ENST00000295454 HDGFL2Q7Z4V5 671 aaPredicted RBP24.02■■□□□ 1.44
GABRB1-201ENST00000295454 PPIP5K1Q6PFW1 1433 aa24.01■■□□□ 1.43
GABRB1-201ENST00000295454 SIRT1Q96EB6 747 aa23.99■■□□□ 1.43
GABRB1-201ENST00000295454 RRP1P56182 461 aaKnown RBP23.98■■□□□ 1.43
GABRB1-201ENST00000295454 B4GALNT3Q6L9W6 998 aa23.98■■□□□ 1.43
GABRB1-201ENST00000295454 CEP170BQ9Y4F5 1589 aaPredicted RBP23.98■■□□□ 1.43
GABRB1-201ENST00000295454 EID1Q9Y6B2 187 aa23.98■■□□□ 1.43
GABRB1-201ENST00000295454 MON2Q7Z3U7 1717 aa23.97■■□□□ 1.43
GABRB1-201ENST00000295454 AKAP12Q02952 1782 aa23.97■■□□□ 1.43
GABRB1-201ENST00000295454 ADGRB2O60241 1585 aa23.97■■□□□ 1.43
GABRB1-201ENST00000295454 CDC42BPGQ6DT37 1551 aa23.97■■□□□ 1.43
GABRB1-201ENST00000295454 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.97■■□□□ 1.43
GABRB1-201ENST00000295454 TSHZ2Q9NRE2 1034 aa23.97■■□□□ 1.43
GABRB1-201ENST00000295454 COL3A1P02461 1466 aaPredicted RBP23.97■■□□□ 1.43
GABRB1-201ENST00000295454 ITSN1Q15811 1721 aa23.97■■□□□ 1.43
GABRB1-201ENST00000295454 PRR36Q9H6K5 1346 aa23.96■■□□□ 1.43
GABRB1-201ENST00000295454 CPSF1Q10570 1443 aaKnown RBP23.96■■□□□ 1.43
GABRB1-201ENST00000295454 NUDT16Q96DE0 195 aaKnown RBP23.96■■□□□ 1.43
GABRB1-201ENST00000295454 IQSEC2Q5JU85 1478 aa23.96■■□□□ 1.43
GABRB1-201ENST00000295454 DUSP27Q5VZP5 1158 aa23.95■■□□□ 1.42
GABRB1-201ENST00000295454 SPINK5Q9NQ38 1064 aaPredicted RBP23.95■■□□□ 1.42
GABRB1-201ENST00000295454 DMRT2Q9Y5R5 561 aa23.95■■□□□ 1.42
GABRB1-201ENST00000295454 ADAMTSL3P82987 1691 aa23.95■■□□□ 1.42
GABRB1-201ENST00000295454 TOPAZ1Q8N9V7 1692 aa23.94■■□□□ 1.42
GABRB1-201ENST00000295454 CFAP53Q96M91 514 aa23.93■■□□□ 1.42
GABRB1-201ENST00000295454 GOLGA2Q08379 1002 aa23.93■■□□□ 1.42
GABRB1-201ENST00000295454 THEMISQ8N1K5 641 aaPredicted RBP23.92■■□□□ 1.42
GABRB1-201ENST00000295454 DNAJC5Q9H3Z4 198 aa23.92■■□□□ 1.42
GABRB1-201ENST00000295454 FBLN1P23142 703 aa23.91■■□□□ 1.42
GABRB1-201ENST00000295454 SLFN5Q08AF3 891 aa23.9■■□□□ 1.42
GABRB1-201ENST00000295454 RRP7AQ9Y3A4 280 aaKnown RBP23.9■■□□□ 1.42
GABRB1-201ENST00000295454 DIP2AQ14689 1571 aa23.9■■□□□ 1.42
GABRB1-201ENST00000295454 EDC4Q6P2E9 1401 aaKnown RBP23.89■■□□□ 1.42
GABRB1-201ENST00000295454 XRN1Q8IZH2 1706 aaKnown RBP23.89■■□□□ 1.42
GABRB1-201ENST00000295454 MAP2P11137 1827 aaKnown RBP23.89■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms