RNA–Protein interactions for RNA: ENST00000295317.3

RNF149-201, Transcript of ring finger protein 149, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF149, Length 2,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF149-201ENST00000295317 INSRP06213 1382 aa28.53■■■□□ 2.16
RNF149-201ENST00000295317 DMRT2Q9Y5R5 561 aa28.5■■■□□ 2.15
RNF149-201ENST00000295317 DUSP27Q5VZP5 1158 aa28.49■■■□□ 2.15
RNF149-201ENST00000295317 POGKQ9P215 609 aa28.49■■■□□ 2.15
RNF149-201ENST00000295317 CLTCQ00610 1675 aaKnown RBP28.48■■■□□ 2.15
RNF149-201ENST00000295317 ZNF521Q96K83 1311 aa28.48■■■□□ 2.15
RNF149-201ENST00000295317 C20orf194Q5TEA3 1177 aa28.48■■■□□ 2.15
RNF149-201ENST00000295317 GOLGA2Q08379 1002 aa28.46■■■□□ 2.15
RNF149-201ENST00000295317 ZFYVE9O95405 1425 aa28.45■■■□□ 2.15
RNF149-201ENST00000295317 MTHFSP49914 203 aa28.45■■■□□ 2.15
RNF149-201ENST00000295317 NEUROD2Q15784 382 aa28.45■■■□□ 2.15
RNF149-201ENST00000295317 CGNL1Q0VF96 1302 aa28.44■■■□□ 2.14
RNF149-201ENST00000295317 RRP7AQ9Y3A4 280 aaKnown RBP28.44■■■□□ 2.14
RNF149-201ENST00000295317 WAPLQ7Z5K2 1190 aa28.43■■■□□ 2.14
RNF149-201ENST00000295317 YTHDC2Q9H6S0 1430 aaKnown RBP28.43■■■□□ 2.14
RNF149-201ENST00000295317 CRBNQ96SW2 442 aa28.42■■■□□ 2.14
RNF149-201ENST00000295317 PTPRMP28827 1452 aa28.41■■■□□ 2.14
RNF149-201ENST00000295317 GGNBP2Q9H3C7 697 aa28.41■■■□□ 2.14
RNF149-201ENST00000295317 SLFN5Q08AF3 891 aa28.4■■■□□ 2.14
RNF149-201ENST00000295317 A0A1W2PP64 1363 aa28.39■■■□□ 2.14
RNF149-201ENST00000295317 ANKRD36BQ8N2N9 1353 aa28.39■■■□□ 2.14
RNF149-201ENST00000295317 KIF13AQ9H1H9 1805 aa28.39■■■□□ 2.13
RNF149-201ENST00000295317 POLR3AO14802 1390 aaPredicted RBP28.38■■■□□ 2.13
RNF149-201ENST00000295317 ALKQ9UM73 1620 aa28.38■■■□□ 2.13
RNF149-201ENST00000295317 SKAP1Q86WV1 359 aa28.36■■■□□ 2.13
RNF149-201ENST00000295317 AGLP35573 1532 aa28.36■■■□□ 2.13
RNF149-201ENST00000295317 A2ML1A8K2U0 1454 aa28.36■■■□□ 2.13
RNF149-201ENST00000295317 ESF1Q9H501 851 aaKnown RBP28.36■■■□□ 2.13
RNF149-201ENST00000295317 CDK19Q9BWU1 502 aa28.35■■■□□ 2.13
RNF149-201ENST00000295317 MSH5O43196 834 aa28.34■■■□□ 2.13
RNF149-201ENST00000295317 RIMS2Q9UQ26 1411 aa28.33■■■□□ 2.13
RNF149-201ENST00000295317 PLPPR3Q6T4P5 718 aa28.33■■■□□ 2.13
RNF149-201ENST00000295317 CABP1Q9NZU7 370 aa28.32■■■□□ 2.12
RNF149-201ENST00000295317 ZMYM3Q14202 1370 aa28.32■■■□□ 2.12
RNF149-201ENST00000295317 REREQ9P2R6 1566 aa28.31■■■□□ 2.12
RNF149-201ENST00000295317 PPP6R1Q9UPN7 881 aa28.31■■■□□ 2.12
RNF149-201ENST00000295317 FBLN1P23142 703 aa28.3■■■□□ 2.12
RNF149-201ENST00000295317 BCAR3O75815 825 aa28.29■■■□□ 2.12
RNF149-201ENST00000295317 WWC1Q8IX03 1113 aa28.29■■■□□ 2.12
RNF149-201ENST00000295317 PUS7Q96PZ0 661 aaKnown RBP28.29■■■□□ 2.12
RNF149-201ENST00000295317 TCP11L2Q8N4U5 519 aa28.29■■■□□ 2.12
RNF149-201ENST00000295317 SHPRHQ149N8 1683 aa28.28■■■□□ 2.12
RNF149-201ENST00000295317 TRMT2AQ8IZ69 625 aaKnown RBP28.28■■■□□ 2.12
RNF149-201ENST00000295317 ARHGEF40Q8TER5 1519 aa28.28■■■□□ 2.12
RNF149-201ENST00000295317 FYB1O15117 783 aa28.27■■■□□ 2.12
RNF149-201ENST00000295317 SPATA31D1Q6ZQQ2 1576 aa28.27■■■□□ 2.12
RNF149-201ENST00000295317 U2AF1L5P0DN76 240 aaPredicted RBP28.26■■■□□ 2.11
RNF149-201ENST00000295317 U2AF1Q01081 240 aaKnown RBP eCLIP28.26■■■□□ 2.111e-12■■■■■ 46.6
RNF149-201ENST00000295317 TXNDC2Q86VQ3 553 aa28.26■■■□□ 2.11
RNF149-201ENST00000295317 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.25■■■□□ 2.11
RNF149-201ENST00000295317 CD163L1Q9NR16 1453 aa28.25■■■□□ 2.11
RNF149-201ENST00000295317 METP08581 1390 aa28.24■■■□□ 2.11
RNF149-201ENST00000295317 ABCC11Q96J66 1382 aa28.24■■■□□ 2.11
RNF149-201ENST00000295317 CEBPAP49715 358 aaPredicted RBP28.24■■■□□ 2.11
RNF149-201ENST00000295317 RUNDC1Q96C34 613 aa28.24■■■□□ 2.11
RNF149-201ENST00000295317 CFAP53Q96M91 514 aa28.24■■■□□ 2.11
RNF149-201ENST00000295317 NCKAP5LQ9HCH0 1330 aa28.23■■■□□ 2.11
RNF149-201ENST00000295317 TERF2IPQ9NYB0 399 aa28.23■■■□□ 2.11
RNF149-201ENST00000295317 ATAD2Q6PL18 1390 aa28.22■■■□□ 2.11
RNF149-201ENST00000295317 E9PSI1 815 aa28.22■■■□□ 2.11
RNF149-201ENST00000295317 U2SURPO15042 1029 aaKnown RBP28.21■■■□□ 2.11
RNF149-201ENST00000295317 USP32Q8NFA0 1604 aa28.21■■■□□ 2.11
RNF149-201ENST00000295317 NKTRP30414 1462 aaKnown RBP28.19■■■□□ 2.1
RNF149-201ENST00000295317 FANCIQ9NVI1 1328 aa28.18■■■□□ 2.1
RNF149-201ENST00000295317 HDGFL2Q7Z4V5 671 aaPredicted RBP28.17■■■□□ 2.1
RNF149-201ENST00000295317 NSD2O96028 1365 aa28.16■■■□□ 2.1
RNF149-201ENST00000295317 PPM1GO15355 546 aaPredicted RBP28.16■■■□□ 2.1
RNF149-201ENST00000295317 TNRQ92752 1358 aa28.13■■■□□ 2.09
RNF149-201ENST00000295317 NINLQ9Y2I6 1382 aa28.13■■■□□ 2.09
RNF149-201ENST00000295317 NLRP1Q9C000 1473 aa28.12■■■□□ 2.09
RNF149-201ENST00000295317 BCL2L13Q9BXK5 485 aa28.12■■■□□ 2.09
RNF149-201ENST00000295317 ZRANB1Q9UGI0 708 aa28.12■■■□□ 2.09
RNF149-201ENST00000295317 SETD1AO15047 1707 aaKnown RBP28.11■■■□□ 2.09
RNF149-201ENST00000295317 ANP32EQ9BTT0 268 aa28.11■■■□□ 2.09
RNF149-201ENST00000295317 NRXN3Q9Y4C0 1643 aa28.11■■■□□ 2.09
RNF149-201ENST00000295317 IQSEC2Q5JU85 1478 aa28.11■■■□□ 2.09
RNF149-201ENST00000295317 NUTM2FA1L443 756 aa28.1■■■□□ 2.09
RNF149-201ENST00000295317 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.09■■■□□ 2.09
RNF149-201ENST00000295317 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.08■■■□□ 2.09
RNF149-201ENST00000295317 WASLO00401 505 aaPredicted RBP28.08■■■□□ 2.09
RNF149-201ENST00000295317 FRAT1Q92837 279 aaPredicted RBP28.08■■■□□ 2.09
RNF149-201ENST00000295317 LTKP29376 864 aa28.07■■■□□ 2.08
RNF149-201ENST00000295317 PHF23Q9BUL5 403 aaPredicted RBP28.07■■■□□ 2.08
RNF149-201ENST00000295317 PANK1Q8TE04 598 aa28.06■■■□□ 2.08
RNF149-201ENST00000295317 NME9Q86XW9 330 aa28.06■■■□□ 2.08
RNF149-201ENST00000295317 TNNQ9UQP3 1299 aa28.06■■■□□ 2.08
RNF149-201ENST00000295317 NGEFQ8N5V2 710 aa28.04■■■□□ 2.08
RNF149-201ENST00000295317 SLC26A8Q96RN1 970 aa28.04■■■□□ 2.08
RNF149-201ENST00000295317 TSR2Q969E8 191 aaKnown RBP28.04■■■□□ 2.08
RNF149-201ENST00000295317 TMEM2Q9UHN6 1383 aa28.03■■■□□ 2.08
RNF149-201ENST00000295317 NUDT16Q96DE0 195 aaKnown RBP28.03■■■□□ 2.08
RNF149-201ENST00000295317 PLEKHF1Q96S99 279 aa28.03■■■□□ 2.08
RNF149-201ENST00000295317 CANXP27824 592 aaKnown RBP28.02■■■□□ 2.08
RNF149-201ENST00000295317 PPIP5K1Q6PFW1 1433 aa28.02■■■□□ 2.08
RNF149-201ENST00000295317 DLC1Q96QB1 1528 aa28.01■■■□□ 2.07
RNF149-201ENST00000295317 COL3A1P02461 1466 aaPredicted RBP28.01■■■□□ 2.07
RNF149-201ENST00000295317 COG6Q9Y2V7 657 aa28.01■■■□□ 2.07
RNF149-201ENST00000295317 DIAPH1O60610 1272 aaKnown RBP28■■■□□ 2.07
RNF149-201ENST00000295317 POLKQ9UBT6 870 aa28■■■□□ 2.07
RNF149-201ENST00000295317 KDM2BQ8NHM5 1336 aa28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms