RNA–Protein interactions for RNA: ENST00000290776.12

CPNE2-201, Transcript of copine 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE2, Length 2,645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2-201ENST00000290776 NINLQ9Y2I6 1382 aa27.11■■□□□ 1.93
CPNE2-201ENST00000290776 VWDEQ8N2E2 1590 aa27.11■■□□□ 1.93
CPNE2-201ENST00000290776 NOS1P29475 1434 aa27.11■■□□□ 1.93
CPNE2-201ENST00000290776 CFAP65Q6ZU64 1925 aaKnown RBP27.1■■□□□ 1.93
CPNE2-201ENST00000290776 TMEM132EQ6IEE7 984 aa27.1■■□□□ 1.93
CPNE2-201ENST00000290776 SHPRHQ149N8 1683 aa27.09■■□□□ 1.93
CPNE2-201ENST00000290776 INO80Q9ULG1 1556 aaPredicted RBP27.09■■□□□ 1.93
CPNE2-201ENST00000290776 MTHFSP49914 203 aa27.08■■□□□ 1.93
CPNE2-201ENST00000290776 UHRF1BP1LA0JNW5 1464 aa27.08■■□□□ 1.93
CPNE2-201ENST00000290776 BECN1Q14457 450 aa27.06■■□□□ 1.92
CPNE2-201ENST00000290776 MROH1Q8NDA8 1641 aa27.06■■□□□ 1.92
CPNE2-201ENST00000290776 ADGRL1O94910 1474 aa27.06■■□□□ 1.92
CPNE2-201ENST00000290776 PMFBP1Q8TBY8 1022 aa27.05■■□□□ 1.92
CPNE2-201ENST00000290776 PDZRN3Q9UPQ7 1066 aa27.04■■□□□ 1.92
CPNE2-201ENST00000290776 POGKQ9P215 609 aa27.04■■□□□ 1.92
CPNE2-201ENST00000290776 IFT172Q9UG01 1749 aa27.03■■□□□ 1.92
CPNE2-201ENST00000290776 NLRP1Q9C000 1473 aa27.02■■□□□ 1.92
CPNE2-201ENST00000290776 SENP3Q9H4L4 574 aaPredicted RBP27.02■■□□□ 1.92
CPNE2-201ENST00000290776 EFCAB6Q5THR3 1501 aa27.02■■□□□ 1.92
CPNE2-201ENST00000290776 ARAP3Q8WWN8 1544 aa27.02■■□□□ 1.92
CPNE2-201ENST00000290776 NUTM2DQ5VT03 806 aaPredicted RBP27.02■■□□□ 1.92
CPNE2-201ENST00000290776 SBNO2Q9Y2G9 1366 aa27.01■■□□□ 1.92
CPNE2-201ENST00000290776 UPF2Q9HAU5 1272 aaKnown RBP27.01■■□□□ 1.91
CPNE2-201ENST00000290776 PPRC1Q5VV67 1664 aaKnown RBP27.01■■□□□ 1.91
CPNE2-201ENST00000290776 IQSEC2Q5JU85 1478 aa27.01■■□□□ 1.91
CPNE2-201ENST00000290776 MYO3AQ8NEV4 1616 aa27■■□□□ 1.91
CPNE2-201ENST00000290776 U2AF1L5P0DN76 240 aaPredicted RBP27■■□□□ 1.91
CPNE2-201ENST00000290776 U2AF1Q01081 240 aaKnown RBP eCLIP27■■□□□ 1.91
CPNE2-201ENST00000290776 NEURL4Q96JN8 1562 aa27■■□□□ 1.91
CPNE2-201ENST00000290776 SPRYD3Q8NCJ5 442 aa26.99■■□□□ 1.91
CPNE2-201ENST00000290776 CFAP53Q96M91 514 aa26.99■■□□□ 1.91
CPNE2-201ENST00000290776 WDR63Q8IWG1 891 aa26.99■■□□□ 1.91
CPNE2-201ENST00000290776 QRICH2Q9H0J4 1663 aa26.99■■□□□ 1.91
CPNE2-201ENST00000290776 ABCA9Q8IUA7 1624 aa26.97■■□□□ 1.91
CPNE2-201ENST00000290776 PHF23Q9BUL5 403 aaPredicted RBP26.97■■□□□ 1.91
CPNE2-201ENST00000290776 NRXN1Q9ULB1 1477 aa26.97■■□□□ 1.91
CPNE2-201ENST00000290776 TSR2Q969E8 191 aaKnown RBP26.96■■□□□ 1.91
CPNE2-201ENST00000290776 GGT6Q6P531 493 aa26.96■■□□□ 1.91
CPNE2-201ENST00000290776 RWDD1Q9H446 243 aaPredicted RBP26.96■■□□□ 1.91
CPNE2-201ENST00000290776 FTSJ3Q8IY81 847 aaKnown RBP26.95■■□□□ 1.91
CPNE2-201ENST00000290776 SAFB2Q14151 953 aaKnown RBP eCLIP26.95■■□□□ 1.9
CPNE2-201ENST00000290776 TBC1D32Q96NH3 1257 aa26.95■■□□□ 1.9
CPNE2-201ENST00000290776 ZNF518AQ6AHZ1 1483 aa26.94■■□□□ 1.9
CPNE2-201ENST00000290776 MYH16Q9H6N6 1097 aa26.94■■□□□ 1.9
CPNE2-201ENST00000290776 C14orf93Q9H972 538 aaKnown RBP26.94■■□□□ 1.9
CPNE2-201ENST00000290776 ARXQ96QS3 562 aa26.93■■□□□ 1.9
CPNE2-201ENST00000290776 TBC1D2Q9BYX2 928 aa26.93■■□□□ 1.9
CPNE2-201ENST00000290776 MVPQ14764 893 aaKnown RBP26.92■■□□□ 1.9
CPNE2-201ENST00000290776 ADGRB3O60242 1522 aa26.92■■□□□ 1.9
CPNE2-201ENST00000290776 ANTXR1Q9H6X2 564 aa26.9■■□□□ 1.9
CPNE2-201ENST00000290776 ZC3H13Q5T200 1668 aaKnown RBP26.9■■□□□ 1.9
CPNE2-201ENST00000290776 SETBP1Q9Y6X0 1596 aa26.9■■□□□ 1.9
CPNE2-201ENST00000290776 ZKSCAN2Q63HK3 967 aa26.89■■□□□ 1.9
CPNE2-201ENST00000290776 CABP2Q9NPB3 220 aa26.89■■□□□ 1.9
CPNE2-201ENST00000290776 U2SURPO15042 1029 aaKnown RBP26.89■■□□□ 1.9
CPNE2-201ENST00000290776 KIDINS220Q9ULH0 1771 aa26.89■■□□□ 1.89
CPNE2-201ENST00000290776 AAMPQ13685 434 aa26.88■■□□□ 1.89
CPNE2-201ENST00000290776 CCDC27Q2M243 656 aa26.88■■□□□ 1.89
CPNE2-201ENST00000290776 SMC4Q9NTJ3 1288 aa26.88■■□□□ 1.89
CPNE2-201ENST00000290776 DZIP1LQ8IYY4 767 aaKnown RBP26.88■■□□□ 1.89
CPNE2-201ENST00000290776 ADGRB1O14514 1584 aa26.87■■□□□ 1.89
CPNE2-201ENST00000290776 NPATQ14207 1427 aa26.86■■□□□ 1.89
CPNE2-201ENST00000290776 MFAP1P55081 439 aaKnown RBP26.86■■□□□ 1.89
CPNE2-201ENST00000290776 PPLO60437 1756 aa26.85■■□□□ 1.89
CPNE2-201ENST00000290776 EXOSC9Q06265 439 aaKnown RBP26.85■■□□□ 1.89
CPNE2-201ENST00000290776 ITPRIPQ8IWB1 547 aa26.85■■□□□ 1.89
CPNE2-201ENST00000290776 EVC2Q86UK5 1308 aa26.84■■□□□ 1.89
CPNE2-201ENST00000290776 TRIM27P14373 513 aa26.82■■□□□ 1.88
CPNE2-201ENST00000290776 GGNBP2Q9H3C7 697 aa26.82■■□□□ 1.88
CPNE2-201ENST00000290776 ANKRD36BQ8N2N9 1353 aa26.8■■□□□ 1.88
CPNE2-201ENST00000290776 EIF5BO60841 1220 aaKnown RBP26.8■■□□□ 1.88
CPNE2-201ENST00000290776 STK26Q9P289 416 aa26.8■■□□□ 1.88
CPNE2-201ENST00000290776 SSH1Q8WYL5 1049 aa26.8■■□□□ 1.88
CPNE2-201ENST00000290776 C22orf23Q9BZE7 217 aa26.79■■□□□ 1.88
CPNE2-201ENST00000290776 GZF1Q9H116 711 aaPredicted RBP26.79■■□□□ 1.88
CPNE2-201ENST00000290776 ASXL2Q76L83 1435 aa26.79■■□□□ 1.88
CPNE2-201ENST00000290776 USP32Q8NFA0 1604 aa26.79■■□□□ 1.88
CPNE2-201ENST00000290776 PRKCSHP14314 528 aaPredicted RBP26.79■■□□□ 1.88
CPNE2-201ENST00000290776 LMTK2Q8IWU2 1503 aa26.78■■□□□ 1.88
CPNE2-201ENST00000290776 TULP4Q9NRJ4 1543 aa26.78■■□□□ 1.88
CPNE2-201ENST00000290776 GLI2P10070 1586 aa26.77■■□□□ 1.88
CPNE2-201ENST00000290776 SRPK2P78362 688 aaKnown RBP26.77■■□□□ 1.88
CPNE2-201ENST00000290776 ZMYM3Q14202 1370 aa26.77■■□□□ 1.88
CPNE2-201ENST00000290776 TMPOP42166 694 aaKnown RBP26.76■■□□□ 1.87
CPNE2-201ENST00000290776 FAM43AQ8N2R8 423 aa26.76■■□□□ 1.87
CPNE2-201ENST00000290776 NOB1Q9ULX3 412 aaKnown RBP26.76■■□□□ 1.87
CPNE2-201ENST00000290776 CD109Q6YHK3 1445 aa26.75■■□□□ 1.87
CPNE2-201ENST00000290776 TRIM35Q9UPQ4 493 aa26.75■■□□□ 1.87
CPNE2-201ENST00000290776 ATF7IPQ6VMQ6 1270 aa26.73■■□□□ 1.87
CPNE2-201ENST00000290776 A0A1W2PP64 1363 aa26.73■■□□□ 1.87
CPNE2-201ENST00000290776 ADGRB2O60241 1585 aa26.73■■□□□ 1.87
CPNE2-201ENST00000290776 DDX19BQ9UMR2 479 aa26.73■■□□□ 1.87
CPNE2-201ENST00000290776 TMEM57Q8N5G2 664 aa26.72■■□□□ 1.87
CPNE2-201ENST00000290776 PLEKHF1Q96S99 279 aa26.72■■□□□ 1.87
CPNE2-201ENST00000290776 NSD2O96028 1365 aa26.72■■□□□ 1.87
CPNE2-201ENST00000290776 ARHGEF28Q8N1W1 1705 aaKnown RBP26.71■■□□□ 1.87
CPNE2-201ENST00000290776 RPGRIP1LQ68CZ1 1315 aa26.71■■□□□ 1.87
CPNE2-201ENST00000290776 RIPK4P57078 832 aa26.7■■□□□ 1.86
CPNE2-201ENST00000290776 L1TD1Q5T7N2 865 aaKnown RBP26.7■■□□□ 1.86
CPNE2-201ENST00000290776 MCM4P33991 863 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms