RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 TNNT3P45378 269 aaPredicted RBP17.92■□□□□ 0.46
SEC16A-202ENST00000290037 TRDNQ13061 729 aa17.92■□□□□ 0.46
SEC16A-202ENST00000290037 HNRNPMP52272 730 aaKnown RBP eCLIP17.92■□□□□ 0.464e-12■■■□□ 17.4
SEC16A-202ENST00000290037 ANKRD1Q15327 319 aa17.91■□□□□ 0.46
SEC16A-202ENST00000290037 TEFQ10587 303 aa17.91■□□□□ 0.46
SEC16A-202ENST00000290037 MRE11P49959 708 aa17.91■□□□□ 0.46
SEC16A-202ENST00000290037 PLEKHH1Q9ULM0 1364 aa17.91■□□□□ 0.46
SEC16A-202ENST00000290037 WDR63Q8IWG1 891 aa17.91■□□□□ 0.46
SEC16A-202ENST00000290037 RABEP1Q15276 862 aa17.9■□□□□ 0.46
SEC16A-202ENST00000290037 GAS2L2Q8NHY3 880 aa17.9■□□□□ 0.46
SEC16A-202ENST00000290037 TTC5Q8N0Z6 440 aa17.9■□□□□ 0.46
SEC16A-202ENST00000290037 BRMS1Q9HCU9 246 aa17.9■□□□□ 0.46
SEC16A-202ENST00000290037 SAFBQ15424 915 aaKnown RBP eCLIP17.9■□□□□ 0.46
SEC16A-202ENST00000290037 CCDC39Q9UFE4 941 aa17.9■□□□□ 0.46
SEC16A-202ENST00000290037 DDX49Q9Y6V7 483 aaKnown RBP17.89■□□□□ 0.46
SEC16A-202ENST00000290037 HSP90AA2PQ14568 343 aaPredicted RBP17.89■□□□□ 0.45
SEC16A-202ENST00000290037 CDC45O75419 566 aa17.88■□□□□ 0.45
SEC16A-202ENST00000290037 RASSF8Q8NHQ8 419 aa17.88■□□□□ 0.45
SEC16A-202ENST00000290037 PCF11O94913 1555 aaKnown RBP17.88■□□□□ 0.45
SEC16A-202ENST00000290037 CLUAP1Q96AJ1 413 aa17.88■□□□□ 0.45
SEC16A-202ENST00000290037 ZNF692Q9BU19 519 aaPredicted RBP17.88■□□□□ 0.45
SEC16A-202ENST00000290037 TPD52L1Q16890 204 aaPredicted RBP17.88■□□□□ 0.45
SEC16A-202ENST00000290037 PPP6R1Q9UPN7 881 aa17.87■□□□□ 0.45
SEC16A-202ENST00000290037 CWC15Q9P013 229 aaKnown RBP17.86■□□□□ 0.45
SEC16A-202ENST00000290037 JMYQ8N9B5 988 aa17.86■□□□□ 0.45
SEC16A-202ENST00000290037 STK26Q9P289 416 aa17.85■□□□□ 0.45
SEC16A-202ENST00000290037 OSCARQ8IYS5 282 aa17.85■□□□□ 0.45
SEC16A-202ENST00000290037 AK7Q96M32 723 aa17.85■□□□□ 0.45
SEC16A-202ENST00000290037 C9orf78Q9NZ63 289 aaPredicted RBP17.85■□□□□ 0.45
SEC16A-202ENST00000290037 LUC7LQ9NQ29 371 aaKnown RBP17.84■□□□□ 0.45
SEC16A-202ENST00000290037 NUP160Q12769 1436 aa17.84■□□□□ 0.45
SEC16A-202ENST00000290037 ERICH2A1L162 156 aa17.84■□□□□ 0.45
SEC16A-202ENST00000290037 SLKQ9H2G2 1235 aaPredicted RBP17.84■□□□□ 0.45
SEC16A-202ENST00000290037 PAK3O75914 559 aaPredicted RBP17.84■□□□□ 0.45
SEC16A-202ENST00000290037 IFIT2P09913 472 aaKnown RBP17.84■□□□□ 0.45
SEC16A-202ENST00000290037 AEBP1Q8IUX7 1158 aa17.83■□□□□ 0.45
SEC16A-202ENST00000290037 RUSC2Q8N2Y8 1516 aa17.83■□□□□ 0.44
SEC16A-202ENST00000290037 G3BP1Q13283 466 aaKnown RBP eCLIP17.83■□□□□ 0.442e-6■■■□□ 18.6
SEC16A-202ENST00000290037 CCDC73Q6ZRK6 1079 aa17.83■□□□□ 0.44
SEC16A-202ENST00000290037 SART3Q15020 963 aaKnown RBP17.82■□□□□ 0.44
SEC16A-202ENST00000290037 CCT4P50991 539 aaKnown RBP17.82■□□□□ 0.44
SEC16A-202ENST00000290037 CNTROBQ8N137 903 aa17.82■□□□□ 0.44
SEC16A-202ENST00000290037 CALRP27797 417 aaKnown RBP17.82■□□□□ 0.44
SEC16A-202ENST00000290037 GPRASP1Q5JY77 1395 aa17.82■□□□□ 0.44
SEC16A-202ENST00000290037 CPLX1O14810 134 aa17.82■□□□□ 0.44
SEC16A-202ENST00000290037 ANKRD45Q5TZF3 282 aa17.81■□□□□ 0.44
SEC16A-202ENST00000290037 DCTN1Q14203 1278 aa17.81■□□□□ 0.44
SEC16A-202ENST00000290037 KIF2AO00139 706 aaPredicted RBP17.8■□□□□ 0.44
SEC16A-202ENST00000290037 ERBINQ96RT1 1412 aa17.8■□□□□ 0.44
SEC16A-202ENST00000290037 CCDC30Q5VVM6 783 aa17.8■□□□□ 0.44
SEC16A-202ENST00000290037 SLC3A2P08195 630 aaKnown RBP17.8■□□□□ 0.44
SEC16A-202ENST00000290037 PRKCSHP14314 528 aaPredicted RBP17.79■□□□□ 0.44
SEC16A-202ENST00000290037 CCDC173Q0VFZ6 552 aa17.79■□□□□ 0.44
SEC16A-202ENST00000290037 SASS6Q6UVJ0 657 aa17.79■□□□□ 0.44
SEC16A-202ENST00000290037 DACH1Q9UI36 760 aa17.79■□□□□ 0.44
SEC16A-202ENST00000290037 TAF3Q5VWG9 929 aa17.78■□□□□ 0.44
SEC16A-202ENST00000290037 ZNF396Q96N95 335 aaPredicted RBP17.78■□□□□ 0.44
SEC16A-202ENST00000290037 RAD54L2Q9Y4B4 1467 aa17.78■□□□□ 0.44
SEC16A-202ENST00000290037 RALGAPBQ86X10 1494 aa17.78■□□□□ 0.44
SEC16A-202ENST00000290037 ADGBQ8N7X0 1667 aa17.78■□□□□ 0.44
SEC16A-202ENST00000290037 ARHGEF12Q9NZN5 1544 aa17.78■□□□□ 0.44
SEC16A-202ENST00000290037 CAVIN2O95810 425 aa17.77■□□□□ 0.44
SEC16A-202ENST00000290037 SMC3Q9UQE7 1217 aa17.77■□□□□ 0.44
SEC16A-202ENST00000290037 IQCEQ6IPM2 695 aa17.77■□□□□ 0.44
SEC16A-202ENST00000290037 C22orf23Q9BZE7 217 aa17.77■□□□□ 0.43
SEC16A-202ENST00000290037 CCDC66A2RUB6 948 aa17.76■□□□□ 0.43
SEC16A-202ENST00000290037 OLFM4Q6UX06 510 aa17.76■□□□□ 0.43
SEC16A-202ENST00000290037 HSP90B2PQ58FF3 399 aa17.76■□□□□ 0.43
SEC16A-202ENST00000290037 CAMSAP2Q08AD1 1489 aa17.75■□□□□ 0.43
SEC16A-202ENST00000290037 CHMP3Q9Y3E7 222 aa17.75■□□□□ 0.43
SEC16A-202ENST00000290037 PDCL2Q8N4E4 241 aa17.75■□□□□ 0.43
SEC16A-202ENST00000290037 FOXD1Q16676 465 aa17.75■□□□□ 0.43
SEC16A-202ENST00000290037 SLC4A10Q6U841 1118 aa17.75■□□□□ 0.43
SEC16A-202ENST00000290037 PKNOX2Q96KN3 472 aa17.75■□□□□ 0.43
SEC16A-202ENST00000290037 G3V3G9 751 aa17.75■□□□□ 0.43
SEC16A-202ENST00000290037 RIPK4P57078 832 aa17.75■□□□□ 0.43
SEC16A-202ENST00000290037 DCAF8Q5TAQ9 597 aa17.75■□□□□ 0.43
SEC16A-202ENST00000290037 KRT32Q14532 448 aa17.75■□□□□ 0.43
SEC16A-202ENST00000290037 CAGE1Q8TC20 777 aa17.74■□□□□ 0.43
SEC16A-202ENST00000290037 PSME1Q06323 249 aa17.74■□□□□ 0.43
SEC16A-202ENST00000290037 RAPGEF6Q8TEU7 1601 aa17.74■□□□□ 0.43
SEC16A-202ENST00000290037 MARCH6O60337 910 aa17.74■□□□□ 0.43
SEC16A-202ENST00000290037 SMARCE1Q969G3 411 aa17.74■□□□□ 0.43
SEC16A-202ENST00000290037 FAM43AQ8N2R8 423 aa17.74■□□□□ 0.43
SEC16A-202ENST00000290037 RALYLQ86SE5 291 aaKnown RBP17.74■□□□□ 0.43
SEC16A-202ENST00000290037 ZSCAN25Q6NSZ9 544 aa17.74■□□□□ 0.43
SEC16A-202ENST00000290037 CDKL5O76039 1030 aa17.73■□□□□ 0.43
SEC16A-202ENST00000290037 TXLNAP40222 546 aa17.73■□□□□ 0.43
SEC16A-202ENST00000290037 TCEAL9Q9UHQ7 104 aa17.73■□□□□ 0.43
SEC16A-202ENST00000290037 PRG4Q92954 1404 aaPredicted RBP17.73■□□□□ 0.43
SEC16A-202ENST00000290037 SHANK2Q9UPX8 1470 aa17.72■□□□□ 0.43
SEC16A-202ENST00000290037 GTF2E1P29083 439 aaPredicted RBP17.71■□□□□ 0.43
SEC16A-202ENST00000290037 RUFY1Q96T51 708 aa17.71■□□□□ 0.43
SEC16A-202ENST00000290037 TRAK1Q9UPV9 953 aa17.71■□□□□ 0.43
SEC16A-202ENST00000290037 CLSTN1O94985 981 aa17.71■□□□□ 0.42
SEC16A-202ENST00000290037 ZSCAN31Q96LW9 406 aaPredicted RBP17.71■□□□□ 0.42
SEC16A-202ENST00000290037 TRIM34Q9BYJ4 488 aa17.71■□□□□ 0.42
SEC16A-202ENST00000290037 CLASRPQ8N2M8 674 aaKnown RBP17.7■□□□□ 0.42
SEC16A-202ENST00000290037 CRBNQ96SW2 442 aa17.7■□□□□ 0.42
SEC16A-202ENST00000290037 INSRP06213 1382 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms