RNA–Protein interactions for RNA: ENST00000288873.7

KRTCAP3-201, Transcript of keratinocyte associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRTCAP3, Length 872 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3-201ENST00000288873 CARD11Q9BXL7 1154 aa27.39■■□□□ 1.98
KRTCAP3-201ENST00000288873 NALCNQ8IZF0 1738 aa27.38■■□□□ 1.97
KRTCAP3-201ENST00000288873 SAFB2Q14151 953 aaKnown RBP eCLIP27.37■■□□□ 1.97
KRTCAP3-201ENST00000288873 C19orf44Q9H6X5 657 aa27.37■■□□□ 1.97
KRTCAP3-201ENST00000288873 ADGRL3Q9HAR2 1447 aa27.37■■□□□ 1.97
KRTCAP3-201ENST00000288873 TOM1O60784 492 aa27.36■■□□□ 1.97
KRTCAP3-201ENST00000288873 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.36■■□□□ 1.97
KRTCAP3-201ENST00000288873 ATF3P18847 181 aa27.31■■□□□ 1.96
KRTCAP3-201ENST00000288873 CENPJQ9HC77 1338 aaPredicted RBP27.29■■□□□ 1.96
KRTCAP3-201ENST00000288873 EIF3AQ14152 1382 aaKnown RBP27.29■■□□□ 1.96
KRTCAP3-201ENST00000288873 DCCP43146 1447 aa27.29■■□□□ 1.96
KRTCAP3-201ENST00000288873 MINK1Q8N4C8 1332 aaPredicted RBP27.28■■□□□ 1.96
KRTCAP3-201ENST00000288873 CADPS2Q86UW7 1296 aa27.28■■□□□ 1.96
KRTCAP3-201ENST00000288873 SOCS7O14512 581 aa27.27■■□□□ 1.96
KRTCAP3-201ENST00000288873 PIP4K2BP78356 416 aa27.27■■□□□ 1.96
KRTCAP3-201ENST00000288873 SCAF1Q9H7N4 1312 aaKnown RBP27.26■■□□□ 1.95
KRTCAP3-201ENST00000288873 QRICH2Q9H0J4 1663 aa27.25■■□□□ 1.95
KRTCAP3-201ENST00000288873 HSPA1LP34931 641 aa27.25■■□□□ 1.95
KRTCAP3-201ENST00000288873 HIRIP3Q9BW71 556 aaPredicted RBP27.25■■□□□ 1.95
KRTCAP3-201ENST00000288873 CDC42BPGQ6DT37 1551 aa27.25■■□□□ 1.95
KRTCAP3-201ENST00000288873 ADGRB2O60241 1585 aa27.22■■□□□ 1.95
KRTCAP3-201ENST00000288873 SLAIN2Q9P270 581 aa27.22■■□□□ 1.95
KRTCAP3-201ENST00000288873 USP47Q96K76 1375 aa27.21■■□□□ 1.95
KRTCAP3-201ENST00000288873 MST1RQ04912 1400 aa27.19■■□□□ 1.94
KRTCAP3-201ENST00000288873 FMN2Q9NZ56 1722 aa27.19■■□□□ 1.94
KRTCAP3-201ENST00000288873 WASLO00401 505 aaPredicted RBP27.17■■□□□ 1.94
KRTCAP3-201ENST00000288873 ST20-MTHFSA0A0A6YYL1 179 aa27.16■■□□□ 1.94
KRTCAP3-201ENST00000288873 NUTM2FA1L443 756 aa27.16■■□□□ 1.94
KRTCAP3-201ENST00000288873 C1orf167Q5SNV9 1468 aa27.14■■□□□ 1.94
KRTCAP3-201ENST00000288873 CDK19Q9BWU1 502 aa27.13■■□□□ 1.93
KRTCAP3-201ENST00000288873 ROBO1Q9Y6N7 1651 aa27.11■■□□□ 1.93
KRTCAP3-201ENST00000288873 SBNO2Q9Y2G9 1366 aa27.11■■□□□ 1.93
KRTCAP3-201ENST00000288873 MED1Q15648 1581 aaPredicted RBP27.11■■□□□ 1.93
KRTCAP3-201ENST00000288873 EIF4G2P78344 907 aaKnown RBP eCLIP27.1■■□□□ 1.93
KRTCAP3-201ENST00000288873 TULP4Q9NRJ4 1543 aa27.1■■□□□ 1.93
KRTCAP3-201ENST00000288873 ZEB1P37275 1124 aaPredicted RBP27.09■■□□□ 1.93
KRTCAP3-201ENST00000288873 EVC2Q86UK5 1308 aa27.09■■□□□ 1.93
KRTCAP3-201ENST00000288873 RGPD8O14715 1765 aaPredicted RBP27.09■■□□□ 1.93
KRTCAP3-201ENST00000288873 SRPK2P78362 688 aaKnown RBP27.08■■□□□ 1.93
KRTCAP3-201ENST00000288873 BRINP3Q76B58 766 aa27.08■■□□□ 1.93
KRTCAP3-201ENST00000288873 TESK2Q96S53 571 aa27.08■■□□□ 1.93
KRTCAP3-201ENST00000288873 ORAI2Q96SN7 254 aa27.08■■□□□ 1.93
KRTCAP3-201ENST00000288873 USP32Q8NFA0 1604 aa27.08■■□□□ 1.93
KRTCAP3-201ENST00000288873 ANKARQ7Z5J8 1434 aa27.07■■□□□ 1.92
KRTCAP3-201ENST00000288873 HSPA5P11021 654 aaKnown RBP27.07■■□□□ 1.92
KRTCAP3-201ENST00000288873 ESCO1Q5FWF5 840 aa27.07■■□□□ 1.92
KRTCAP3-201ENST00000288873 CABP2Q9NPB3 220 aa27.06■■□□□ 1.92
KRTCAP3-201ENST00000288873 PRR36Q9H6K5 1346 aa27.06■■□□□ 1.92
KRTCAP3-201ENST00000288873 NUDT16Q96DE0 195 aaKnown RBP27.05■■□□□ 1.92
KRTCAP3-201ENST00000288873 ATP7BP35670 1465 aa27.02■■□□□ 1.92
KRTCAP3-201ENST00000288873 SLC24A1O60721 1099 aa27.02■■□□□ 1.92
KRTCAP3-201ENST00000288873 ITSN1Q15811 1721 aa26.99■■□□□ 1.91
KRTCAP3-201ENST00000288873 TMF1P82094 1093 aa26.99■■□□□ 1.91
KRTCAP3-201ENST00000288873 PHF8Q9UPP1 1060 aa26.99■■□□□ 1.91
KRTCAP3-201ENST00000288873 KIF1AQ12756 1690 aa26.98■■□□□ 1.91
KRTCAP3-201ENST00000288873 PMFBP1Q8TBY8 1022 aa26.97■■□□□ 1.91
KRTCAP3-201ENST00000288873 CCDC61Q9Y6R9 512 aa26.97■■□□□ 1.91
KRTCAP3-201ENST00000288873 TOPAZ1Q8N9V7 1692 aa26.96■■□□□ 1.91
KRTCAP3-201ENST00000288873 DDX17Q92841 729 aaKnown RBP26.96■■□□□ 1.91
KRTCAP3-201ENST00000288873 NHSL1Q5SYE7 1610 aa26.96■■□□□ 1.91
KRTCAP3-201ENST00000288873 AHDC1Q5TGY3 1603 aaPredicted RBP26.95■■□□□ 1.91
KRTCAP3-201ENST00000288873 PHLPP1O60346 1717 aa26.95■■□□□ 1.9
KRTCAP3-201ENST00000288873 FOXO3O43524 673 aa26.94■■□□□ 1.9
KRTCAP3-201ENST00000288873 PPIP5K1Q6PFW1 1433 aa26.93■■□□□ 1.9
KRTCAP3-201ENST00000288873 ATAD2Q6PL18 1390 aa26.93■■□□□ 1.9
KRTCAP3-201ENST00000288873 PUS7Q96PZ0 661 aaKnown RBP26.92■■□□□ 1.9
KRTCAP3-201ENST00000288873 NPHP3Q7Z494 1330 aa26.91■■□□□ 1.9
KRTCAP3-201ENST00000288873 NGDNQ8NEJ9 315 aaKnown RBP26.91■■□□□ 1.9
KRTCAP3-201ENST00000288873 PLEKHG3A1L390 1219 aa26.9■■□□□ 1.9
KRTCAP3-201ENST00000288873 CABP1Q9NZU7 370 aa26.9■■□□□ 1.9
KRTCAP3-201ENST00000288873 CDCA8Q53HL2 280 aa26.89■■□□□ 1.9
KRTCAP3-201ENST00000288873 XPCQ01831 940 aaPredicted RBP26.88■■□□□ 1.89
KRTCAP3-201ENST00000288873 PHF23Q9BUL5 403 aaPredicted RBP26.88■■□□□ 1.89
KRTCAP3-201ENST00000288873 ACEP12821 1306 aa26.88■■□□□ 1.89
KRTCAP3-201ENST00000288873 COL16A1Q07092 1604 aaPredicted RBP26.87■■□□□ 1.89
KRTCAP3-201ENST00000288873 PSME1Q06323 249 aa26.87■■□□□ 1.89
KRTCAP3-201ENST00000288873 KRT28Q7Z3Y7 464 aa26.86■■□□□ 1.89
KRTCAP3-201ENST00000288873 TMC1Q8TDI8 760 aa26.86■■□□□ 1.89
KRTCAP3-201ENST00000288873 PXDNQ92626 1479 aa26.86■■□□□ 1.89
KRTCAP3-201ENST00000288873 SOS2Q07890 1332 aaPredicted RBP26.86■■□□□ 1.89
KRTCAP3-201ENST00000288873 POLR3AO14802 1390 aaPredicted RBP26.84■■□□□ 1.89
KRTCAP3-201ENST00000288873 POLR3GLQ9BT43 218 aa26.82■■□□□ 1.88
KRTCAP3-201ENST00000288873 SLC12A5Q9H2X9 1139 aa26.82■■□□□ 1.88
KRTCAP3-201ENST00000288873 C11orf95C9JLR9 678 aaPredicted RBP26.81■■□□□ 1.88
KRTCAP3-201ENST00000288873 LRRC59Q96AG4 307 aaKnown RBP26.81■■□□□ 1.88
KRTCAP3-201ENST00000288873 NINLQ9Y2I6 1382 aa26.78■■□□□ 1.88
KRTCAP3-201ENST00000288873 AKAP12Q02952 1782 aa26.77■■□□□ 1.88
KRTCAP3-201ENST00000288873 TRPM3Q9HCF6 1732 aaPredicted RBP26.76■■□□□ 1.88
KRTCAP3-201ENST00000288873 ZNF692Q9BU19 519 aaPredicted RBP26.76■■□□□ 1.87
KRTCAP3-201ENST00000288873 CPSF1Q10570 1443 aaKnown RBP26.75■■□□□ 1.87
KRTCAP3-201ENST00000288873 SBNO1A3KN83 1393 aa26.75■■□□□ 1.87
KRTCAP3-201ENST00000288873 JCADQ9P266 1359 aa26.75■■□□□ 1.87
KRTCAP3-201ENST00000288873 SPATA31A3Q5VYP0 1347 aa26.75■■□□□ 1.87
KRTCAP3-201ENST00000288873 TERF2IPQ9NYB0 399 aa26.75■■□□□ 1.87
KRTCAP3-201ENST00000288873 MYOM1P52179 1685 aa26.75■■□□□ 1.87
KRTCAP3-201ENST00000288873 CD163L1Q9NR16 1453 aa26.74■■□□□ 1.87
KRTCAP3-201ENST00000288873 PAK3O75914 559 aaPredicted RBP26.74■■□□□ 1.87
KRTCAP3-201ENST00000288873 HDGFL2Q7Z4V5 671 aaPredicted RBP26.74■■□□□ 1.87
KRTCAP3-201ENST00000288873 USP6P35125 1406 aa26.73■■□□□ 1.87
KRTCAP3-201ENST00000288873 KTN1Q86UP2 1357 aaKnown RBP26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms