RNA–Protein interactions for RNA: ENST00000286428.5

VBP1-201, Transcript of VHL binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VBP1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-201ENST00000286428 C3P01024 1663 aa25.42■■□□□ 1.66
VBP1-201ENST00000286428 PLEKHG1Q9ULL1 1385 aa25.42■■□□□ 1.66
VBP1-201ENST00000286428 NEFLP07196 543 aa25.42■■□□□ 1.66
VBP1-201ENST00000286428 SAFB2Q14151 953 aaKnown RBP eCLIP25.42■■□□□ 1.66
VBP1-201ENST00000286428 CGNL1Q0VF96 1302 aa25.41■■□□□ 1.66
VBP1-201ENST00000286428 SENP3Q9H4L4 574 aaPredicted RBP25.41■■□□□ 1.66
VBP1-201ENST00000286428 TXNDC2Q86VQ3 553 aa25.4■■□□□ 1.66
VBP1-201ENST00000286428 CABP2Q9NPB3 220 aa25.4■■□□□ 1.66
VBP1-201ENST00000286428 FAM135BQ49AJ0 1406 aa25.4■■□□□ 1.66
VBP1-201ENST00000286428 MINK1Q8N4C8 1332 aaPredicted RBP25.39■■□□□ 1.66
VBP1-201ENST00000286428 TERF2IPQ9NYB0 399 aa25.39■■□□□ 1.66
VBP1-201ENST00000286428 NSD2O96028 1365 aa25.39■■□□□ 1.65
VBP1-201ENST00000286428 NSD3Q9BZ95 1437 aa25.38■■□□□ 1.65
VBP1-201ENST00000286428 TECPR2O15040 1411 aa25.37■■□□□ 1.65
VBP1-201ENST00000286428 SETD1AO15047 1707 aaKnown RBP25.37■■□□□ 1.65
VBP1-201ENST00000286428 SLIT1O75093 1534 aa25.37■■□□□ 1.65
VBP1-201ENST00000286428 NRXN3Q9Y4C0 1643 aa25.37■■□□□ 1.65
VBP1-201ENST00000286428 CDK19Q9BWU1 502 aa25.36■■□□□ 1.65
VBP1-201ENST00000286428 METP08581 1390 aa25.35■■□□□ 1.65
VBP1-201ENST00000286428 WDR43Q15061 677 aaKnown RBP eCLIP25.35■■□□□ 1.65
VBP1-201ENST00000286428 ARHGAP23Q9P227 1491 aa25.35■■□□□ 1.65
VBP1-201ENST00000286428 MORC1Q86VD1 984 aa25.34■■□□□ 1.65
VBP1-201ENST00000286428 USP32Q8NFA0 1604 aa25.34■■□□□ 1.65
VBP1-201ENST00000286428 HDGFL2Q7Z4V5 671 aaPredicted RBP25.33■■□□□ 1.65
VBP1-201ENST00000286428 LTKP29376 864 aa25.32■■□□□ 1.64
VBP1-201ENST00000286428 TBX22Q9Y458 520 aa25.31■■□□□ 1.64
VBP1-201ENST00000286428 PLPPR3Q6T4P5 718 aa25.3■■□□□ 1.64
VBP1-201ENST00000286428 WAPLQ7Z5K2 1190 aa25.3■■□□□ 1.64
VBP1-201ENST00000286428 ADAMTS13Q76LX8 1427 aa25.3■■□□□ 1.64
VBP1-201ENST00000286428 KNDC1Q76NI1 1749 aa25.3■■□□□ 1.64
VBP1-201ENST00000286428 PDE3BQ13370 1112 aa25.29■■□□□ 1.64
VBP1-201ENST00000286428 WASLO00401 505 aaPredicted RBP25.28■■□□□ 1.64
VBP1-201ENST00000286428 CPS1P31327 1500 aa25.27■■□□□ 1.64
VBP1-201ENST00000286428 SUPT16HQ9Y5B9 1047 aaKnown RBP25.26■■□□□ 1.63
VBP1-201ENST00000286428 BLMP54132 1417 aaPredicted RBP25.26■■□□□ 1.63
VBP1-201ENST00000286428 SMG6Q86US8 1419 aaKnown RBP25.26■■□□□ 1.63
VBP1-201ENST00000286428 A0A1W2PP64 1363 aa25.25■■□□□ 1.63
VBP1-201ENST00000286428 POLR3AO14802 1390 aaPredicted RBP25.25■■□□□ 1.63
VBP1-201ENST00000286428 MED14O60244 1454 aa25.25■■□□□ 1.63
VBP1-201ENST00000286428 NUDCQ9Y266 331 aa25.24■■□□□ 1.63
VBP1-201ENST00000286428 PLEKHH1Q9ULM0 1364 aa25.24■■□□□ 1.63
VBP1-201ENST00000286428 DIP2AQ14689 1571 aa25.23■■□□□ 1.63
VBP1-201ENST00000286428 CFAP53Q96M91 514 aa25.23■■□□□ 1.63
VBP1-201ENST00000286428 CABP1Q9NZU7 370 aa25.22■■□□□ 1.63
VBP1-201ENST00000286428 ADAMTS8Q9UP79 889 aa25.22■■□□□ 1.63
VBP1-201ENST00000286428 ATP7BP35670 1465 aa25.21■■□□□ 1.63
VBP1-201ENST00000286428 FKBP8Q14318 412 aa25.21■■□□□ 1.63
VBP1-201ENST00000286428 RIMS1Q86UR5 1692 aaKnown RBP25.2■■□□□ 1.63
VBP1-201ENST00000286428 ERICH6BQ5W0A0 696 aa25.2■■□□□ 1.63
VBP1-201ENST00000286428 NGEFQ8N5V2 710 aa25.2■■□□□ 1.63
VBP1-201ENST00000286428 CEP170BQ9Y4F5 1589 aaPredicted RBP25.2■■□□□ 1.63
VBP1-201ENST00000286428 ADAMTSL3P82987 1691 aa25.2■■□□□ 1.62
VBP1-201ENST00000286428 PIK3R4Q99570 1358 aa25.19■■□□□ 1.62
VBP1-201ENST00000286428 PELP1Q8IZL8 1130 aaKnown RBP25.19■■□□□ 1.62
VBP1-201ENST00000286428 CCDC61Q9Y6R9 512 aa25.19■■□□□ 1.62
VBP1-201ENST00000286428 ANKLE2Q86XL3 938 aa25.18■■□□□ 1.62
VBP1-201ENST00000286428 SLC26A8Q96RN1 970 aa25.18■■□□□ 1.62
VBP1-201ENST00000286428 ZNF692Q9BU19 519 aaPredicted RBP25.16■■□□□ 1.62
VBP1-201ENST00000286428 AMOTL2Q9Y2J4 779 aa25.16■■□□□ 1.62
VBP1-201ENST00000286428 ROBO2Q9HCK4 1378 aa25.16■■□□□ 1.62
VBP1-201ENST00000286428 NUDT16Q96DE0 195 aaKnown RBP25.15■■□□□ 1.62
VBP1-201ENST00000286428 CD163L1Q9NR16 1453 aa25.15■■□□□ 1.62
VBP1-201ENST00000286428 PTCH1Q13635 1447 aa25.14■■□□□ 1.61
VBP1-201ENST00000286428 FYB1O15117 783 aa25.12■■□□□ 1.61
VBP1-201ENST00000286428 PPIP5K1Q6PFW1 1433 aa25.12■■□□□ 1.61
VBP1-201ENST00000286428 MTHFSP49914 203 aa25.11■■□□□ 1.61
VBP1-201ENST00000286428 ADGRB2O60241 1585 aa25.1■■□□□ 1.61
VBP1-201ENST00000286428 SETD1BQ9UPS6 1966 aaKnown RBP25.1■■□□□ 1.61
VBP1-201ENST00000286428 TNNT2P45379 298 aaPredicted RBP25.1■■□□□ 1.61
VBP1-201ENST00000286428 CPSF1Q10570 1443 aaKnown RBP25.09■■□□□ 1.61
VBP1-201ENST00000286428 ZNF142P52746 1687 aaPredicted RBP25.09■■□□□ 1.61
VBP1-201ENST00000286428 EDC4Q6P2E9 1401 aaKnown RBP25.08■■□□□ 1.61
VBP1-201ENST00000286428 PTPRUQ92729 1446 aa25.08■■□□□ 1.61
VBP1-201ENST00000286428 GGNBP2Q9H3C7 697 aa25.07■■□□□ 1.6
VBP1-201ENST00000286428 SALL2Q9Y467 1007 aaPredicted RBP25.06■■□□□ 1.6
VBP1-201ENST00000286428 PLEKHG3A1L390 1219 aa25.03■■□□□ 1.6
VBP1-201ENST00000286428 CDC42BPGQ6DT37 1551 aa25.02■■□□□ 1.6
VBP1-201ENST00000286428 ANKRD26Q9UPS8 1709 aa25.01■■□□□ 1.59
VBP1-201ENST00000286428 NCBP3Q53F19 620 aaKnown RBP25.01■■□□□ 1.59
VBP1-201ENST00000286428 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25■■□□□ 1.59
VBP1-201ENST00000286428 RUNDC1Q96C34 613 aa25■■□□□ 1.59
VBP1-201ENST00000286428 PNNQ9H307 717 aaKnown RBP25■■□□□ 1.59
VBP1-201ENST00000286428 GOLGA2Q08379 1002 aa24.99■■□□□ 1.59
VBP1-201ENST00000286428 RNF123Q5XPI4 1314 aa24.98■■□□□ 1.59
VBP1-201ENST00000286428 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.98■■□□□ 1.59
VBP1-201ENST00000286428 SENP3-EIF4A1A0A087X0R7 540 aa24.97■■□□□ 1.59
VBP1-201ENST00000286428 APAF1O14727 1248 aa24.97■■□□□ 1.59
VBP1-201ENST00000286428 COG3Q96JB2 828 aa24.97■■□□□ 1.59
VBP1-201ENST00000286428 PRR36Q9H6K5 1346 aa24.96■■□□□ 1.59
VBP1-201ENST00000286428 CCDC146Q8IYE0 955 aa24.96■■□□□ 1.59
VBP1-201ENST00000286428 XRN1Q8IZH2 1706 aaKnown RBP24.96■■□□□ 1.59
VBP1-201ENST00000286428 KIF20BQ96Q89 1820 aa24.96■■□□□ 1.59
VBP1-201ENST00000286428 RCAN3Q9UKA8 241 aa24.95■■□□□ 1.58
VBP1-201ENST00000286428 ZNF521Q96K83 1311 aa24.95■■□□□ 1.58
VBP1-201ENST00000286428 KCNA6P17658 529 aa24.94■■□□□ 1.58
VBP1-201ENST00000286428 AATKQ6ZMQ8 1374 aa24.93■■□□□ 1.58
VBP1-201ENST00000286428 ANKARQ7Z5J8 1434 aa24.93■■□□□ 1.58
VBP1-201ENST00000286428 PNPLA6Q8IY17 1366 aa24.92■■□□□ 1.58
VBP1-201ENST00000286428 U2AF1L5P0DN76 240 aaPredicted RBP24.92■■□□□ 1.58
VBP1-201ENST00000286428 U2AF1Q01081 240 aaKnown RBP eCLIP24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms