RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 POLA1P09884 1462 aaPredicted RBP19.22■□□□□ 0.67
USP43-201ENST00000285199 CHD1LQ86WJ1 897 aa19.22■□□□□ 0.67
USP43-201ENST00000285199 TBC1D32Q96NH3 1257 aa19.22■□□□□ 0.67
USP43-201ENST00000285199 PTPRGP23470 1445 aa19.21■□□□□ 0.67
USP43-201ENST00000285199 RLBP1P12271 317 aa19.21■□□□□ 0.67
USP43-201ENST00000285199 CCDC173Q0VFZ6 552 aa19.21■□□□□ 0.67
USP43-201ENST00000285199 INTS3Q68E01 1043 aaKnown RBP19.21■□□□□ 0.67
USP43-201ENST00000285199 RBM42Q9BTD8 480 aaKnown RBP19.21■□□□□ 0.67
USP43-201ENST00000285199 HAP1P54257 671 aaPredicted RBP19.21■□□□□ 0.67
USP43-201ENST00000285199 C9orf84Q5VXU9 1444 aa19.21■□□□□ 0.67
USP43-201ENST00000285199 UQCRHLA0A096LP55 91 aa19.21■□□□□ 0.67
USP43-201ENST00000285199 UQCRHP07919 91 aa19.21■□□□□ 0.67
USP43-201ENST00000285199 ZNF771Q7L3S4 317 aaPredicted RBP19.21■□□□□ 0.67
USP43-201ENST00000285199 PHF14O94880 888 aa19.2■□□□□ 0.66
USP43-201ENST00000285199 SPC24Q8NBT2 197 aa19.2■□□□□ 0.66
USP43-201ENST00000285199 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.2■□□□□ 0.66
USP43-201ENST00000285199 EHBP1L1Q8N3D4 1523 aa19.2■□□□□ 0.66
USP43-201ENST00000285199 UNC13AQ9UPW8 1703 aa19.2■□□□□ 0.66
USP43-201ENST00000285199 PLEKHH1Q9ULM0 1364 aa19.19■□□□□ 0.66
USP43-201ENST00000285199 SYCE3A1L190 88 aa19.19■□□□□ 0.66
USP43-201ENST00000285199 FOSBP53539 338 aa19.19■□□□□ 0.66
USP43-201ENST00000285199 LRPPRCP42704 1394 aaKnown RBP19.19■□□□□ 0.66
USP43-201ENST00000285199 TPM2P07951 284 aa19.19■□□□□ 0.66
USP43-201ENST00000285199 HSP90B1P14625 803 aaKnown RBP19.18■□□□□ 0.66
USP43-201ENST00000285199 EIF2S2P20042 333 aaKnown RBP19.18■□□□□ 0.66
USP43-201ENST00000285199 DMRT2Q9Y5R5 561 aa19.18■□□□□ 0.66
USP43-201ENST00000285199 EPRSP07814 1512 aaKnown RBP19.18■□□□□ 0.66
USP43-201ENST00000285199 GOLGA6L6A8MZA4 724 aa19.18■□□□□ 0.66
USP43-201ENST00000285199 NPHP1O15259 732 aa19.18■□□□□ 0.66
USP43-201ENST00000285199 FIBPO43427 364 aa19.18■□□□□ 0.66
USP43-201ENST00000285199 ZSCAN30Q86W11 494 aa19.17■□□□□ 0.66
USP43-201ENST00000285199 API5Q9BZZ5 524 aaKnown RBP19.16■□□□□ 0.66
USP43-201ENST00000285199 NRDCO43847 1150 aa19.16■□□□□ 0.66
USP43-201ENST00000285199 RNF123Q5XPI4 1314 aa19.16■□□□□ 0.66
USP43-201ENST00000285199 FKBP5Q13451 457 aaPredicted RBP19.16■□□□□ 0.66
USP43-201ENST00000285199 TRIM27P14373 513 aa19.15■□□□□ 0.66
USP43-201ENST00000285199 CSPP1Q1MSJ5 1256 aa19.15■□□□□ 0.66
USP43-201ENST00000285199 GDPD2Q9HCC8 539 aa19.15■□□□□ 0.66
USP43-201ENST00000285199 MAPK8IP2Q13387 824 aaPredicted RBP19.15■□□□□ 0.66
USP43-201ENST00000285199 RBM27Q9P2N5 1060 aaKnown RBP19.15■□□□□ 0.66
USP43-201ENST00000285199 EFCAB5A4FU69 1503 aa19.15■□□□□ 0.66
USP43-201ENST00000285199 SMARCA5O60264 1052 aaPredicted RBP19.14■□□□□ 0.66
USP43-201ENST00000285199 FBLN1P23142 703 aa19.14■□□□□ 0.66
USP43-201ENST00000285199 IFT57Q9NWB7 429 aa19.14■□□□□ 0.65
USP43-201ENST00000285199 TWISTNBQ3B726 338 aaPredicted RBP19.13■□□□□ 0.65
USP43-201ENST00000285199 UPF3BQ9BZI7 483 aaKnown RBP19.13■□□□□ 0.65
USP43-201ENST00000285199 PER1O15534 1290 aaPredicted RBP19.13■□□□□ 0.65
USP43-201ENST00000285199 SUPT6HQ7KZ85 1726 aaKnown RBP19.13■□□□□ 0.65
USP43-201ENST00000285199 MAP4K4O95819 1239 aaPredicted RBP19.13■□□□□ 0.65
USP43-201ENST00000285199 WDR63Q8IWG1 891 aa19.13■□□□□ 0.65
USP43-201ENST00000285199 NKTRP30414 1462 aaKnown RBP19.12■□□□□ 0.65
USP43-201ENST00000285199 LMOD3Q0VAK6 560 aa19.12■□□□□ 0.65
USP43-201ENST00000285199 LARP6Q9BRS8 491 aaKnown RBP19.12■□□□□ 0.65
USP43-201ENST00000285199 AAMPQ13685 434 aa19.11■□□□□ 0.65
USP43-201ENST00000285199 CCDC39Q9UFE4 941 aa19.11■□□□□ 0.65
USP43-201ENST00000285199 DCTN1Q14203 1278 aa19.11■□□□□ 0.65
USP43-201ENST00000285199 RABEP1Q15276 862 aa19.11■□□□□ 0.65
USP43-201ENST00000285199 TMPOP42166 694 aaKnown RBP19.11■□□□□ 0.65
USP43-201ENST00000285199 AMPHP49418 695 aa19.11■□□□□ 0.65
USP43-201ENST00000285199 ZHX1Q9UKY1 873 aaPredicted RBP19.11■□□□□ 0.65
USP43-201ENST00000285199 VGFO15240 615 aaPredicted RBP19.11■□□□□ 0.65
USP43-201ENST00000285199 CLCN1P35523 988 aa19.11■□□□□ 0.65
USP43-201ENST00000285199 GNAI1P63096 354 aa19.11■□□□□ 0.65
USP43-201ENST00000285199 SMC3Q9UQE7 1217 aa19.11■□□□□ 0.65
USP43-201ENST00000285199 ZNF330Q9Y3S2 320 aaPredicted RBP19.1■□□□□ 0.65
USP43-201ENST00000285199 COG3Q96JB2 828 aa19.1■□□□□ 0.65
USP43-201ENST00000285199 TOPBP1Q92547 1522 aa19.1■□□□□ 0.65
USP43-201ENST00000285199 ROCK1Q13464 1354 aa19.09■□□□□ 0.65
USP43-201ENST00000285199 BECN2A8MW95 431 aa19.09■□□□□ 0.65
USP43-201ENST00000285199 TULP1O00294 542 aaPredicted RBP19.09■□□□□ 0.65
USP43-201ENST00000285199 CCAR2Q8N163 923 aaKnown RBP19.09■□□□□ 0.65
USP43-201ENST00000285199 BICD2Q8TD16 824 aa19.09■□□□□ 0.65
USP43-201ENST00000285199 DIAPH3Q9NSV4 1193 aa19.09■□□□□ 0.65
USP43-201ENST00000285199 TNNT3P45378 269 aaPredicted RBP19.08■□□□□ 0.65
USP43-201ENST00000285199 DDX54Q8TDD1 881 aaKnown RBP19.08■□□□□ 0.65
USP43-201ENST00000285199 TSPY26PQ9H489 355 aa19.08■□□□□ 0.65
USP43-201ENST00000285199 TROQ12816 1431 aaPredicted RBP19.08■□□□□ 0.65
USP43-201ENST00000285199 GOLGA6L19H0YKK7 550 aa19.07■□□□□ 0.64
USP43-201ENST00000285199 CBX1P83916 185 aa19.07■□□□□ 0.64
USP43-201ENST00000285199 GNL2Q13823 731 aaKnown RBP19.06■□□□□ 0.64
USP43-201ENST00000285199 TSHZ3Q63HK5 1081 aa19.06■□□□□ 0.64
USP43-201ENST00000285199 CREBRFQ8IUR6 639 aa19.06■□□□□ 0.64
USP43-201ENST00000285199 GCC1Q96CN9 775 aa19.06■□□□□ 0.64
USP43-201ENST00000285199 CC2D2AQ9P2K1 1620 aa19.06■□□□□ 0.64
USP43-201ENST00000285199 H3BQV1 296 aa19.06■□□□□ 0.64
USP43-201ENST00000285199 IFFO2Q5TF58 517 aa19.06■□□□□ 0.64
USP43-201ENST00000285199 ZNF830Q96NB3 372 aaPredicted RBP19.06■□□□□ 0.64
USP43-201ENST00000285199 TESK2Q96S53 571 aa19.06■□□□□ 0.64
USP43-201ENST00000285199 MIS18AQ9NYP9 233 aa19.06■□□□□ 0.64
USP43-201ENST00000285199 HMGXB3Q12766 1538 aa19.05■□□□□ 0.64
USP43-201ENST00000285199 EXOC6BQ9Y2D4 811 aa19.05■□□□□ 0.64
USP43-201ENST00000285199 TBC1D9Q6ZT07 1266 aa19.05■□□□□ 0.64
USP43-201ENST00000285199 KDM2BQ8NHM5 1336 aa19.05■□□□□ 0.64
USP43-201ENST00000285199 PARD3Q8TEW0 1356 aa19.05■□□□□ 0.64
USP43-201ENST00000285199 NSD3Q9BZ95 1437 aa19.04■□□□□ 0.64
USP43-201ENST00000285199 BAG4O95429 457 aaKnown RBP19.04■□□□□ 0.64
USP43-201ENST00000285199 NGDNQ8NEJ9 315 aaKnown RBP19.04■□□□□ 0.64
USP43-201ENST00000285199 CABP1Q9NZU7 370 aa19.04■□□□□ 0.64
USP43-201ENST00000285199 TSPYL4Q9UJ04 414 aa19.04■□□□□ 0.64
USP43-201ENST00000285199 CIZ1Q9ULV3 898 aaPredicted RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms