RNA–Protein interactions for RNA: ENST00000274065.8

RPS3A-201, Transcript of ribosomal protein S3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS3A, Length 934 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-201ENST00000274065 SLC52A1Q9NWF4 448 aa13.25□□□□□ -0.29
RPS3A-201ENST00000274065 CHD2O14647 1828 aaKnown RBP13.25□□□□□ -0.29
RPS3A-201ENST00000274065 ATF3P18847 181 aa13.24□□□□□ -0.29
RPS3A-201ENST00000274065 C19orf44Q9H6X5 657 aa13.24□□□□□ -0.29
RPS3A-201ENST00000274065 RIMS2Q9UQ26 1411 aa13.23□□□□□ -0.29
RPS3A-201ENST00000274065 PPP1R15AO75807 674 aaPredicted RBP13.23□□□□□ -0.29
RPS3A-201ENST00000274065 RASEFQ8IZ41 740 aa13.23□□□□□ -0.29
RPS3A-201ENST00000274065 MS4A3Q96HJ5 214 aa13.23□□□□□ -0.29
RPS3A-201ENST00000274065 ZBTB47Q9UFB7 747 aaPredicted RBP13.23□□□□□ -0.29
RPS3A-201ENST00000274065 TBX22Q9Y458 520 aa13.23□□□□□ -0.29
RPS3A-201ENST00000274065 NUTM2DQ5VT03 806 aaPredicted RBP13.22□□□□□ -0.29
RPS3A-201ENST00000274065 QTRT2Q9H974 415 aaKnown RBP13.22□□□□□ -0.29
RPS3A-201ENST00000274065 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.22□□□□□ -0.29
RPS3A-201ENST00000274065 RBM6P78332 1123 aaKnown RBP13.21□□□□□ -0.29
RPS3A-201ENST00000274065 C8orf37Q96NL8 207 aa13.21□□□□□ -0.29
RPS3A-201ENST00000274065 ADAMTS13Q76LX8 1427 aa13.21□□□□□ -0.3
RPS3A-201ENST00000274065 KIF12Q96FN5 646 aa13.19□□□□□ -0.3
RPS3A-201ENST00000274065 CHIC2Q9UKJ5 165 aa13.19□□□□□ -0.3
RPS3A-201ENST00000274065 DAPK1P53355 1430 aa13.19□□□□□ -0.3
RPS3A-201ENST00000274065 SETD5Q9C0A6 1442 aa13.19□□□□□ -0.3
RPS3A-201ENST00000274065 ASXL1Q8IXJ9 1541 aa13.18□□□□□ -0.3
RPS3A-201ENST00000274065 CROCC2H7BZ55 1655 aa13.18□□□□□ -0.3
RPS3A-201ENST00000274065 EP400Q96L91 3159 aa13.17□□□□□ -0.3
RPS3A-201ENST00000274065 HDGFP51858 240 aaKnown RBP13.17□□□□□ -0.3
RPS3A-201ENST00000274065 DDX17Q92841 729 aaKnown RBP13.17□□□□□ -0.3
RPS3A-201ENST00000274065 FBXO3Q9UK99 471 aa13.17□□□□□ -0.3
RPS3A-201ENST00000274065 SETBP1Q9Y6X0 1596 aa13.16□□□□□ -0.3
RPS3A-201ENST00000274065 VPS8Q8N3P4 1428 aa13.16□□□□□ -0.3
RPS3A-201ENST00000274065 PTPRUQ92729 1446 aa13.16□□□□□ -0.3
RPS3A-201ENST00000274065 NUBP1P53384 320 aa13.16□□□□□ -0.3
RPS3A-201ENST00000274065 ASTLQ6HA08 431 aaPredicted RBP13.16□□□□□ -0.3
RPS3A-201ENST00000274065 AMOTL2Q9Y2J4 779 aa13.16□□□□□ -0.3
RPS3A-201ENST00000274065 PIK3R4Q99570 1358 aa13.16□□□□□ -0.3
RPS3A-201ENST00000274065 MYO5BQ9ULV0 1848 aa13.16□□□□□ -0.3
RPS3A-201ENST00000274065 TMEM131LA2VDJ0 1609 aa13.15□□□□□ -0.3
RPS3A-201ENST00000274065 CHGAP10645 457 aaKnown RBP13.15□□□□□ -0.3
RPS3A-201ENST00000274065 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.15□□□□□ -0.3
RPS3A-201ENST00000274065 LRRC59Q96AG4 307 aaKnown RBP13.15□□□□□ -0.3
RPS3A-201ENST00000274065 ATAD2Q6PL18 1390 aa13.15□□□□□ -0.3
RPS3A-201ENST00000274065 PNPLA6Q8IY17 1366 aa13.15□□□□□ -0.3
RPS3A-201ENST00000274065 ANKRD30AQ9BXX3 1397 aa13.15□□□□□ -0.3
RPS3A-201ENST00000274065 MST1RQ04912 1400 aa13.14□□□□□ -0.31
RPS3A-201ENST00000274065 ADAMTS2O95450 1211 aa13.14□□□□□ -0.31
RPS3A-201ENST00000274065 RPRD2Q5VT52 1461 aaKnown RBP13.14□□□□□ -0.31
RPS3A-201ENST00000274065 GCC2Q8IWJ2 1684 aa13.14□□□□□ -0.31
RPS3A-201ENST00000274065 DCCP43146 1447 aa13.13□□□□□ -0.31
RPS3A-201ENST00000274065 PTPN23Q9H3S7 1636 aa13.13□□□□□ -0.31
RPS3A-201ENST00000274065 PELP1Q8IZL8 1130 aaKnown RBP13.13□□□□□ -0.31
RPS3A-201ENST00000274065 NGLY1Q96IV0 654 aa13.13□□□□□ -0.31
RPS3A-201ENST00000274065 ATMINO43313 823 aaPredicted RBP13.12□□□□□ -0.31
RPS3A-201ENST00000274065 NHSL1Q5SYE7 1610 aa13.12□□□□□ -0.31
RPS3A-201ENST00000274065 TRPM2O94759 1503 aa13.1□□□□□ -0.31
RPS3A-201ENST00000274065 MAP3K13O43283 966 aa13.09□□□□□ -0.31
RPS3A-201ENST00000274065 USP21Q9UK80 565 aa13.09□□□□□ -0.31
RPS3A-201ENST00000274065 TRPC5Q9UL62 973 aaPredicted RBP13.07□□□□□ -0.32
RPS3A-201ENST00000274065 ANKRD50Q9ULJ7 1429 aa13.06□□□□□ -0.32
RPS3A-201ENST00000274065 ADGRL2O95490 1459 aa13.06□□□□□ -0.32
RPS3A-201ENST00000274065 FNBP4Q8N3X1 1017 aaPredicted RBP13.06□□□□□ -0.32
RPS3A-201ENST00000274065 UNC13BO14795 1591 aa13.06□□□□□ -0.32
RPS3A-201ENST00000274065 ATRNO75882 1429 aa13.05□□□□□ -0.32
RPS3A-201ENST00000274065 XRN1Q8IZH2 1706 aaKnown RBP13.05□□□□□ -0.32
RPS3A-201ENST00000274065 METP08581 1390 aa13.05□□□□□ -0.32
RPS3A-201ENST00000274065 ADGRL3Q9HAR2 1447 aa13.05□□□□□ -0.32
RPS3A-201ENST00000274065 SLC39A7Q92504 469 aa13.04□□□□□ -0.32
RPS3A-201ENST00000274065 FAM212AQ96EL1 285 aa13.04□□□□□ -0.32
RPS3A-201ENST00000274065 SGIP1Q9BQI5 828 aa13.04□□□□□ -0.32
RPS3A-201ENST00000274065 CCDC125Q86Z20 511 aa13.03□□□□□ -0.32
RPS3A-201ENST00000274065 SOS2Q07890 1332 aaPredicted RBP13.03□□□□□ -0.32
RPS3A-201ENST00000274065 C1orf167Q5SNV9 1468 aa13.03□□□□□ -0.32
RPS3A-201ENST00000274065 NRXN3Q9Y4C0 1643 aa13.02□□□□□ -0.32
RPS3A-201ENST00000274065 POTEB2H3BUK9 544 aa13.02□□□□□ -0.33
RPS3A-201ENST00000274065 C7P10643 843 aa13.02□□□□□ -0.33
RPS3A-201ENST00000274065 ORAI2Q96SN7 254 aa13.02□□□□□ -0.33
RPS3A-201ENST00000274065 METRNQ9UJH8 293 aa13.02□□□□□ -0.33
RPS3A-201ENST00000274065 PTCH1Q13635 1447 aa13.02□□□□□ -0.33
RPS3A-201ENST00000274065 TIE1P35590 1138 aa13.01□□□□□ -0.33
RPS3A-201ENST00000274065 ATN1P54259 1190 aaPredicted RBP13.01□□□□□ -0.33
RPS3A-201ENST00000274065 BMP2KQ9NSY1 1161 aaPredicted RBP13.01□□□□□ -0.33
RPS3A-201ENST00000274065 TRPC6Q9Y210 931 aa13.01□□□□□ -0.33
RPS3A-201ENST00000274065 E9PCH4 1651 aa13□□□□□ -0.33
RPS3A-201ENST00000274065 BCL9LQ86UU0 1499 aa13□□□□□ -0.33
RPS3A-201ENST00000274065 LOC105371045A0A1W2PR82 267 aa13□□□□□ -0.33
RPS3A-201ENST00000274065 VASPP50552 380 aaPredicted RBP13□□□□□ -0.33
RPS3A-201ENST00000274065 NALCNQ8IZF0 1738 aa12.99□□□□□ -0.33
RPS3A-201ENST00000274065 DEFB132Q7Z7B7 95 aa12.99□□□□□ -0.33
RPS3A-201ENST00000274065 FAM50AQ14320 339 aaKnown RBP12.98□□□□□ -0.33
RPS3A-201ENST00000274065 LAMC1P11047 1609 aa12.98□□□□□ -0.33
RPS3A-201ENST00000274065 GJD4Q96KN9 370 aaPredicted RBP12.97□□□□□ -0.33
RPS3A-201ENST00000274065 MYOM2P54296 1465 aa12.97□□□□□ -0.33
RPS3A-201ENST00000274065 BLMP54132 1417 aaPredicted RBP12.96□□□□□ -0.33
RPS3A-201ENST00000274065 OTUD5Q96G74 571 aa12.96□□□□□ -0.33
RPS3A-201ENST00000274065 PCDHB13Q9Y5F0 798 aa12.96□□□□□ -0.33
RPS3A-201ENST00000274065 ZNF326Q5BKZ1 582 aaKnown RBP12.95□□□□□ -0.34
RPS3A-201ENST00000274065 COL22A1Q8NFW1 1626 aaPredicted RBP12.94□□□□□ -0.34
RPS3A-201ENST00000274065 ROBO2Q9HCK4 1378 aa12.94□□□□□ -0.34
RPS3A-201ENST00000274065 LRP5O75197 1615 aa12.93□□□□□ -0.34
RPS3A-201ENST00000274065 TTLL13PA6NNM8 815 aa12.93□□□□□ -0.34
RPS3A-201ENST00000274065 NUP155O75694 1391 aa12.93□□□□□ -0.34
RPS3A-201ENST00000274065 RALGAPBQ86X10 1494 aa12.92□□□□□ -0.34
RPS3A-201ENST00000274065 IQGAP3Q86VI3 1631 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms