RNA–Protein interactions for RNA: ENST00000264637.8

THRA-201, Transcript of thyroid hormone receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene THRA, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THRA-201ENST00000264637 RUNDC1Q96C34 613 aa29.27■■■□□ 2.28
THRA-201ENST00000264637 KIF1BO60333 1816 aa29.27■■■□□ 2.28
THRA-201ENST00000264637 NOS1P29475 1434 aa29.26■■■□□ 2.28
THRA-201ENST00000264637 PCDHB15Q9Y5E8 787 aa29.26■■■□□ 2.27
THRA-201ENST00000264637 SHPRHQ149N8 1683 aa29.26■■■□□ 2.27
THRA-201ENST00000264637 MAPK8IP3Q9UPT6 1336 aa29.26■■■□□ 2.27
THRA-201ENST00000264637 VIRMAQ69YN4 1812 aaKnown RBP29.26■■■□□ 2.27
THRA-201ENST00000264637 NINLQ9Y2I6 1382 aa29.25■■■□□ 2.27
THRA-201ENST00000264637 TMEM132EQ6IEE7 984 aa29.24■■■□□ 2.27
THRA-201ENST00000264637 SBNO2Q9Y2G9 1366 aa29.23■■■□□ 2.27
THRA-201ENST00000264637 IFT172Q9UG01 1749 aa29.23■■■□□ 2.27
THRA-201ENST00000264637 ADGRL1O94910 1474 aa29.23■■■□□ 2.27
THRA-201ENST00000264637 NRXN1Q9ULB1 1477 aa29.22■■■□□ 2.27
THRA-201ENST00000264637 MTHFSP49914 203 aa29.22■■■□□ 2.27
THRA-201ENST00000264637 MYO3AQ8NEV4 1616 aa29.21■■■□□ 2.27
THRA-201ENST00000264637 EFCAB6Q5THR3 1501 aa29.21■■■□□ 2.27
THRA-201ENST00000264637 PHF23Q9BUL5 403 aaPredicted RBP29.2■■■□□ 2.27
THRA-201ENST00000264637 ABCA9Q8IUA7 1624 aa29.2■■■□□ 2.26
THRA-201ENST00000264637 PPRC1Q5VV67 1664 aaKnown RBP29.19■■■□□ 2.26
THRA-201ENST00000264637 IQSEC2Q5JU85 1478 aa29.19■■■□□ 2.26
THRA-201ENST00000264637 SLKQ9H2G2 1235 aaPredicted RBP29.19■■■□□ 2.26
THRA-201ENST00000264637 NLRP1Q9C000 1473 aa29.18■■■□□ 2.26
THRA-201ENST00000264637 PMFBP1Q8TBY8 1022 aa29.16■■■□□ 2.26
THRA-201ENST00000264637 PDZRN3Q9UPQ7 1066 aa29.16■■■□□ 2.26
THRA-201ENST00000264637 WDR63Q8IWG1 891 aa29.15■■■□□ 2.26
THRA-201ENST00000264637 CFAP65Q6ZU64 1925 aaKnown RBP29.14■■■□□ 2.26
THRA-201ENST00000264637 C14orf93Q9H972 538 aaKnown RBP29.14■■■□□ 2.25
THRA-201ENST00000264637 BECN1Q14457 450 aa29.12■■■□□ 2.25
THRA-201ENST00000264637 ADGRB3O60242 1522 aa29.11■■■□□ 2.25
THRA-201ENST00000264637 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.11■■■□□ 2.25
THRA-201ENST00000264637 ZNF518AQ6AHZ1 1483 aa29.11■■■□□ 2.25
THRA-201ENST00000264637 QRICH2Q9H0J4 1663 aa29.11■■■□□ 2.25
THRA-201ENST00000264637 POGKQ9P215 609 aa29.11■■■□□ 2.25
THRA-201ENST00000264637 NUTM2DQ5VT03 806 aaPredicted RBP29.1■■■□□ 2.25
THRA-201ENST00000264637 SETBP1Q9Y6X0 1596 aa29.1■■■□□ 2.25
THRA-201ENST00000264637 U2AF1L5P0DN76 240 aaPredicted RBP29.09■■■□□ 2.25
THRA-201ENST00000264637 U2AF1Q01081 240 aaKnown RBP eCLIP29.09■■■□□ 2.25
THRA-201ENST00000264637 KIDINS220Q9ULH0 1771 aa29.08■■■□□ 2.25
THRA-201ENST00000264637 CFAP53Q96M91 514 aa29.08■■■□□ 2.24
THRA-201ENST00000264637 ADGRB1O14514 1584 aa29.07■■■□□ 2.24
THRA-201ENST00000264637 ZC3H13Q5T200 1668 aaKnown RBP29.07■■■□□ 2.24
THRA-201ENST00000264637 CCDC27Q2M243 656 aa29.07■■■□□ 2.24
THRA-201ENST00000264637 GGT6Q6P531 493 aa29.06■■■□□ 2.24
THRA-201ENST00000264637 TBC1D32Q96NH3 1257 aa29.06■■■□□ 2.24
THRA-201ENST00000264637 TSR2Q969E8 191 aaKnown RBP29.05■■■□□ 2.24
THRA-201ENST00000264637 RWDD1Q9H446 243 aaPredicted RBP29.05■■■□□ 2.24
THRA-201ENST00000264637 NPATQ14207 1427 aa29.05■■■□□ 2.24
THRA-201ENST00000264637 ANTXR1Q9H6X2 564 aa29.04■■■□□ 2.24
THRA-201ENST00000264637 AAMPQ13685 434 aa29.04■■■□□ 2.24
THRA-201ENST00000264637 MYH16Q9H6N6 1097 aa29.03■■■□□ 2.24
THRA-201ENST00000264637 MVPQ14764 893 aaKnown RBP29.03■■■□□ 2.24
THRA-201ENST00000264637 TBC1D2Q9BYX2 928 aa29.03■■■□□ 2.24
THRA-201ENST00000264637 UPF2Q9HAU5 1272 aaKnown RBP29.03■■■□□ 2.24
THRA-201ENST00000264637 LMTK2Q8IWU2 1503 aa29.02■■■□□ 2.24
THRA-201ENST00000264637 SENP3Q9H4L4 574 aaPredicted RBP29.02■■■□□ 2.24
THRA-201ENST00000264637 PPLO60437 1756 aa29.01■■■□□ 2.24
THRA-201ENST00000264637 CABP2Q9NPB3 220 aa29.01■■■□□ 2.23
THRA-201ENST00000264637 SAFB2Q14151 953 aaKnown RBP eCLIP29■■■□□ 2.23
THRA-201ENST00000264637 SPRYD3Q8NCJ5 442 aa28.99■■■□□ 2.23
THRA-201ENST00000264637 ZKSCAN2Q63HK3 967 aa28.99■■■□□ 2.23
THRA-201ENST00000264637 FTSJ3Q8IY81 847 aaKnown RBP28.99■■■□□ 2.23
THRA-201ENST00000264637 DZIP1LQ8IYY4 767 aaKnown RBP28.98■■■□□ 2.23
THRA-201ENST00000264637 USP32Q8NFA0 1604 aa28.97■■■□□ 2.23
THRA-201ENST00000264637 ASXL2Q76L83 1435 aa28.97■■■□□ 2.23
THRA-201ENST00000264637 EVC2Q86UK5 1308 aa28.96■■■□□ 2.23
THRA-201ENST00000264637 EXOSC9Q06265 439 aaKnown RBP28.95■■■□□ 2.23
THRA-201ENST00000264637 ANKRD36BQ8N2N9 1353 aa28.95■■■□□ 2.23
THRA-201ENST00000264637 TULP4Q9NRJ4 1543 aa28.94■■■□□ 2.22
THRA-201ENST00000264637 U2SURPO15042 1029 aaKnown RBP28.94■■■□□ 2.22
THRA-201ENST00000264637 SMC4Q9NTJ3 1288 aa28.94■■■□□ 2.22
THRA-201ENST00000264637 ZMYM3Q14202 1370 aa28.93■■■□□ 2.22
THRA-201ENST00000264637 TRIM27P14373 513 aa28.92■■■□□ 2.22
THRA-201ENST00000264637 SSH1Q8WYL5 1049 aa28.91■■■□□ 2.22
THRA-201ENST00000264637 GGNBP2Q9H3C7 697 aa28.91■■■□□ 2.22
THRA-201ENST00000264637 GLI2P10070 1586 aa28.91■■■□□ 2.22
THRA-201ENST00000264637 CD109Q6YHK3 1445 aa28.91■■■□□ 2.22
THRA-201ENST00000264637 PLEKHF1Q96S99 279 aa28.9■■■□□ 2.22
THRA-201ENST00000264637 TRIM35Q9UPQ4 493 aa28.9■■■□□ 2.22
THRA-201ENST00000264637 RPGRIP1LQ68CZ1 1315 aa28.9■■■□□ 2.22
THRA-201ENST00000264637 ADGRB2O60241 1585 aa28.9■■■□□ 2.22
THRA-201ENST00000264637 MFAP1P55081 439 aaKnown RBP28.89■■■□□ 2.22
THRA-201ENST00000264637 ITPRIPQ8IWB1 547 aa28.89■■■□□ 2.22
THRA-201ENST00000264637 TMPOP42166 694 aaKnown RBP28.89■■■□□ 2.22
THRA-201ENST00000264637 FRMPD1Q5SYB0 1578 aa28.88■■■□□ 2.21
THRA-201ENST00000264637 NSD2O96028 1365 aa28.87■■■□□ 2.21
THRA-201ENST00000264637 STK26Q9P289 416 aa28.87■■■□□ 2.21
THRA-201ENST00000264637 A0A1W2PP64 1363 aa28.86■■■□□ 2.21
THRA-201ENST00000264637 NCBP3Q53F19 620 aaKnown RBP28.86■■■□□ 2.21
THRA-201ENST00000264637 C22orf23Q9BZE7 217 aa28.86■■■□□ 2.21
THRA-201ENST00000264637 NOB1Q9ULX3 412 aaKnown RBP28.85■■■□□ 2.21
THRA-201ENST00000264637 ARHGEF28Q8N1W1 1705 aaKnown RBP28.85■■■□□ 2.21
THRA-201ENST00000264637 ARXQ96QS3 562 aa28.85■■■□□ 2.21
THRA-201ENST00000264637 ATF7IPQ6VMQ6 1270 aa28.83■■■□□ 2.21
THRA-201ENST00000264637 PUS7Q96PZ0 661 aaKnown RBP28.83■■■□□ 2.21
THRA-201ENST00000264637 SRPK2P78362 688 aaKnown RBP28.83■■■□□ 2.21
THRA-201ENST00000264637 VGFO15240 615 aaPredicted RBP28.82■■■□□ 2.2
THRA-201ENST00000264637 CT47B1P0C2W7 299 aaPredicted RBP28.82■■■□□ 2.2
THRA-201ENST00000264637 HDAC1Q13547 482 aaPredicted RBP28.82■■■□□ 2.2
THRA-201ENST00000264637 UBE2Q2Q8WVN8 375 aa28.82■■■□□ 2.2
THRA-201ENST00000264637 TMEM57Q8N5G2 664 aa28.82■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms