RNA–Protein interactions for RNA: ENST00000264596.3

NEIL3-201, Transcript of nei like DNA glycosylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEIL3, Length 2,408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-201ENST00000264596 ABCC3O15438 1527 aa25.63■■□□□ 1.69
NEIL3-201ENST00000264596 RGS3P49796 1198 aa25.63■■□□□ 1.69
NEIL3-201ENST00000264596 RRP7AQ9Y3A4 280 aaKnown RBP25.63■■□□□ 1.69
NEIL3-201ENST00000264596 SHPRHQ149N8 1683 aa25.63■■□□□ 1.69
NEIL3-201ENST00000264596 RPGRIP1LQ68CZ1 1315 aa25.61■■□□□ 1.69
NEIL3-201ENST00000264596 DDRGK1Q96HY6 314 aa25.61■■□□□ 1.69
NEIL3-201ENST00000264596 FAM161AQ3B820 660 aa25.6■■□□□ 1.69
NEIL3-201ENST00000264596 CANXP27824 592 aaKnown RBP25.59■■□□□ 1.69
NEIL3-201ENST00000264596 RAPGEF3O95398 923 aa25.59■■□□□ 1.69
NEIL3-201ENST00000264596 CAMSAP1Q5T5Y3 1602 aa25.58■■□□□ 1.69
NEIL3-201ENST00000264596 C8orf34Q49A92 452 aa25.58■■□□□ 1.69
NEIL3-201ENST00000264596 RUNDC1Q96C34 613 aa25.58■■□□□ 1.69
NEIL3-201ENST00000264596 MTHFSP49914 203 aa25.57■■□□□ 1.68
NEIL3-201ENST00000264596 SENP3Q9H4L4 574 aaPredicted RBP25.57■■□□□ 1.68
NEIL3-201ENST00000264596 GLI2P10070 1586 aa25.57■■□□□ 1.68
NEIL3-201ENST00000264596 SIGLEC1Q9BZZ2 1709 aa25.57■■□□□ 1.68
NEIL3-201ENST00000264596 CGNL1Q0VF96 1302 aa25.56■■□□□ 1.68
NEIL3-201ENST00000264596 TCP11L2Q8N4U5 519 aa25.56■■□□□ 1.68
NEIL3-201ENST00000264596 NEFMP07197 916 aa25.56■■□□□ 1.68
NEIL3-201ENST00000264596 PANK1Q8TE04 598 aa25.55■■□□□ 1.68
NEIL3-201ENST00000264596 OSCARQ8IYS5 282 aa25.54■■□□□ 1.68
NEIL3-201ENST00000264596 EVC2Q86UK5 1308 aa25.54■■□□□ 1.68
NEIL3-201ENST00000264596 IGHDP01880 384 aa25.54■■□□□ 1.68
NEIL3-201ENST00000264596 SAFB2Q14151 953 aaKnown RBP eCLIP25.54■■□□□ 1.68
NEIL3-201ENST00000264596 FRAT1Q92837 279 aaPredicted RBP25.54■■□□□ 1.68
NEIL3-201ENST00000264596 COG6Q9Y2V7 657 aa25.54■■□□□ 1.68
NEIL3-201ENST00000264596 PDE3AQ14432 1141 aa25.53■■□□□ 1.68
NEIL3-201ENST00000264596 VGFO15240 615 aaPredicted RBP25.53■■□□□ 1.68
NEIL3-201ENST00000264596 CFAP53Q96M91 514 aa25.53■■□□□ 1.68
NEIL3-201ENST00000264596 USP32Q8NFA0 1604 aa25.52■■□□□ 1.68
NEIL3-201ENST00000264596 SLC4A3P48751 1232 aa25.52■■□□□ 1.68
NEIL3-201ENST00000264596 CABP2Q9NPB3 220 aa25.52■■□□□ 1.68
NEIL3-201ENST00000264596 IQSEC2Q5JU85 1478 aa25.52■■□□□ 1.68
NEIL3-201ENST00000264596 TULP4Q9NRJ4 1543 aa25.52■■□□□ 1.68
NEIL3-201ENST00000264596 ARHGEF28Q8N1W1 1705 aaKnown RBP25.51■■□□□ 1.67
NEIL3-201ENST00000264596 NEXMIFQ5QGS0 1516 aa25.5■■□□□ 1.67
NEIL3-201ENST00000264596 PPM1GO15355 546 aaPredicted RBP25.49■■□□□ 1.67
NEIL3-201ENST00000264596 PIK3C2BO00750 1634 aa25.49■■□□□ 1.67
NEIL3-201ENST00000264596 CLUAP1Q96AJ1 413 aa25.48■■□□□ 1.67
NEIL3-201ENST00000264596 ANKRD36BQ8N2N9 1353 aa25.48■■□□□ 1.67
NEIL3-201ENST00000264596 NINLQ9Y2I6 1382 aa25.48■■□□□ 1.67
NEIL3-201ENST00000264596 STK26Q9P289 416 aa25.47■■□□□ 1.67
NEIL3-201ENST00000264596 RARSP54136 660 aaKnown RBP25.47■■□□□ 1.67
NEIL3-201ENST00000264596 IDI1Q13907 227 aa25.46■■□□□ 1.67
NEIL3-201ENST00000264596 DAXXQ9UER7 740 aaPredicted RBP25.46■■□□□ 1.67
NEIL3-201ENST00000264596 DIP2CQ9Y2E4 1556 aa25.46■■□□□ 1.67
NEIL3-201ENST00000264596 PHF23Q9BUL5 403 aaPredicted RBP25.46■■□□□ 1.67
NEIL3-201ENST00000264596 BCL2L13Q9BXK5 485 aa25.46■■□□□ 1.67
NEIL3-201ENST00000264596 U2AF1L5P0DN76 240 aaPredicted RBP25.45■■□□□ 1.67
NEIL3-201ENST00000264596 U2AF1Q01081 240 aaKnown RBP eCLIP25.45■■□□□ 1.67
NEIL3-201ENST00000264596 WDR63Q8IWG1 891 aa25.45■■□□□ 1.67
NEIL3-201ENST00000264596 NEO1Q92859 1461 aa25.44■■□□□ 1.66
NEIL3-201ENST00000264596 USP35Q9P2H5 1018 aa25.44■■□□□ 1.66
NEIL3-201ENST00000264596 PUS7Q96PZ0 661 aaKnown RBP25.43■■□□□ 1.66
NEIL3-201ENST00000264596 TNNQ9UQP3 1299 aa25.43■■□□□ 1.66
NEIL3-201ENST00000264596 NSD2O96028 1365 aa25.42■■□□□ 1.66
NEIL3-201ENST00000264596 SRPK2P78362 688 aaKnown RBP25.42■■□□□ 1.66
NEIL3-201ENST00000264596 CCDC27Q2M243 656 aa25.4■■□□□ 1.66
NEIL3-201ENST00000264596 RLBP1P12271 317 aa25.39■■□□□ 1.66
NEIL3-201ENST00000264596 A0A1W2PP64 1363 aa25.39■■□□□ 1.65
NEIL3-201ENST00000264596 GGNBP2Q9H3C7 697 aa25.38■■□□□ 1.65
NEIL3-201ENST00000264596 ARHGAP31Q2M1Z3 1444 aa25.37■■□□□ 1.65
NEIL3-201ENST00000264596 MYO5BQ9ULV0 1848 aa25.37■■□□□ 1.65
NEIL3-201ENST00000264596 YEATS2Q9ULM3 1422 aa25.37■■□□□ 1.65
NEIL3-201ENST00000264596 MYH16Q9H6N6 1097 aa25.36■■□□□ 1.65
NEIL3-201ENST00000264596 MINK1Q8N4C8 1332 aaPredicted RBP25.36■■□□□ 1.65
NEIL3-201ENST00000264596 U2SURPO15042 1029 aaKnown RBP25.35■■□□□ 1.65
NEIL3-201ENST00000264596 SLC52A1Q9NWF4 448 aa25.35■■□□□ 1.65
NEIL3-201ENST00000264596 PCDHB15Q9Y5E8 787 aa25.34■■□□□ 1.65
NEIL3-201ENST00000264596 MAPK8IP3Q9UPT6 1336 aa25.34■■□□□ 1.65
NEIL3-201ENST00000264596 RICTORQ6R327 1708 aa25.34■■□□□ 1.65
NEIL3-201ENST00000264596 ABCC11Q96J66 1382 aa25.34■■□□□ 1.65
NEIL3-201ENST00000264596 VIRMAQ69YN4 1812 aaKnown RBP25.33■■□□□ 1.64
NEIL3-201ENST00000264596 PRKCSHP14314 528 aaPredicted RBP25.33■■□□□ 1.64
NEIL3-201ENST00000264596 PMFBP1Q8TBY8 1022 aa25.32■■□□□ 1.64
NEIL3-201ENST00000264596 PRAM1Q96QH2 718 aa25.32■■□□□ 1.64
NEIL3-201ENST00000264596 ZFYVE9O95405 1425 aa25.32■■□□□ 1.64
NEIL3-201ENST00000264596 TSR2Q969E8 191 aaKnown RBP25.32■■□□□ 1.64
NEIL3-201ENST00000264596 ADGRB2O60241 1585 aa25.31■■□□□ 1.64
NEIL3-201ENST00000264596 NFKBIBQ15653 356 aa25.31■■□□□ 1.64
NEIL3-201ENST00000264596 POGKQ9P215 609 aa25.31■■□□□ 1.64
NEIL3-201ENST00000264596 PTPRMP28827 1452 aa25.29■■□□□ 1.64
NEIL3-201ENST00000264596 SEC24BO95487 1268 aa25.29■■□□□ 1.64
NEIL3-201ENST00000264596 PREX1Q8TCU6 1659 aa25.29■■□□□ 1.64
NEIL3-201ENST00000264596 TMEM131LA2VDJ0 1609 aa25.28■■□□□ 1.64
NEIL3-201ENST00000264596 AAMPQ13685 434 aa25.27■■□□□ 1.64
NEIL3-201ENST00000264596 TERF2IPQ9NYB0 399 aa25.27■■□□□ 1.64
NEIL3-201ENST00000264596 USP19O94966 1318 aa25.27■■□□□ 1.64
NEIL3-201ENST00000264596 ATAD2Q6PL18 1390 aa25.27■■□□□ 1.64
NEIL3-201ENST00000264596 FYB1O15117 783 aa25.27■■□□□ 1.64
NEIL3-201ENST00000264596 NCBP3Q53F19 620 aaKnown RBP25.27■■□□□ 1.64
NEIL3-201ENST00000264596 FBXO31Q5XUX0 539 aaPredicted RBP25.27■■□□□ 1.64
NEIL3-201ENST00000264596 PLEKHF1Q96S99 279 aa25.27■■□□□ 1.64
NEIL3-201ENST00000264596 YTHDC2Q9H6S0 1430 aaKnown RBP25.26■■□□□ 1.63
NEIL3-201ENST00000264596 TMPOP42166 694 aaKnown RBP25.25■■□□□ 1.63
NEIL3-201ENST00000264596 EXOSC9Q06265 439 aaKnown RBP25.25■■□□□ 1.63
NEIL3-201ENST00000264596 ZKSCAN2Q63HK3 967 aa25.25■■□□□ 1.63
NEIL3-201ENST00000264596 FTSJ3Q8IY81 847 aaKnown RBP25.25■■□□□ 1.63
NEIL3-201ENST00000264596 PDZRN3Q9UPQ7 1066 aa25.25■■□□□ 1.63
NEIL3-201ENST00000264596 MVPQ14764 893 aaKnown RBP25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms