RNA–Protein interactions for RNA: ENST00000264254.10

PDCL3-201, Transcript of phosducin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCL3, Length 1,337 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCL3-201ENST00000264254 CADPS2Q86UW7 1296 aa24.27■■□□□ 1.48
PDCL3-201ENST00000264254 DCCP43146 1447 aa24.26■■□□□ 1.47
PDCL3-201ENST00000264254 ATF3P18847 181 aa24.26■■□□□ 1.47
PDCL3-201ENST00000264254 TOM1O60784 492 aa24.25■■□□□ 1.47
PDCL3-201ENST00000264254 PLEKHH1Q9ULM0 1364 aa24.24■■□□□ 1.47
PDCL3-201ENST00000264254 SAFB2Q14151 953 aaKnown RBP eCLIP24.22■■□□□ 1.47
PDCL3-201ENST00000264254 USP47Q96K76 1375 aa24.2■■□□□ 1.46
PDCL3-201ENST00000264254 SBNO2Q9Y2G9 1366 aa24.18■■□□□ 1.46
PDCL3-201ENST00000264254 UBAP1LF5GYI3 381 aa24.17■■□□□ 1.46
PDCL3-201ENST00000264254 EIF4G2P78344 907 aaKnown RBP eCLIP24.17■■□□□ 1.46
PDCL3-201ENST00000264254 MINK1Q8N4C8 1332 aaPredicted RBP24.17■■□□□ 1.46
PDCL3-201ENST00000264254 ARHGEF28Q8N1W1 1705 aaKnown RBP24.16■■□□□ 1.46
PDCL3-201ENST00000264254 SLAIN2Q9P270 581 aa24.15■■□□□ 1.46
PDCL3-201ENST00000264254 ST20-MTHFSA0A0A6YYL1 179 aa24.14■■□□□ 1.46
PDCL3-201ENST00000264254 WASLO00401 505 aaPredicted RBP24.14■■□□□ 1.46
PDCL3-201ENST00000264254 CDC42BPGQ6DT37 1551 aa24.14■■□□□ 1.46
PDCL3-201ENST00000264254 HIRIP3Q9BW71 556 aaPredicted RBP24.13■■□□□ 1.45
PDCL3-201ENST00000264254 EVC2Q86UK5 1308 aa24.13■■□□□ 1.45
PDCL3-201ENST00000264254 ADGRB2O60241 1585 aa24.12■■□□□ 1.45
PDCL3-201ENST00000264254 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.1■■□□□ 1.45
PDCL3-201ENST00000264254 XIRP1Q702N8 1843 aaKnown RBP24.1■■□□□ 1.45
PDCL3-201ENST00000264254 NALCNQ8IZF0 1738 aa24.1■■□□□ 1.45
PDCL3-201ENST00000264254 CDK19Q9BWU1 502 aa24.09■■□□□ 1.45
PDCL3-201ENST00000264254 MST1RQ04912 1400 aa24.08■■□□□ 1.45
PDCL3-201ENST00000264254 ANKARQ7Z5J8 1434 aa24.08■■□□□ 1.45
PDCL3-201ENST00000264254 TESK2Q96S53 571 aa24.08■■□□□ 1.44
PDCL3-201ENST00000264254 TMF1P82094 1093 aa24.07■■□□□ 1.44
PDCL3-201ENST00000264254 FBXO41Q8TF61 875 aa24.07■■□□□ 1.44
PDCL3-201ENST00000264254 PUS7Q96PZ0 661 aaKnown RBP24.07■■□□□ 1.44
PDCL3-201ENST00000264254 HSPA5P11021 654 aaKnown RBP24.06■■□□□ 1.44
PDCL3-201ENST00000264254 SRPK2P78362 688 aaKnown RBP24.06■■□□□ 1.44
PDCL3-201ENST00000264254 CDCA8Q53HL2 280 aa24.06■■□□□ 1.44
PDCL3-201ENST00000264254 C1orf167Q5SNV9 1468 aa24.06■■□□□ 1.44
PDCL3-201ENST00000264254 PIP4K2BP78356 416 aa24.04■■□□□ 1.44
PDCL3-201ENST00000264254 QRICH2Q9H0J4 1663 aa24.03■■□□□ 1.44
PDCL3-201ENST00000264254 TULP4Q9NRJ4 1543 aa24.02■■□□□ 1.44
PDCL3-201ENST00000264254 SCAF1Q9H7N4 1312 aaKnown RBP24.02■■□□□ 1.44
PDCL3-201ENST00000264254 CCDC61Q9Y6R9 512 aa24.02■■□□□ 1.44
PDCL3-201ENST00000264254 NUTM2FA1L443 756 aa24.01■■□□□ 1.43
PDCL3-201ENST00000264254 ESCO1Q5FWF5 840 aa24.01■■□□□ 1.43
PDCL3-201ENST00000264254 NUDT16Q96DE0 195 aaKnown RBP24.01■■□□□ 1.43
PDCL3-201ENST00000264254 ATAD2Q6PL18 1390 aa24■■□□□ 1.43
PDCL3-201ENST00000264254 BRINP3Q76B58 766 aa24■■□□□ 1.43
PDCL3-201ENST00000264254 CABP2Q9NPB3 220 aa23.99■■□□□ 1.43
PDCL3-201ENST00000264254 ORAI2Q96SN7 254 aa23.97■■□□□ 1.43
PDCL3-201ENST00000264254 PHF8Q9UPP1 1060 aa23.97■■□□□ 1.43
PDCL3-201ENST00000264254 FMN2Q9NZ56 1722 aa23.97■■□□□ 1.43
PDCL3-201ENST00000264254 PRR36Q9H6K5 1346 aa23.95■■□□□ 1.43
PDCL3-201ENST00000264254 ATP7BP35670 1465 aa23.95■■□□□ 1.42
PDCL3-201ENST00000264254 PLEKHG3A1L390 1219 aa23.93■■□□□ 1.42
PDCL3-201ENST00000264254 NPHP3Q7Z494 1330 aa23.93■■□□□ 1.42
PDCL3-201ENST00000264254 NINLQ9Y2I6 1382 aa23.92■■□□□ 1.42
PDCL3-201ENST00000264254 DISP3Q9P2K9 1392 aa23.9■■□□□ 1.42
PDCL3-201ENST00000264254 NGDNQ8NEJ9 315 aaKnown RBP23.9■■□□□ 1.42
PDCL3-201ENST00000264254 PPIP5K1Q6PFW1 1433 aa23.89■■□□□ 1.42
PDCL3-201ENST00000264254 FOXO3O43524 673 aa23.88■■□□□ 1.41
PDCL3-201ENST00000264254 CABP1Q9NZU7 370 aa23.88■■□□□ 1.41
PDCL3-201ENST00000264254 ROBO1Q9Y6N7 1651 aa23.88■■□□□ 1.41
PDCL3-201ENST00000264254 PSME1Q06323 249 aa23.87■■□□□ 1.41
PDCL3-201ENST00000264254 PMFBP1Q8TBY8 1022 aa23.87■■□□□ 1.41
PDCL3-201ENST00000264254 USP32Q8NFA0 1604 aa23.87■■□□□ 1.41
PDCL3-201ENST00000264254 ZNF692Q9BU19 519 aaPredicted RBP23.86■■□□□ 1.41
PDCL3-201ENST00000264254 KIF1AQ12756 1690 aa23.86■■□□□ 1.41
PDCL3-201ENST00000264254 TMC1Q8TDI8 760 aa23.85■■□□□ 1.41
PDCL3-201ENST00000264254 POLR3AO14802 1390 aaPredicted RBP23.85■■□□□ 1.41
PDCL3-201ENST00000264254 TERF2IPQ9NYB0 399 aa23.84■■□□□ 1.41
PDCL3-201ENST00000264254 ACEP12821 1306 aa23.84■■□□□ 1.41
PDCL3-201ENST00000264254 AHDC1Q5TGY3 1603 aaPredicted RBP23.84■■□□□ 1.41
PDCL3-201ENST00000264254 POTEDQ86YR6 584 aa23.84■■□□□ 1.41
PDCL3-201ENST00000264254 SOS2Q07890 1332 aaPredicted RBP23.83■■□□□ 1.41
PDCL3-201ENST00000264254 BRD4O60885 1362 aaPredicted RBP23.83■■□□□ 1.41
PDCL3-201ENST00000264254 KRT28Q7Z3Y7 464 aa23.83■■□□□ 1.4
PDCL3-201ENST00000264254 HDGFL2Q7Z4V5 671 aaPredicted RBP23.83■■□□□ 1.4
PDCL3-201ENST00000264254 LRRC59Q96AG4 307 aaKnown RBP23.83■■□□□ 1.4
PDCL3-201ENST00000264254 ITSN1Q15811 1721 aa23.82■■□□□ 1.4
PDCL3-201ENST00000264254 HSPA1LP34931 641 aa23.81■■□□□ 1.4
PDCL3-201ENST00000264254 SLC12A5Q9H2X9 1139 aa23.81■■□□□ 1.4
PDCL3-201ENST00000264254 POLR3GLQ9BT43 218 aa23.8■■□□□ 1.4
PDCL3-201ENST00000264254 TOPAZ1Q8N9V7 1692 aa23.79■■□□□ 1.4
PDCL3-201ENST00000264254 SBNO1A3KN83 1393 aa23.79■■□□□ 1.4
PDCL3-201ENST00000264254 KIF7Q2M1P5 1343 aa23.78■■□□□ 1.4
PDCL3-201ENST00000264254 C11orf95C9JLR9 678 aaPredicted RBP23.78■■□□□ 1.4
PDCL3-201ENST00000264254 DDX17Q92841 729 aaKnown RBP23.78■■□□□ 1.4
PDCL3-201ENST00000264254 PXDNQ92626 1479 aa23.76■■□□□ 1.39
PDCL3-201ENST00000264254 CPSF1Q10570 1443 aaKnown RBP23.76■■□□□ 1.39
PDCL3-201ENST00000264254 NHSL1Q5SYE7 1610 aa23.76■■□□□ 1.39
PDCL3-201ENST00000264254 ANKRD36BQ8N2N9 1353 aa23.75■■□□□ 1.39
PDCL3-201ENST00000264254 KTN1Q86UP2 1357 aaKnown RBP23.74■■□□□ 1.39
PDCL3-201ENST00000264254 CCDC7Q96M83 1385 aa23.74■■□□□ 1.39
PDCL3-201ENST00000264254 XPCQ01831 940 aaPredicted RBP23.74■■□□□ 1.39
PDCL3-201ENST00000264254 ILDR1Q86SU0 546 aaPredicted RBP23.74■■□□□ 1.39
PDCL3-201ENST00000264254 USP6P35125 1406 aa23.74■■□□□ 1.39
PDCL3-201ENST00000264254 SPATA31A3Q5VYP0 1347 aa23.73■■□□□ 1.39
PDCL3-201ENST00000264254 ARHGEF10O15013 1369 aa23.73■■□□□ 1.39
PDCL3-201ENST00000264254 JCADQ9P266 1359 aa23.73■■□□□ 1.39
PDCL3-201ENST00000264254 PAK3O75914 559 aaPredicted RBP23.72■■□□□ 1.39
PDCL3-201ENST00000264254 RGPD8O14715 1765 aaPredicted RBP23.72■■□□□ 1.39
PDCL3-201ENST00000264254 WASHC2AQ641Q2 1341 aa23.71■■□□□ 1.39
PDCL3-201ENST00000264254 A0A1W2PP64 1363 aa23.71■■□□□ 1.39
PDCL3-201ENST00000264254 PHLPP1O60346 1717 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms