RNA–Protein interactions for RNA: ENST00000264001.8

CKLF-201, Transcript of chemokine like factor, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CKLF, Length 669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-201ENST00000264001 YTHDC2Q9H6S0 1430 aaKnown RBP29.66■■■□□ 2.34
CKLF-201ENST00000264001 WAPLQ7Z5K2 1190 aa29.66■■■□□ 2.34
CKLF-201ENST00000264001 CDC42BPGQ6DT37 1551 aa29.64■■■□□ 2.34
CKLF-201ENST00000264001 CFAP70Q5T0N1 1121 aa29.64■■■□□ 2.34
CKLF-201ENST00000264001 ORAI2Q96SN7 254 aa29.63■■■□□ 2.33
CKLF-201ENST00000264001 PLEKHH1Q9ULM0 1364 aa29.63■■■□□ 2.33
CKLF-201ENST00000264001 ZNF772Q68DY9 489 aaPredicted RBP29.62■■■□□ 2.33
CKLF-201ENST00000264001 LRRC59Q96AG4 307 aaKnown RBP29.61■■■□□ 2.33
CKLF-201ENST00000264001 DHX57Q6P158 1386 aaKnown RBP29.58■■■□□ 2.33
CKLF-201ENST00000264001 PNPLA6Q8IY17 1366 aa29.56■■■□□ 2.32
CKLF-201ENST00000264001 NUTM2BA6NNL0 878 aaPredicted RBP29.56■■■□□ 2.32
CKLF-201ENST00000264001 NUTM2EB1AL46 878 aaPredicted RBP29.56■■■□□ 2.32
CKLF-201ENST00000264001 NUTM2AQ8IVF1 878 aaPredicted RBP29.56■■■□□ 2.32
CKLF-201ENST00000264001 SIRT1Q96EB6 747 aa29.56■■■□□ 2.32
CKLF-201ENST00000264001 KDM2AQ9Y2K7 1162 aa29.55■■■□□ 2.32
CKLF-201ENST00000264001 DCAF11Q8TEB1 546 aa29.54■■■□□ 2.32
CKLF-201ENST00000264001 SOS2Q07890 1332 aaPredicted RBP29.53■■■□□ 2.32
CKLF-201ENST00000264001 ESCO1Q5FWF5 840 aa29.53■■■□□ 2.32
CKLF-201ENST00000264001 FMN2Q9NZ56 1722 aa29.51■■■□□ 2.32
CKLF-201ENST00000264001 NUTM2FA1L443 756 aa29.51■■■□□ 2.31
CKLF-201ENST00000264001 CDK12Q9NYV4 1490 aaPredicted RBP29.49■■■□□ 2.31
CKLF-201ENST00000264001 ADGRB1O14514 1584 aa29.49■■■□□ 2.31
CKLF-201ENST00000264001 STAC3Q96MF2 364 aa29.49■■■□□ 2.31
CKLF-201ENST00000264001 COL22A1Q8NFW1 1626 aaPredicted RBP29.49■■■□□ 2.31
CKLF-201ENST00000264001 DLC1Q96QB1 1528 aa29.48■■■□□ 2.31
CKLF-201ENST00000264001 AFF2P51816 1311 aa29.47■■■□□ 2.31
CKLF-201ENST00000264001 PRAM1Q96QH2 718 aa29.47■■■□□ 2.31
CKLF-201ENST00000264001 NPHP3Q7Z494 1330 aa29.46■■■□□ 2.31
CKLF-201ENST00000264001 SAFB2Q14151 953 aaKnown RBP eCLIP29.45■■■□□ 2.31
CKLF-201ENST00000264001 FOXO3O43524 673 aa29.43■■■□□ 2.3
CKLF-201ENST00000264001 POGKQ9P215 609 aa29.43■■■□□ 2.3
CKLF-201ENST00000264001 PXDNQ92626 1479 aa29.42■■■□□ 2.3
CKLF-201ENST00000264001 RGPD8O14715 1765 aaPredicted RBP29.42■■■□□ 2.3
CKLF-201ENST00000264001 RXRBP28702 533 aa29.42■■■□□ 2.3
CKLF-201ENST00000264001 TRAK1Q9UPV9 953 aa29.42■■■□□ 2.3
CKLF-201ENST00000264001 C8orf37Q96NL8 207 aa29.41■■■□□ 2.3
CKLF-201ENST00000264001 MARF1Q9Y4F3 1742 aaKnown RBP29.41■■■□□ 2.3
CKLF-201ENST00000264001 KIF1AQ12756 1690 aa29.4■■■□□ 2.3
CKLF-201ENST00000264001 XPCQ01831 940 aaPredicted RBP29.39■■■□□ 2.3
CKLF-201ENST00000264001 ADAMTS2O95450 1211 aa29.35■■■□□ 2.29
CKLF-201ENST00000264001 ADGRB2O60241 1585 aa29.35■■■□□ 2.29
CKLF-201ENST00000264001 RGS12O14924 1447 aa29.34■■■□□ 2.29
CKLF-201ENST00000264001 PHF8Q9UPP1 1060 aa29.32■■■□□ 2.28
CKLF-201ENST00000264001 ARHGEF28Q8N1W1 1705 aaKnown RBP29.31■■■□□ 2.28
CKLF-201ENST00000264001 USP32Q8NFA0 1604 aa29.31■■■□□ 2.28
CKLF-201ENST00000264001 MINK1Q8N4C8 1332 aaPredicted RBP29.3■■■□□ 2.28
CKLF-201ENST00000264001 HIRIP3Q9BW71 556 aaPredicted RBP29.3■■■□□ 2.28
CKLF-201ENST00000264001 KIAA1210Q9ULL0 1709 aa29.29■■■□□ 2.28
CKLF-201ENST00000264001 UPF1Q92900 1129 aaKnown RBP eCLIP29.29■■■□□ 2.28
CKLF-201ENST00000264001 NGLY1Q96IV0 654 aa29.29■■■□□ 2.28
CKLF-201ENST00000264001 ANKARQ7Z5J8 1434 aa29.28■■■□□ 2.28
CKLF-201ENST00000264001 RBM6P78332 1123 aaKnown RBP29.28■■■□□ 2.28
CKLF-201ENST00000264001 KRT28Q7Z3Y7 464 aa29.28■■■□□ 2.28
CKLF-201ENST00000264001 QTRT2Q9H974 415 aaKnown RBP29.27■■■□□ 2.28
CKLF-201ENST00000264001 SPATA31A3Q5VYP0 1347 aa29.26■■■□□ 2.27
CKLF-201ENST00000264001 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.25■■■□□ 2.27
CKLF-201ENST00000264001 WASLO00401 505 aaPredicted RBP29.22■■■□□ 2.27
CKLF-201ENST00000264001 PSME1Q06323 249 aa29.22■■■□□ 2.27
CKLF-201ENST00000264001 PMFBP1Q8TBY8 1022 aa29.22■■■□□ 2.27
CKLF-201ENST00000264001 EIF3AQ14152 1382 aaKnown RBP29.22■■■□□ 2.27
CKLF-201ENST00000264001 TULP4Q9NRJ4 1543 aa29.21■■■□□ 2.27
CKLF-201ENST00000264001 USP21Q9UK80 565 aa29.21■■■□□ 2.27
CKLF-201ENST00000264001 PRR36Q9H6K5 1346 aa29.2■■■□□ 2.27
CKLF-201ENST00000264001 TNS3Q68CZ2 1445 aa29.2■■■□□ 2.27
CKLF-201ENST00000264001 NBPF1Q3BBV0 1214 aa29.2■■■□□ 2.26
CKLF-201ENST00000264001 SIN3AQ96ST3 1273 aa29.2■■■□□ 2.26
CKLF-201ENST00000264001 FNBP4Q8N3X1 1017 aaPredicted RBP29.19■■■□□ 2.26
CKLF-201ENST00000264001 ATRNO75882 1429 aa29.19■■■□□ 2.26
CKLF-201ENST00000264001 TRPC5Q9UL62 973 aaPredicted RBP29.18■■■□□ 2.26
CKLF-201ENST00000264001 ABCA3Q99758 1704 aa29.17■■■□□ 2.26
CKLF-201ENST00000264001 SBNO1A3KN83 1393 aa29.17■■■□□ 2.26
CKLF-201ENST00000264001 L3MBTL2Q969R5 705 aa29.17■■■□□ 2.26
CKLF-201ENST00000264001 NEUROD1Q13562 356 aa29.13■■■□□ 2.25
CKLF-201ENST00000264001 ITSN1Q15811 1721 aa29.12■■■□□ 2.25
CKLF-201ENST00000264001 TRPM3Q9HCF6 1732 aaPredicted RBP29.12■■■□□ 2.25
CKLF-201ENST00000264001 LMOD2Q6P5Q4 547 aa29.12■■■□□ 2.25
CKLF-201ENST00000264001 ATAD2Q6PL18 1390 aa29.12■■■□□ 2.25
CKLF-201ENST00000264001 BCL9LQ86UU0 1499 aa29.11■■■□□ 2.25
CKLF-201ENST00000264001 ARHGEF10O15013 1369 aa29.11■■■□□ 2.25
CKLF-201ENST00000264001 ATP7BP35670 1465 aa29.1■■■□□ 2.25
CKLF-201ENST00000264001 GPRASP1Q5JY77 1395 aa29.1■■■□□ 2.25
CKLF-201ENST00000264001 PLCH1Q4KWH8 1693 aa29.09■■■□□ 2.25
CKLF-201ENST00000264001 CABLES1Q8TDN4 633 aa29.09■■■□□ 2.25
CKLF-201ENST00000264001 NUDT16Q96DE0 195 aaKnown RBP29.09■■■□□ 2.25
CKLF-201ENST00000264001 CDK19Q9BWU1 502 aa29.09■■■□□ 2.25
CKLF-201ENST00000264001 PLEKHG5O94827 1062 aa29.08■■■□□ 2.25
CKLF-201ENST00000264001 HAP1P54257 671 aaPredicted RBP29.08■■■□□ 2.25
CKLF-201ENST00000264001 NGDNQ8NEJ9 315 aaKnown RBP29.08■■■□□ 2.25
CKLF-201ENST00000264001 NWD2Q9ULI1 1742 aa29.08■■■□□ 2.25
CKLF-201ENST00000264001 ALS2Q96Q42 1657 aa29.05■■■□□ 2.24
CKLF-201ENST00000264001 SLIT2O94813 1529 aa29.05■■■□□ 2.24
CKLF-201ENST00000264001 TRPM1Q7Z4N2 1603 aa29.05■■■□□ 2.24
CKLF-201ENST00000264001 CENPJQ9HC77 1338 aaPredicted RBP29.03■■■□□ 2.24
CKLF-201ENST00000264001 GLI3P10071 1580 aa29.03■■■□□ 2.24
CKLF-201ENST00000264001 TOPAZ1Q8N9V7 1692 aa29.02■■■□□ 2.24
CKLF-201ENST00000264001 TRIM26Q12899 539 aaPredicted RBP29.01■■■□□ 2.23
CKLF-201ENST00000264001 QRICH2Q9H0J4 1663 aa29.01■■■□□ 2.23
CKLF-201ENST00000264001 UNC5CLQ8IV45 518 aa29■■■□□ 2.23
CKLF-201ENST00000264001 PAK3O75914 559 aaPredicted RBP28.98■■■□□ 2.23
CKLF-201ENST00000264001 CCDC61Q9Y6R9 512 aa28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms