RNA–Protein interactions for RNA: ENST00000262965.9

TCF3-201, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-201ENST00000262965 CHMP4AQ9BY43 222 aa16.59■□□□□ 0.25
TCF3-201ENST00000262965 EPRSP07814 1512 aaKnown RBP16.59■□□□□ 0.25
TCF3-201ENST00000262965 CAVIN1Q6NZI2 390 aaKnown RBP16.59■□□□□ 0.25
TCF3-201ENST00000262965 NUCB2P80303 420 aa16.58■□□□□ 0.25
TCF3-201ENST00000262965 MPNDQ8N594 471 aa16.58■□□□□ 0.24
TCF3-201ENST00000262965 CLSTN1O94985 981 aa16.57■□□□□ 0.24
TCF3-201ENST00000262965 FAM69CQ0P6D2 419 aa16.57■□□□□ 0.24
TCF3-201ENST00000262965 INTS3Q68E01 1043 aaKnown RBP16.57■□□□□ 0.24
TCF3-201ENST00000262965 FBXW7Q969H0 707 aa16.57■□□□□ 0.24
TCF3-201ENST00000262965 TEFQ10587 303 aa16.57■□□□□ 0.24
TCF3-201ENST00000262965 RASSF8Q8NHQ8 419 aa16.57■□□□□ 0.24
TCF3-201ENST00000262965 ARHGAP5Q13017 1502 aa16.56■□□□□ 0.24
TCF3-201ENST00000262965 C9orf78Q9NZ63 289 aaPredicted RBP16.56■□□□□ 0.24
TCF3-201ENST00000262965 BICD2Q8TD16 824 aa16.56■□□□□ 0.24
TCF3-201ENST00000262965 PCF11O94913 1555 aaKnown RBP16.56■□□□□ 0.24
TCF3-201ENST00000262965 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.55■□□□□ 0.24
TCF3-201ENST00000262965 SLC12A5Q9H2X9 1139 aa16.55■□□□□ 0.24
TCF3-201ENST00000262965 ZKSCAN1P17029 563 aaPredicted RBP16.55■□□□□ 0.24
TCF3-201ENST00000262965 FOSBP53539 338 aa16.55■□□□□ 0.24
TCF3-201ENST00000262965 AFAP1Q8N556 730 aa16.55■□□□□ 0.24
TCF3-201ENST00000262965 CDK13Q14004 1512 aaKnown RBP16.55■□□□□ 0.24
TCF3-201ENST00000262965 KIF3AQ9Y496 699 aa16.55■□□□□ 0.24
TCF3-201ENST00000262965 C20orf194Q5TEA3 1177 aa16.54■□□□□ 0.24
TCF3-201ENST00000262965 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.54■□□□□ 0.24
TCF3-201ENST00000262965 PES1O00541 588 aaKnown RBP16.54■□□□□ 0.24
TCF3-201ENST00000262965 CDC45O75419 566 aa16.53■□□□□ 0.24
TCF3-201ENST00000262965 GNAI1P63096 354 aa16.53■□□□□ 0.24
TCF3-201ENST00000262965 SMC3Q9UQE7 1217 aa16.53■□□□□ 0.24
TCF3-201ENST00000262965 SMG6Q86US8 1419 aaKnown RBP16.53■□□□□ 0.24
TCF3-201ENST00000262965 PDE4CQ08493 712 aa16.52■□□□□ 0.24
TCF3-201ENST00000262965 PDE3AQ14432 1141 aa16.52■□□□□ 0.24
TCF3-201ENST00000262965 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.52■□□□□ 0.246e-10■■■■■ 33.2
TCF3-201ENST00000262965 PRPF40AO75400 957 aaKnown RBP16.52■□□□□ 0.24
TCF3-201ENST00000262965 NEK4P51957 841 aa16.52■□□□□ 0.24
TCF3-201ENST00000262965 IFIT2P09913 472 aaKnown RBP16.51■□□□□ 0.23
TCF3-201ENST00000262965 MAP3K1Q13233 1512 aa16.51■□□□□ 0.23
TCF3-201ENST00000262965 CCDC34Q96HJ3 373 aa16.51■□□□□ 0.23
TCF3-201ENST00000262965 TSPYL4Q9UJ04 414 aa16.51■□□□□ 0.23
TCF3-201ENST00000262965 ZNF771Q7L3S4 317 aaPredicted RBP16.51■□□□□ 0.23
TCF3-201ENST00000262965 EID1Q9Y6B2 187 aa16.51■□□□□ 0.23
TCF3-201ENST00000262965 SUPT6HQ7KZ85 1726 aaKnown RBP16.51■□□□□ 0.23
TCF3-201ENST00000262965 RBM10P98175 930 aaKnown RBP16.51■□□□□ 0.23
TCF3-201ENST00000262965 RUFY2Q8WXA3 655 aa16.5■□□□□ 0.23
TCF3-201ENST00000262965 PLB1Q6P1J6 1458 aa16.5■□□□□ 0.23
TCF3-201ENST00000262965 PRKAR2BP31323 418 aa16.5■□□□□ 0.23
TCF3-201ENST00000262965 CCDC27Q2M243 656 aa16.5■□□□□ 0.23
TCF3-201ENST00000262965 HFM1A2PYH4 1435 aa16.49■□□□□ 0.23
TCF3-201ENST00000262965 NOC3LQ8WTT2 800 aaKnown RBP16.49■□□□□ 0.23
TCF3-201ENST00000262965 NOB1Q9ULX3 412 aaKnown RBP16.49■□□□□ 0.23
TCF3-201ENST00000262965 IFT57Q9NWB7 429 aa16.48■□□□□ 0.23
TCF3-201ENST00000262965 TPM3P06753 285 aa16.47■□□□□ 0.23
TCF3-201ENST00000262965 C9orf84Q5VXU9 1444 aa16.47■□□□□ 0.23
TCF3-201ENST00000262965 GOLGA6L1Q8N7Z2 621 aa16.47■□□□□ 0.23
TCF3-201ENST00000262965 NCBP3Q53F19 620 aaKnown RBP16.47■□□□□ 0.23
TCF3-201ENST00000262965 PLEKHH2Q8IVE3 1493 aa16.46■□□□□ 0.23
TCF3-201ENST00000262965 AAMPQ13685 434 aa16.46■□□□□ 0.23
TCF3-201ENST00000262965 HOMER1Q86YM7 354 aa16.46■□□□□ 0.23
TCF3-201ENST00000262965 NUTM2GQ5VZR2 741 aa16.46■□□□□ 0.23
TCF3-201ENST00000262965 MCM4P33991 863 aa16.45■□□□□ 0.22
TCF3-201ENST00000262965 C1orf141Q5JVX7 400 aa16.45■□□□□ 0.22
TCF3-201ENST00000262965 FIBPO43427 364 aa16.45■□□□□ 0.22
TCF3-201ENST00000262965 NEXNQ0ZGT2 675 aa16.45■□□□□ 0.22
TCF3-201ENST00000262965 ZNF428Q96B54 188 aa16.45■□□□□ 0.22
TCF3-201ENST00000262965 DAPK1P53355 1430 aa16.44■□□□□ 0.22
TCF3-201ENST00000262965 CPLX1O14810 134 aa16.44■□□□□ 0.22
TCF3-201ENST00000262965 TPD52L1Q16890 204 aaPredicted RBP16.44■□□□□ 0.22
TCF3-201ENST00000262965 TWISTNBQ3B726 338 aaPredicted RBP16.43■□□□□ 0.22
TCF3-201ENST00000262965 GRPEL1Q9HAV7 217 aa16.43■□□□□ 0.22
TCF3-201ENST00000262965 SURF6O75683 361 aaKnown RBP16.43■□□□□ 0.22
TCF3-201ENST00000262965 AIMP1Q12904 312 aaKnown RBP16.43■□□□□ 0.22
TCF3-201ENST00000262965 G3BP1Q13283 466 aaKnown RBP eCLIP16.43■□□□□ 0.22
TCF3-201ENST00000262965 SASS6Q6UVJ0 657 aa16.43■□□□□ 0.22
TCF3-201ENST00000262965 ROCK1Q13464 1354 aa16.43■□□□□ 0.22
TCF3-201ENST00000262965 APPP05067 770 aa16.42■□□□□ 0.22
TCF3-201ENST00000262965 KIAA1107Q9UPP5 1409 aa16.42■□□□□ 0.22
TCF3-201ENST00000262965 ATF7IPQ6VMQ6 1270 aa16.41■□□□□ 0.22
TCF3-201ENST00000262965 NAIPQ13075 1403 aa16.41■□□□□ 0.22
TCF3-201ENST00000262965 UBTFL1P0CB47 393 aaPredicted RBP16.41■□□□□ 0.22
TCF3-201ENST00000262965 RNF20Q5VTR2 975 aa16.41■□□□□ 0.22
TCF3-201ENST00000262965 MVPQ14764 893 aaKnown RBP16.41■□□□□ 0.22
TCF3-201ENST00000262965 STAC3Q96MF2 364 aa16.4■□□□□ 0.22
TCF3-201ENST00000262965 ESPNB1AK53 854 aa16.4■□□□□ 0.22
TCF3-201ENST00000262965 GTF2E1P29083 439 aaPredicted RBP16.39■□□□□ 0.21
TCF3-201ENST00000262965 CPLX2Q6PUV4 134 aaKnown RBP16.39■□□□□ 0.21
TCF3-201ENST00000262965 RABEP1Q15276 862 aa16.39■□□□□ 0.21
TCF3-201ENST00000262965 ARHGEF11O15085 1522 aa16.39■□□□□ 0.21
TCF3-201ENST00000262965 SLFN5Q08AF3 891 aa16.39■□□□□ 0.21
TCF3-201ENST00000262965 CCDC39Q9UFE4 941 aa16.39■□□□□ 0.21
TCF3-201ENST00000262965 CCDC73Q6ZRK6 1079 aa16.38■□□□□ 0.21
TCF3-201ENST00000262965 SPC24Q8NBT2 197 aa16.38■□□□□ 0.21
TCF3-201ENST00000262965 KDM4AO75164 1064 aa16.38■□□□□ 0.21
TCF3-201ENST00000262965 MBD3O95983 291 aa16.38■□□□□ 0.21
TCF3-201ENST00000262965 FMNL2Q96PY5 1086 aa16.38■□□□□ 0.21
TCF3-201ENST00000262965 TRIM5Q9C035 493 aa16.38■□□□□ 0.21
TCF3-201ENST00000262965 SCAPERQ9BY12 1400 aa16.38■□□□□ 0.21
TCF3-201ENST00000262965 WWC1Q8IX03 1113 aa16.37■□□□□ 0.21
TCF3-201ENST00000262965 NEUROD6Q96NK8 337 aa16.37■□□□□ 0.21
TCF3-201ENST00000262965 KIF21AQ7Z4S6 1674 aa16.37■□□□□ 0.21
TCF3-201ENST00000262965 A0A0U1RQG5 324 aaPredicted RBP16.37■□□□□ 0.21
TCF3-201ENST00000262965 K7ELQ4 463 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms