RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 DDX11L8A8MPP1 907 aa18.94■□□□□ 0.62
XRCC1-201ENST00000262887 C22orf23Q9BZE7 217 aa18.94■□□□□ 0.62
XRCC1-201ENST00000262887 DUOX2Q9NRD8 1548 aa18.94■□□□□ 0.62
XRCC1-201ENST00000262887 BCL2L13Q9BXK5 485 aa18.94■□□□□ 0.62
XRCC1-201ENST00000262887 MFAP1P55081 439 aaKnown RBP18.92■□□□□ 0.62
XRCC1-201ENST00000262887 RRP7AQ9Y3A4 280 aaKnown RBP18.92■□□□□ 0.62
XRCC1-201ENST00000262887 POLR3AO14802 1390 aaPredicted RBP18.91■□□□□ 0.62
XRCC1-201ENST00000262887 ERBB4Q15303 1308 aa18.91■□□□□ 0.62
XRCC1-201ENST00000262887 RTEL1-TNFRSF6BF6WH68 1400 aa18.9■□□□□ 0.62
XRCC1-201ENST00000262887 TRIM44Q96DX7 344 aaPredicted RBP18.9■□□□□ 0.62
XRCC1-201ENST00000262887 CARD14Q9BXL6 1004 aa18.9■□□□□ 0.62
XRCC1-201ENST00000262887 SPHKAPQ2M3C7 1700 aa18.9■□□□□ 0.62
XRCC1-201ENST00000262887 TTC37Q6PGP7 1564 aa18.9■□□□□ 0.62
XRCC1-201ENST00000262887 HSCBQ8IWL3 235 aa18.89■□□□□ 0.61
XRCC1-201ENST00000262887 STAC3Q96MF2 364 aa18.89■□□□□ 0.61
XRCC1-201ENST00000262887 CEP152O94986 1710 aa18.88■□□□□ 0.61
XRCC1-201ENST00000262887 RUNDC1Q96C34 613 aa18.88■□□□□ 0.61
XRCC1-201ENST00000262887 TCP11L2Q8N4U5 519 aa18.87■□□□□ 0.61
XRCC1-201ENST00000262887 MVPQ14764 893 aaKnown RBP18.87■□□□□ 0.61
XRCC1-201ENST00000262887 ZNF692Q9BU19 519 aaPredicted RBP18.87■□□□□ 0.61
XRCC1-201ENST00000262887 TPM2P07951 284 aa18.86■□□□□ 0.61
XRCC1-201ENST00000262887 WDR63Q8IWG1 891 aa18.86■□□□□ 0.61
XRCC1-201ENST00000262887 ERVK-7P63135 1459 aa18.86■□□□□ 0.61
XRCC1-201ENST00000262887 TRPM2O94759 1503 aa18.84■□□□□ 0.61
XRCC1-201ENST00000262887 FTSJ3Q8IY81 847 aaKnown RBP18.84■□□□□ 0.61
XRCC1-201ENST00000262887 RBM10P98175 930 aaKnown RBP18.84■□□□□ 0.61
XRCC1-201ENST00000262887 PHF23Q9BUL5 403 aaPredicted RBP18.83■□□□□ 0.61
XRCC1-201ENST00000262887 IQSEC2Q5JU85 1478 aa18.83■□□□□ 0.61
XRCC1-201ENST00000262887 TNNT2P45379 298 aaPredicted RBP18.83■□□□□ 0.6
XRCC1-201ENST00000262887 NCOA3Q9Y6Q9 1424 aa18.83■□□□□ 0.6
XRCC1-201ENST00000262887 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.83■□□□□ 0.6
XRCC1-201ENST00000262887 DDIT3P35638 169 aa18.82■□□□□ 0.6
XRCC1-201ENST00000262887 MORC1Q86VD1 984 aa18.82■□□□□ 0.6
XRCC1-201ENST00000262887 SHPRHQ149N8 1683 aa18.82■□□□□ 0.6
XRCC1-201ENST00000262887 ZKSCAN2Q63HK3 967 aa18.82■□□□□ 0.6
XRCC1-201ENST00000262887 GAS2L3Q86XJ1 694 aa18.81■□□□□ 0.6
XRCC1-201ENST00000262887 DZIP1LQ8IYY4 767 aaKnown RBP18.81■□□□□ 0.6
XRCC1-201ENST00000262887 A0A0U1RQG5 324 aaPredicted RBP18.8■□□□□ 0.6
XRCC1-201ENST00000262887 SKOR2Q2VWA4 1001 aaPredicted RBP18.8■□□□□ 0.6
XRCC1-201ENST00000262887 TNPO1Q92973 898 aaKnown RBP18.8■□□□□ 0.6
XRCC1-201ENST00000262887 GBP4Q96PP9 640 aa18.8■□□□□ 0.6
XRCC1-201ENST00000262887 CLTCL1P53675 1640 aa18.8■□□□□ 0.6
XRCC1-201ENST00000262887 CFAP70Q5T0N1 1121 aa18.79■□□□□ 0.6
XRCC1-201ENST00000262887 PDCL3Q9H2J4 239 aa18.79■□□□□ 0.6
XRCC1-201ENST00000262887 CCDC27Q2M243 656 aa18.78■□□□□ 0.6
XRCC1-201ENST00000262887 CIZ1Q9ULV3 898 aaPredicted RBP18.78■□□□□ 0.6
XRCC1-201ENST00000262887 KANK1Q14678 1352 aa18.78■□□□□ 0.6
XRCC1-201ENST00000262887 KIAA1210Q9ULL0 1709 aa18.78■□□□□ 0.6
XRCC1-201ENST00000262887 SNX21Q969T3 373 aa18.78■□□□□ 0.6
XRCC1-201ENST00000262887 NSD3Q9BZ95 1437 aa18.77■□□□□ 0.6
XRCC1-201ENST00000262887 PTMSP20962 102 aa18.77■□□□□ 0.6
XRCC1-201ENST00000262887 HDAC1Q13547 482 aaPredicted RBP18.77■□□□□ 0.6
XRCC1-201ENST00000262887 PTPRTO14522 1441 aa18.77■□□□□ 0.6
XRCC1-201ENST00000262887 SMC5Q8IY18 1101 aa18.77■□□□□ 0.59
XRCC1-201ENST00000262887 KIAA1211Q6ZU35 1233 aa18.76■□□□□ 0.59
XRCC1-201ENST00000262887 HSP90AB1P08238 724 aaKnown RBP18.75■□□□□ 0.59
XRCC1-201ENST00000262887 RBM25P49756 843 aaKnown RBP18.75■□□□□ 0.59
XRCC1-201ENST00000262887 CALD1Q05682 793 aaKnown RBP18.75■□□□□ 0.59
XRCC1-201ENST00000262887 CCDC173Q0VFZ6 552 aa18.75■□□□□ 0.59
XRCC1-201ENST00000262887 RAB3GAP1Q15042 981 aa18.74■□□□□ 0.59
XRCC1-201ENST00000262887 ITPRIPQ8IWB1 547 aa18.74■□□□□ 0.59
XRCC1-201ENST00000262887 SMC4Q9NTJ3 1288 aa18.74■□□□□ 0.59
XRCC1-201ENST00000262887 DDX19BQ9UMR2 479 aa18.74■□□□□ 0.59
XRCC1-201ENST00000262887 CFAP53Q96M91 514 aa18.73■□□□□ 0.59
XRCC1-201ENST00000262887 PRDM4Q9UKN5 801 aa18.73■□□□□ 0.59
XRCC1-201ENST00000262887 MTHFSP49914 203 aa18.73■□□□□ 0.59
XRCC1-201ENST00000262887 SHROOM2Q13796 1616 aa18.73■□□□□ 0.59
XRCC1-201ENST00000262887 TRIM27P14373 513 aa18.73■□□□□ 0.59
XRCC1-201ENST00000262887 FGD1P98174 961 aa18.73■□□□□ 0.59
XRCC1-201ENST00000262887 PPP1R9BQ96SB3 815 aa18.72■□□□□ 0.59
XRCC1-201ENST00000262887 CT47B1P0C2W7 299 aaPredicted RBP18.71■□□□□ 0.59
XRCC1-201ENST00000262887 ZSCAN30Q86W11 494 aa18.71■□□□□ 0.59
XRCC1-201ENST00000262887 ABCA6Q8N139 1617 aa18.71■□□□□ 0.59
XRCC1-201ENST00000262887 ZNF518AQ6AHZ1 1483 aa18.71■□□□□ 0.59
XRCC1-201ENST00000262887 ADGRF5Q8IZF2 1346 aa18.71■□□□□ 0.59
XRCC1-201ENST00000262887 TSR2Q969E8 191 aaKnown RBP18.71■□□□□ 0.59
XRCC1-201ENST00000262887 MAP3K4Q9Y6R4 1608 aa18.7■□□□□ 0.58
XRCC1-201ENST00000262887 SBNO2Q9Y2G9 1366 aa18.7■□□□□ 0.58
XRCC1-201ENST00000262887 NASPP49321 788 aaPredicted RBP18.7■□□□□ 0.58
XRCC1-201ENST00000262887 ANP32BQ92688 251 aaKnown RBP18.7■□□□□ 0.58
XRCC1-201ENST00000262887 OFD1O75665 1012 aa18.69■□□□□ 0.58
XRCC1-201ENST00000262887 U2AF1L5P0DN76 240 aaPredicted RBP18.69■□□□□ 0.58
XRCC1-201ENST00000262887 U2AF1Q01081 240 aaKnown RBP eCLIP18.69■□□□□ 0.58
XRCC1-201ENST00000262887 SLC12A5Q9H2X9 1139 aa18.69■□□□□ 0.58
XRCC1-201ENST00000262887 ATF7IPQ6VMQ6 1270 aa18.69■□□□□ 0.58
XRCC1-201ENST00000262887 TRAPPC8Q9Y2L5 1435 aa18.68■□□□□ 0.58
XRCC1-201ENST00000262887 MYOM2P54296 1465 aa18.68■□□□□ 0.58
XRCC1-201ENST00000262887 NCBP3Q53F19 620 aaKnown RBP18.68■□□□□ 0.58
XRCC1-201ENST00000262887 EFCAB2Q5VUJ9 269 aa18.68■□□□□ 0.58
XRCC1-201ENST00000262887 EXOSC9Q06265 439 aaKnown RBP18.68■□□□□ 0.58
XRCC1-201ENST00000262887 MSNP26038 577 aaKnown RBP18.67■□□□□ 0.58
XRCC1-201ENST00000262887 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.67■□□□□ 0.58
XRCC1-201ENST00000262887 SSH1Q8WYL5 1049 aa18.67■□□□□ 0.58
XRCC1-201ENST00000262887 FOXD4L1Q9NU39 408 aa18.67■□□□□ 0.58
XRCC1-201ENST00000262887 SPAG9O60271 1321 aaKnown RBP18.67■□□□□ 0.58
XRCC1-201ENST00000262887 LNPKQ9C0E8 428 aa18.66■□□□□ 0.58
XRCC1-201ENST00000262887 PLCH2O75038 1416 aa18.66■□□□□ 0.58
XRCC1-201ENST00000262887 MYO3AQ8NEV4 1616 aa18.66■□□□□ 0.58
XRCC1-201ENST00000262887 TET3O43151 1660 aa18.66■□□□□ 0.58
XRCC1-201ENST00000262887 GOLGA6L22H0YM25 854 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms