RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 ADGRL3Q9HAR2 1447 aa23.49■■□□□ 1.35
CHCHD3-201ENST00000262570 IQSEC2Q5JU85 1478 aa23.47■■□□□ 1.35
CHCHD3-201ENST00000262570 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.47■■□□□ 1.35
CHCHD3-201ENST00000262570 MSH6P52701 1360 aa23.47■■□□□ 1.35
CHCHD3-201ENST00000262570 ST20-MTHFSA0A0A6YYL1 179 aa23.46■■□□□ 1.35
CHCHD3-201ENST00000262570 MINK1Q8N4C8 1332 aaPredicted RBP23.45■■□□□ 1.34
CHCHD3-201ENST00000262570 EIF4G2P78344 907 aaKnown RBP eCLIP23.44■■□□□ 1.342e-10■■■■□ 24.2
CHCHD3-201ENST00000262570 NALCNQ8IZF0 1738 aa23.43■■□□□ 1.34
CHCHD3-201ENST00000262570 HIRIP3Q9BW71 556 aaPredicted RBP23.43■■□□□ 1.34
CHCHD3-201ENST00000262570 DCCP43146 1447 aa23.42■■□□□ 1.34
CHCHD3-201ENST00000262570 SBNO2Q9Y2G9 1366 aa23.41■■□□□ 1.34
CHCHD3-201ENST00000262570 ATF3P18847 181 aa23.4■■□□□ 1.34
CHCHD3-201ENST00000262570 CADPS2Q86UW7 1296 aa23.4■■□□□ 1.34
CHCHD3-201ENST00000262570 TESK2Q96S53 571 aa23.4■■□□□ 1.34
CHCHD3-201ENST00000262570 HSPA5P11021 654 aaKnown RBP23.4■■□□□ 1.34
CHCHD3-201ENST00000262570 QRICH2Q9H0J4 1663 aa23.39■■□□□ 1.34
CHCHD3-201ENST00000262570 ADGRB2O60241 1585 aa23.39■■□□□ 1.33
CHCHD3-201ENST00000262570 CDC42BPGQ6DT37 1551 aa23.38■■□□□ 1.33
CHCHD3-201ENST00000262570 WASLO00401 505 aaPredicted RBP23.38■■□□□ 1.33
CHCHD3-201ENST00000262570 SLC24A1O60721 1099 aa23.35■■□□□ 1.33
CHCHD3-201ENST00000262570 TOM1O60784 492 aa23.35■■□□□ 1.33
CHCHD3-201ENST00000262570 CDK19Q9BWU1 502 aa23.35■■□□□ 1.33
CHCHD3-201ENST00000262570 SLAIN2Q9P270 581 aa23.34■■□□□ 1.33
CHCHD3-201ENST00000262570 EVC2Q86UK5 1308 aa23.34■■□□□ 1.33
CHCHD3-201ENST00000262570 UBAP1LF5GYI3 381 aa23.33■■□□□ 1.33
CHCHD3-201ENST00000262570 TULP4Q9NRJ4 1543 aa23.32■■□□□ 1.32
CHCHD3-201ENST00000262570 MST1RQ04912 1400 aa23.32■■□□□ 1.32
CHCHD3-201ENST00000262570 NUTM2FA1L443 756 aa23.31■■□□□ 1.32
CHCHD3-201ENST00000262570 C1orf167Q5SNV9 1468 aa23.29■■□□□ 1.32
CHCHD3-201ENST00000262570 FMN2Q9NZ56 1722 aa23.29■■□□□ 1.32
CHCHD3-201ENST00000262570 SRPK2P78362 688 aaKnown RBP23.29■■□□□ 1.32
CHCHD3-201ENST00000262570 TMF1P82094 1093 aa23.29■■□□□ 1.32
CHCHD3-201ENST00000262570 CABP2Q9NPB3 220 aa23.28■■□□□ 1.32
CHCHD3-201ENST00000262570 PRR36Q9H6K5 1346 aa23.28■■□□□ 1.32
CHCHD3-201ENST00000262570 ANKARQ7Z5J8 1434 aa23.27■■□□□ 1.32
CHCHD3-201ENST00000262570 NUDT16Q96DE0 195 aaKnown RBP23.27■■□□□ 1.32
CHCHD3-201ENST00000262570 DISP3Q9P2K9 1392 aa23.26■■□□□ 1.31
CHCHD3-201ENST00000262570 PUS7Q96PZ0 661 aaKnown RBP23.26■■□□□ 1.31
CHCHD3-201ENST00000262570 ATP7BP35670 1465 aa23.25■■□□□ 1.31
CHCHD3-201ENST00000262570 ORAI2Q96SN7 254 aa23.24■■□□□ 1.31
CHCHD3-201ENST00000262570 USP32Q8NFA0 1604 aa23.23■■□□□ 1.31
CHCHD3-201ENST00000262570 ESCO1Q5FWF5 840 aa23.23■■□□□ 1.31
CHCHD3-201ENST00000262570 CCDC61Q9Y6R9 512 aa23.23■■□□□ 1.31
CHCHD3-201ENST00000262570 PIP4K2BP78356 416 aa23.23■■□□□ 1.31
CHCHD3-201ENST00000262570 BRINP3Q76B58 766 aa23.23■■□□□ 1.31
CHCHD3-201ENST00000262570 CDCA8Q53HL2 280 aa23.22■■□□□ 1.31
CHCHD3-201ENST00000262570 ATAD2Q6PL18 1390 aa23.21■■□□□ 1.31
CHCHD3-201ENST00000262570 C11orf95C9JLR9 678 aaPredicted RBP23.2■■□□□ 1.3
CHCHD3-201ENST00000262570 SCAF1Q9H7N4 1312 aaKnown RBP23.19■■□□□ 1.3
CHCHD3-201ENST00000262570 PHF8Q9UPP1 1060 aa23.18■■□□□ 1.3
CHCHD3-201ENST00000262570 RGPD8O14715 1765 aaPredicted RBP23.18■■□□□ 1.3
CHCHD3-201ENST00000262570 PLEKHG3A1L390 1219 aa23.17■■□□□ 1.3
CHCHD3-201ENST00000262570 CABP1Q9NZU7 370 aa23.17■■□□□ 1.3
CHCHD3-201ENST00000262570 ROBO1Q9Y6N7 1651 aa23.16■■□□□ 1.3
CHCHD3-201ENST00000262570 PMFBP1Q8TBY8 1022 aa23.16■■□□□ 1.3
CHCHD3-201ENST00000262570 FBXO41Q8TF61 875 aa23.16■■□□□ 1.3
CHCHD3-201ENST00000262570 PPIP5K1Q6PFW1 1433 aa23.16■■□□□ 1.3
CHCHD3-201ENST00000262570 TOPAZ1Q8N9V7 1692 aa23.14■■□□□ 1.3
CHCHD3-201ENST00000262570 FOXO3O43524 673 aa23.14■■□□□ 1.29
CHCHD3-201ENST00000262570 SLC12A5Q9H2X9 1139 aa23.13■■□□□ 1.29
CHCHD3-201ENST00000262570 ITSN1Q15811 1721 aa23.12■■□□□ 1.29
CHCHD3-201ENST00000262570 KIF7Q2M1P5 1343 aa23.12■■□□□ 1.29
CHCHD3-201ENST00000262570 TMC1Q8TDI8 760 aa23.12■■□□□ 1.29
CHCHD3-201ENST00000262570 ACEP12821 1306 aa23.11■■□□□ 1.29
CHCHD3-201ENST00000262570 POLR3AO14802 1390 aaPredicted RBP23.11■■□□□ 1.29
CHCHD3-201ENST00000262570 NINLQ9Y2I6 1382 aa23.11■■□□□ 1.29
CHCHD3-201ENST00000262570 NPHP3Q7Z494 1330 aa23.1■■□□□ 1.29
CHCHD3-201ENST00000262570 NGDNQ8NEJ9 315 aaKnown RBP23.1■■□□□ 1.29
CHCHD3-201ENST00000262570 DDX17Q92841 729 aaKnown RBP23.1■■□□□ 1.29
CHCHD3-201ENST00000262570 KIF1AQ12756 1690 aa23.1■■□□□ 1.29
CHCHD3-201ENST00000262570 POLR3GLQ9BT43 218 aa23.1■■□□□ 1.29
CHCHD3-201ENST00000262570 WASHC2AQ641Q2 1341 aa23.09■■□□□ 1.29
CHCHD3-201ENST00000262570 CCDC7Q96M83 1385 aa23.08■■□□□ 1.28
CHCHD3-201ENST00000262570 AHDC1Q5TGY3 1603 aaPredicted RBP23.07■■□□□ 1.28
CHCHD3-201ENST00000262570 SOS2Q07890 1332 aaPredicted RBP23.07■■□□□ 1.28
CHCHD3-201ENST00000262570 PSME1Q06323 249 aa23.06■■□□□ 1.28
CHCHD3-201ENST00000262570 NHSL1Q5SYE7 1610 aa23.06■■□□□ 1.28
CHCHD3-201ENST00000262570 ZNF692Q9BU19 519 aaPredicted RBP23.06■■□□□ 1.28
CHCHD3-201ENST00000262570 CPSF1Q10570 1443 aaKnown RBP23.05■■□□□ 1.28
CHCHD3-201ENST00000262570 CD163L1Q9NR16 1453 aa23.05■■□□□ 1.28
CHCHD3-201ENST00000262570 XPCQ01831 940 aaPredicted RBP23.05■■□□□ 1.28
CHCHD3-201ENST00000262570 KRT28Q7Z3Y7 464 aa23.05■■□□□ 1.28
CHCHD3-201ENST00000262570 TERF2IPQ9NYB0 399 aa23.04■■□□□ 1.28
CHCHD3-201ENST00000262570 PXDNQ92626 1479 aa23.04■■□□□ 1.28
CHCHD3-201ENST00000262570 HSPA1LP34931 641 aa23.02■■□□□ 1.28
CHCHD3-201ENST00000262570 HDGFL2Q7Z4V5 671 aaPredicted RBP23.02■■□□□ 1.28
CHCHD3-201ENST00000262570 A0A1W2PP64 1363 aa23.02■■□□□ 1.28
CHCHD3-201ENST00000262570 MYOM1P52179 1685 aa23.02■■□□□ 1.27
CHCHD3-201ENST00000262570 ANKRD36BQ8N2N9 1353 aa23.01■■□□□ 1.27
CHCHD3-201ENST00000262570 USP6P35125 1406 aa23■■□□□ 1.27
CHCHD3-201ENST00000262570 KTN1Q86UP2 1357 aaKnown RBP23■■□□□ 1.27
CHCHD3-201ENST00000262570 PHLPP1O60346 1717 aa22.99■■□□□ 1.27
CHCHD3-201ENST00000262570 ZNF316A6NFI3 1004 aaPredicted RBP22.98■■□□□ 1.27
CHCHD3-201ENST00000262570 SSH2Q76I76 1423 aa22.98■■□□□ 1.27
CHCHD3-201ENST00000262570 LRRC59Q96AG4 307 aaKnown RBP22.98■■□□□ 1.27
CHCHD3-201ENST00000262570 COL16A1Q07092 1604 aaPredicted RBP22.98■■□□□ 1.27
CHCHD3-201ENST00000262570 SBNO1A3KN83 1393 aa22.98■■□□□ 1.27
CHCHD3-201ENST00000262570 BRD4O60885 1362 aaPredicted RBP22.98■■□□□ 1.27
CHCHD3-201ENST00000262570 PANK3Q9H999 370 aa22.97■■□□□ 1.27
CHCHD3-201ENST00000262570 SPATA31A3Q5VYP0 1347 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms