RNA–Protein interactions for RNA: ENST00000262210.9

CSPP1-201, Transcript of centrosome and spindle pole associated protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPP1, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPP1-201ENST00000262210 LRRC7Q96NW7 1537 aa7.67□□□□□ -1.18
CSPP1-201ENST00000262210 TRIM52Q96A61 297 aa7.66□□□□□ -1.18
CSPP1-201ENST00000262210 TSPY4P0CV99 314 aa7.66□□□□□ -1.18
CSPP1-201ENST00000262210 TSPY10P0CW01 314 aa7.66□□□□□ -1.18
CSPP1-201ENST00000262210 SENP3-EIF4A1A0A087X0R7 540 aa7.66□□□□□ -1.18
CSPP1-201ENST00000262210 RBM33Q96EV2 1170 aaKnown RBP7.65□□□□□ -1.18
CSPP1-201ENST00000262210 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.65□□□□□ -1.18
CSPP1-201ENST00000262210 DMRT2Q9Y5R5 561 aa7.65□□□□□ -1.19
CSPP1-201ENST00000262210 C14orf93Q9H972 538 aaKnown RBP7.64□□□□□ -1.19
CSPP1-201ENST00000262210 LTN1O94822 1766 aa7.64□□□□□ -1.19
CSPP1-201ENST00000262210 KDM2AQ9Y2K7 1162 aa7.64□□□□□ -1.19
CSPP1-201ENST00000262210 SPTBN5Q9NRC6 3674 aaKnown RBP7.64□□□□□ -1.19
CSPP1-201ENST00000262210 SCAF11Q99590 1463 aaKnown RBP7.64□□□□□ -1.19
CSPP1-201ENST00000262210 REV3LO60673 3130 aa7.63□□□□□ -1.19
CSPP1-201ENST00000262210 LTBP4Q8N2S1 1624 aa7.63□□□□□ -1.19
CSPP1-201ENST00000262210 AMER1Q5JTC6 1135 aaPredicted RBP7.63□□□□□ -1.19
CSPP1-201ENST00000262210 LMO7Q8WWI1 1683 aa7.63□□□□□ -1.19
CSPP1-201ENST00000262210 MED1Q15648 1581 aaPredicted RBP7.63□□□□□ -1.19
CSPP1-201ENST00000262210 TMEM2Q9UHN6 1383 aa7.63□□□□□ -1.19
CSPP1-201ENST00000262210 DIP2AQ14689 1571 aa7.62□□□□□ -1.19
CSPP1-201ENST00000262210 DDX10Q13206 875 aaKnown RBP7.62□□□□□ -1.19
CSPP1-201ENST00000262210 VCANP13611 3396 aa7.62□□□□□ -1.19
CSPP1-201ENST00000262210 YTHDC2Q9H6S0 1430 aaKnown RBP7.62□□□□□ -1.19
CSPP1-201ENST00000262210 WAPLQ7Z5K2 1190 aa7.62□□□□□ -1.19
CSPP1-201ENST00000262210 CPSF1Q10570 1443 aaKnown RBP7.62□□□□□ -1.19
CSPP1-201ENST00000262210 PARD3Q8TEW0 1356 aa7.62□□□□□ -1.19
CSPP1-201ENST00000262210 FAM208AQ9UK61 1670 aaKnown RBP7.61□□□□□ -1.19
CSPP1-201ENST00000262210 MLECQ14165 292 aa7.61□□□□□ -1.19
CSPP1-201ENST00000262210 SETD1BQ9UPS6 1966 aaKnown RBP7.61□□□□□ -1.19
CSPP1-201ENST00000262210 RIMS2Q9UQ26 1411 aa7.61□□□□□ -1.19
CSPP1-201ENST00000262210 WASHC2CQ9Y4E1 1318 aa7.61□□□□□ -1.19
CSPP1-201ENST00000262210 IQSEC2Q5JU85 1478 aa7.61□□□□□ -1.19
CSPP1-201ENST00000262210 CAMTA1Q9Y6Y1 1673 aa7.6□□□□□ -1.19
CSPP1-201ENST00000262210 SZT2Q5T011 3432 aa7.6□□□□□ -1.19
CSPP1-201ENST00000262210 DIEXFQ68CQ4 756 aaKnown RBP7.6□□□□□ -1.19
CSPP1-201ENST00000262210 ZRANB1Q9UGI0 708 aa7.6□□□□□ -1.19
CSPP1-201ENST00000262210 SBNO2Q9Y2G9 1366 aa7.6□□□□□ -1.19
CSPP1-201ENST00000262210 ITSN1Q15811 1721 aa7.6□□□□□ -1.19
CSPP1-201ENST00000262210 PHRF1Q9P1Y6 1649 aaKnown RBP7.6□□□□□ -1.19
CSPP1-201ENST00000262210 LRPPRCP42704 1394 aaKnown RBP7.6□□□□□ -1.19
CSPP1-201ENST00000262210 SCAF1Q9H7N4 1312 aaKnown RBP7.59□□□□□ -1.19
CSPP1-201ENST00000262210 TONSLQ96HA7 1378 aa7.59□□□□□ -1.19
CSPP1-201ENST00000262210 UNC80Q8N2C7 3258 aa7.59□□□□□ -1.19
CSPP1-201ENST00000262210 RTN4Q9NQC3 1192 aaKnown RBP7.59□□□□□ -1.19
CSPP1-201ENST00000262210 CDC42BPGQ6DT37 1551 aa7.59□□□□□ -1.19
CSPP1-201ENST00000262210 SIPA1L3O60292 1781 aaPredicted RBP7.59□□□□□ -1.19
CSPP1-201ENST00000262210 NFAT5O94916 1531 aa7.58□□□□□ -1.2
CSPP1-201ENST00000262210 MUC3AQ02505 3323 aa7.58□□□□□ -1.2
CSPP1-201ENST00000262210 DNAH14Q0VDD8 3507 aa7.58□□□□□ -1.2
CSPP1-201ENST00000262210 SPINK5Q9NQ38 1064 aaPredicted RBP7.58□□□□□ -1.2
CSPP1-201ENST00000262210 COL16A1Q07092 1604 aaPredicted RBP7.58□□□□□ -1.2
CSPP1-201ENST00000262210 TIMELESSQ9UNS1 1208 aa7.58□□□□□ -1.2
CSPP1-201ENST00000262210 WDFY3Q8IZQ1 3526 aa7.57□□□□□ -1.2
CSPP1-201ENST00000262210 ROCK2O75116 1388 aaKnown RBP7.57□□□□□ -1.2
CSPP1-201ENST00000262210 A0A1W2PP64 1363 aa7.57□□□□□ -1.2
CSPP1-201ENST00000262210 TOGARAM1Q9Y4F4 1720 aa7.55□□□□□ -1.2
CSPP1-201ENST00000262210 AEBP2Q6ZN18 517 aaPredicted RBP7.55□□□□□ -1.2
CSPP1-201ENST00000262210 PRKRIP1Q9H875 184 aaPredicted RBP7.55□□□□□ -1.2
CSPP1-201ENST00000262210 TNRQ92752 1358 aa7.55□□□□□ -1.2
CSPP1-201ENST00000262210 ADAMTS7Q9UKP4 1686 aa7.55□□□□□ -1.2
CSPP1-201ENST00000262210 NHSL1Q5SYE7 1610 aa7.54□□□□□ -1.2
CSPP1-201ENST00000262210 PLEKHG1Q9ULL1 1385 aa7.54□□□□□ -1.2
CSPP1-201ENST00000262210 LRRC37A3O60309 1634 aa7.54□□□□□ -1.2
CSPP1-201ENST00000262210 SLC12A5Q9H2X9 1139 aa7.54□□□□□ -1.2
CSPP1-201ENST00000262210 NPM1P06748 294 aaKnown RBP eCLIP7.52□□□□□ -1.21
CSPP1-201ENST00000262210 KIF1AQ12756 1690 aa7.52□□□□□ -1.21
CSPP1-201ENST00000262210 PTCH1Q13635 1447 aa7.51□□□□□ -1.21
CSPP1-201ENST00000262210 DMDP11532 3685 aa7.51□□□□□ -1.21
CSPP1-201ENST00000262210 HSPA2P54652 639 aa7.51□□□□□ -1.21
CSPP1-201ENST00000262210 WNK3Q9BYP7 1800 aa7.51□□□□□ -1.21
CSPP1-201ENST00000262210 ZNF326Q5BKZ1 582 aaKnown RBP7.51□□□□□ -1.21
CSPP1-201ENST00000262210 TRAK1Q9UPV9 953 aa7.51□□□□□ -1.21
CSPP1-201ENST00000262210 ZNF521Q96K83 1311 aa7.51□□□□□ -1.21
CSPP1-201ENST00000262210 ABCC11Q96J66 1382 aa7.51□□□□□ -1.21
CSPP1-201ENST00000262210 SLC26A8Q96RN1 970 aa7.51□□□□□ -1.21
CSPP1-201ENST00000262210 CASZ1Q86V15 1759 aa7.5□□□□□ -1.21
CSPP1-201ENST00000262210 PXDNQ92626 1479 aa7.5□□□□□ -1.21
CSPP1-201ENST00000262210 OVOS2A0A0J9YW53 1432 aa7.5□□□□□ -1.21
CSPP1-201ENST00000262210 OVOS2Q6IE36 1432 aa7.5□□□□□ -1.21
CSPP1-201ENST00000262210 DDX17Q92841 729 aaKnown RBP7.5□□□□□ -1.21
CSPP1-201ENST00000262210 BLMP54132 1417 aaPredicted RBP7.5□□□□□ -1.21
CSPP1-201ENST00000262210 SMG6Q86US8 1419 aaKnown RBP7.5□□□□□ -1.21
CSPP1-201ENST00000262210 KCNA6P17658 529 aa7.5□□□□□ -1.21
CSPP1-201ENST00000262210 TRHP20396 242 aaPredicted RBP7.49□□□□□ -1.21
CSPP1-201ENST00000262210 PNISRQ8TF01 805 aaKnown RBP7.49□□□□□ -1.21
CSPP1-201ENST00000262210 CABP2Q9NPB3 220 aa7.49□□□□□ -1.21
CSPP1-201ENST00000262210 CARD11Q9BXL7 1154 aa7.49□□□□□ -1.21
CSPP1-201ENST00000262210 NRAPQ86VF7 1730 aa7.48□□□□□ -1.21
CSPP1-201ENST00000262210 COL4A1P02462 1669 aa7.48□□□□□ -1.21
CSPP1-201ENST00000262210 TUBGCP6Q96RT7 1819 aa7.48□□□□□ -1.21
CSPP1-201ENST00000262210 ZEB1P37275 1124 aaPredicted RBP7.48□□□□□ -1.21
CSPP1-201ENST00000262210 PRAM1Q96QH2 718 aa7.48□□□□□ -1.21
CSPP1-201ENST00000262210 C5P01031 1676 aa7.48□□□□□ -1.21
CSPP1-201ENST00000262210 PANK3Q9H999 370 aa7.48□□□□□ -1.21
CSPP1-201ENST00000262210 PNPLA6Q8IY17 1366 aa7.47□□□□□ -1.21
CSPP1-201ENST00000262210 FAM135BQ49AJ0 1406 aa7.47□□□□□ -1.21
CSPP1-201ENST00000262210 TXNDC2Q86VQ3 553 aa7.47□□□□□ -1.21
CSPP1-201ENST00000262210 MST1RQ04912 1400 aa7.46□□□□□ -1.21
CSPP1-201ENST00000262210 SAFB2Q14151 953 aaKnown RBP eCLIP7.46□□□□□ -1.224e-7■■□□□ 12.2
CSPP1-201ENST00000262210 ROBO1Q9Y6N7 1651 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms