RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 AMOTL1Q8IY63 956 aa17.25■□□□□ 0.35
CDH1-201ENST00000261769 HSP90AB4PQ58FF6 505 aa17.25■□□□□ 0.35
CDH1-201ENST00000261769 PRKAR2BP31323 418 aa17.25■□□□□ 0.35
CDH1-201ENST00000261769 G3BP1Q13283 466 aaKnown RBP eCLIP17.25■□□□□ 0.35
CDH1-201ENST00000261769 RBM33Q96EV2 1170 aaKnown RBP17.25■□□□□ 0.35
CDH1-201ENST00000261769 BRD4O60885 1362 aaPredicted RBP17.25■□□□□ 0.35
CDH1-201ENST00000261769 NCOA1Q15788 1441 aa17.24■□□□□ 0.35
CDH1-201ENST00000261769 RBM42Q9BTD8 480 aaKnown RBP17.24■□□□□ 0.35
CDH1-201ENST00000261769 PNISRQ8TF01 805 aaKnown RBP17.24■□□□□ 0.35
CDH1-201ENST00000261769 ATP10BO94823 1461 aa17.24■□□□□ 0.35
CDH1-201ENST00000261769 NBPF8Q3BBV2 869 aa17.24■□□□□ 0.35
CDH1-201ENST00000261769 DZIP1LQ8IYY4 767 aaKnown RBP17.24■□□□□ 0.35
CDH1-201ENST00000261769 TNRQ92752 1358 aa17.23■□□□□ 0.35
CDH1-201ENST00000261769 GOLGA6L6A8MZA4 724 aa17.23■□□□□ 0.35
CDH1-201ENST00000261769 NRDCO43847 1150 aa17.23■□□□□ 0.35
CDH1-201ENST00000261769 CHMP4CQ96CF2 233 aa17.23■□□□□ 0.35
CDH1-201ENST00000261769 WDR7Q9Y4E6 1490 aa17.23■□□□□ 0.35
CDH1-201ENST00000261769 PPP2R1AP30153 589 aa17.23■□□□□ 0.35
CDH1-201ENST00000261769 ZNF530Q6P9A1 599 aaPredicted RBP17.22■□□□□ 0.35
CDH1-201ENST00000261769 PTPN23Q9H3S7 1636 aa17.22■□□□□ 0.35
CDH1-201ENST00000261769 SULT6B1Q6IMI4 303 aa17.22■□□□□ 0.35
CDH1-201ENST00000261769 KIF3AQ9Y496 699 aa17.22■□□□□ 0.35
CDH1-201ENST00000261769 CCDC30Q5VVM6 783 aa17.22■□□□□ 0.35
CDH1-201ENST00000261769 DDX54Q8TDD1 881 aaKnown RBP17.22■□□□□ 0.35
CDH1-201ENST00000261769 CABP4P57796 275 aa17.21■□□□□ 0.35
CDH1-201ENST00000261769 AIMP1Q12904 312 aaKnown RBP17.21■□□□□ 0.35
CDH1-201ENST00000261769 ANKRD45Q5TZF3 282 aa17.21■□□□□ 0.35
CDH1-201ENST00000261769 TCP11L2Q8N4U5 519 aa17.21■□□□□ 0.35
CDH1-201ENST00000261769 IFIT2P09913 472 aaKnown RBP17.21■□□□□ 0.35
CDH1-201ENST00000261769 TRIM34Q9BYJ4 488 aa17.21■□□□□ 0.35
CDH1-201ENST00000261769 PHF8Q9UPP1 1060 aa17.21■□□□□ 0.35
CDH1-201ENST00000261769 CADPS2Q86UW7 1296 aa17.21■□□□□ 0.35
CDH1-201ENST00000261769 CCDC34Q96HJ3 373 aa17.21■□□□□ 0.35
CDH1-201ENST00000261769 XPCQ01831 940 aaPredicted RBP17.2■□□□□ 0.34
CDH1-201ENST00000261769 KIF6Q6ZMV9 814 aa17.2■□□□□ 0.34
CDH1-201ENST00000261769 LRPPRCP42704 1394 aaKnown RBP17.2■□□□□ 0.34
CDH1-201ENST00000261769 COG6Q9Y2V7 657 aa17.2■□□□□ 0.34
CDH1-201ENST00000261769 ZC3H6P61129 1189 aaKnown RBP17.19■□□□□ 0.34
CDH1-201ENST00000261769 WAPLQ7Z5K2 1190 aa17.19■□□□□ 0.34
CDH1-201ENST00000261769 RUFY2Q8WXA3 655 aa17.19■□□□□ 0.34
CDH1-201ENST00000261769 MFAP1P55081 439 aaKnown RBP17.19■□□□□ 0.34
CDH1-201ENST00000261769 RILPL2Q969X0 211 aa17.18■□□□□ 0.34
CDH1-201ENST00000261769 GPATCH8Q9UKJ3 1502 aaKnown RBP17.18■□□□□ 0.34
CDH1-201ENST00000261769 RAPGEF6Q8TEU7 1601 aa17.18■□□□□ 0.34
CDH1-201ENST00000261769 PLCB2Q00722 1185 aa17.18■□□□□ 0.34
CDH1-201ENST00000261769 CENPQQ7L2Z9 268 aaPredicted RBP17.18■□□□□ 0.34
CDH1-201ENST00000261769 DIAPH3Q9NSV4 1193 aa17.18■□□□□ 0.34
CDH1-201ENST00000261769 ZNF518AQ6AHZ1 1483 aa17.18■□□□□ 0.34
CDH1-201ENST00000261769 ADAMTS8Q9UP79 889 aa17.17■□□□□ 0.34
CDH1-201ENST00000261769 CLSTN1O94985 981 aa17.17■□□□□ 0.34
CDH1-201ENST00000261769 RRP1P56182 461 aaKnown RBP17.17■□□□□ 0.34
CDH1-201ENST00000261769 WDR62O43379 1518 aa17.16■□□□□ 0.34
CDH1-201ENST00000261769 WWC1Q8IX03 1113 aa17.15■□□□□ 0.34
CDH1-201ENST00000261769 AAMPQ13685 434 aa17.15■□□□□ 0.34
CDH1-201ENST00000261769 KDM5BQ9UGL1 1544 aa17.15■□□□□ 0.34
CDH1-201ENST00000261769 FOXO3O43524 673 aa17.15■□□□□ 0.34
CDH1-201ENST00000261769 UBTFL1P0CB47 393 aaPredicted RBP17.15■□□□□ 0.34
CDH1-201ENST00000261769 THOC2Q8NI27 1593 aaKnown RBP17.15■□□□□ 0.34
CDH1-201ENST00000261769 FBXW7Q969H0 707 aa17.15■□□□□ 0.34
CDH1-201ENST00000261769 ADAMTS12P58397 1594 aa17.15■□□□□ 0.34
CDH1-201ENST00000261769 WASLO00401 505 aaPredicted RBP17.14■□□□□ 0.33
CDH1-201ENST00000261769 A2MP01023 1474 aa17.14■□□□□ 0.33
CDH1-201ENST00000261769 UGGT2Q9NYU1 1516 aa17.14■□□□□ 0.33
CDH1-201ENST00000261769 FAM135AQ9P2D6 1515 aa17.14■□□□□ 0.33
CDH1-201ENST00000261769 TOM1O60784 492 aa17.14■□□□□ 0.33
CDH1-201ENST00000261769 GNAI3P08754 354 aa17.14■□□□□ 0.33
CDH1-201ENST00000261769 ST18O60284 1047 aa17.14■□□□□ 0.33
CDH1-201ENST00000261769 SYNE3Q6ZMZ3 975 aa17.13■□□□□ 0.33
CDH1-201ENST00000261769 NOP58Q9Y2X3 529 aaKnown RBP17.13■□□□□ 0.33
CDH1-201ENST00000261769 UHRF1BP1LA0JNW5 1464 aa17.12■□□□□ 0.33
CDH1-201ENST00000261769 PLIN1O60240 522 aa17.12■□□□□ 0.33
CDH1-201ENST00000261769 CPLX2Q6PUV4 134 aaKnown RBP17.12■□□□□ 0.33
CDH1-201ENST00000261769 GBP4Q96PP9 640 aa17.12■□□□□ 0.33
CDH1-201ENST00000261769 HDGFL1Q5TGJ6 251 aa17.12■□□□□ 0.33
CDH1-201ENST00000261769 NGLY1Q96IV0 654 aa17.12■□□□□ 0.33
CDH1-201ENST00000261769 PTMSP20962 102 aa17.11■□□□□ 0.33
CDH1-201ENST00000261769 AKAP17AQ02040 695 aaKnown RBP17.11■□□□□ 0.33
CDH1-201ENST00000261769 NUP153P49790 1475 aaKnown RBP17.11■□□□□ 0.33
CDH1-201ENST00000261769 ADGRF5Q8IZF2 1346 aa17.11■□□□□ 0.33
CDH1-201ENST00000261769 SPRYD3Q8NCJ5 442 aa17.11■□□□□ 0.33
CDH1-201ENST00000261769 ERC2O15083 957 aa17.11■□□□□ 0.33
CDH1-201ENST00000261769 CTDP1Q9Y5B0 961 aaPredicted RBP17.11■□□□□ 0.33
CDH1-201ENST00000261769 ABCC10Q5T3U5 1492 aa17.1■□□□□ 0.33
CDH1-201ENST00000261769 RRS1Q15050 365 aaKnown RBP17.1■□□□□ 0.33
CDH1-201ENST00000261769 MSH6P52701 1360 aa17.1■□□□□ 0.33
CDH1-201ENST00000261769 MARCH6O60337 910 aa17.1■□□□□ 0.33
CDH1-201ENST00000261769 APPP05067 770 aa17.1■□□□□ 0.33
CDH1-201ENST00000261769 EIF4G3O43432 1585 aaKnown RBP17.1■□□□□ 0.33
CDH1-201ENST00000261769 FCHSD2O94868 740 aa17.1■□□□□ 0.33
CDH1-201ENST00000261769 NUP160Q12769 1436 aa17.1■□□□□ 0.33
CDH1-201ENST00000261769 ABCC2Q92887 1545 aa17.1■□□□□ 0.33
CDH1-201ENST00000261769 TWISTNBQ3B726 338 aaPredicted RBP17.09■□□□□ 0.33
CDH1-201ENST00000261769 CRBNQ96SW2 442 aa17.09■□□□□ 0.33
CDH1-201ENST00000261769 C14orf93Q9H972 538 aaKnown RBP17.09■□□□□ 0.33
CDH1-201ENST00000261769 ZKSCAN1P17029 563 aaPredicted RBP17.09■□□□□ 0.33
CDH1-201ENST00000261769 ADAMTS2O95450 1211 aa17.09■□□□□ 0.33
CDH1-201ENST00000261769 RASSF8Q8NHQ8 419 aa17.08■□□□□ 0.33
CDH1-201ENST00000261769 NEUROD6Q96NK8 337 aa17.08■□□□□ 0.33
CDH1-201ENST00000261769 REC8O95072 547 aa17.08■□□□□ 0.32
CDH1-201ENST00000261769 KRT28Q7Z3Y7 464 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms