RNA–Protein interactions for RNA: ENST00000254853.9

SLC52A1-201, Transcript of solute carrier family 52 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC52A1, Length 2,377 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1-201ENST00000254853 NINLQ9Y2I6 1382 aa22.08■■□□□ 1.12
SLC52A1-201ENST00000254853 CLUAP1Q96AJ1 413 aa22.07■■□□□ 1.12
SLC52A1-201ENST00000254853 C14orf93Q9H972 538 aaKnown RBP22.07■■□□□ 1.12
SLC52A1-201ENST00000254853 ASXL2Q76L83 1435 aa22.07■■□□□ 1.12
SLC52A1-201ENST00000254853 RUNDC1Q96C34 613 aa22.07■■□□□ 1.12
SLC52A1-201ENST00000254853 TMEM132EQ6IEE7 984 aa22.06■■□□□ 1.12
SLC52A1-201ENST00000254853 TCP11L2Q8N4U5 519 aa22.05■■□□□ 1.12
SLC52A1-201ENST00000254853 FRAT1Q92837 279 aaPredicted RBP22.05■■□□□ 1.12
SLC52A1-201ENST00000254853 ZC3H13Q5T200 1668 aaKnown RBP22.05■■□□□ 1.12
SLC52A1-201ENST00000254853 QRICH2Q9H0J4 1663 aa22.05■■□□□ 1.12
SLC52A1-201ENST00000254853 ADGRB1O14514 1584 aa22.04■■□□□ 1.12
SLC52A1-201ENST00000254853 IQSEC2Q5JU85 1478 aa22.04■■□□□ 1.12
SLC52A1-201ENST00000254853 IL27Q8NEV9 243 aa22.04■■□□□ 1.12
SLC52A1-201ENST00000254853 NPATQ14207 1427 aa22.03■■□□□ 1.12
SLC52A1-201ENST00000254853 ZNF518AQ6AHZ1 1483 aa22.03■■□□□ 1.12
SLC52A1-201ENST00000254853 RARSP54136 660 aaKnown RBP22.03■■□□□ 1.12
SLC52A1-201ENST00000254853 PHF23Q9BUL5 403 aaPredicted RBP22.02■■□□□ 1.12
SLC52A1-201ENST00000254853 PPLO60437 1756 aa22.02■■□□□ 1.12
SLC52A1-201ENST00000254853 MTHFSP49914 203 aa22.02■■□□□ 1.11
SLC52A1-201ENST00000254853 USP19O94966 1318 aa22.01■■□□□ 1.11
SLC52A1-201ENST00000254853 GSE1Q14687 1217 aa22.01■■□□□ 1.11
SLC52A1-201ENST00000254853 GGT6Q6P531 493 aa22■■□□□ 1.11
SLC52A1-201ENST00000254853 MAPK8IP3Q9UPT6 1336 aa22■■□□□ 1.11
SLC52A1-201ENST00000254853 WDR63Q8IWG1 891 aa21.99■■□□□ 1.11
SLC52A1-201ENST00000254853 CFAP65Q6ZU64 1925 aaKnown RBP21.99■■□□□ 1.11
SLC52A1-201ENST00000254853 TNNQ9UQP3 1299 aa21.99■■□□□ 1.11
SLC52A1-201ENST00000254853 RLBP1P12271 317 aa21.98■■□□□ 1.11
SLC52A1-201ENST00000254853 USP32Q8NFA0 1604 aa21.97■■□□□ 1.11
SLC52A1-201ENST00000254853 VIRMAQ69YN4 1812 aaKnown RBP21.97■■□□□ 1.11
SLC52A1-201ENST00000254853 SEC24BO95487 1268 aa21.97■■□□□ 1.11
SLC52A1-201ENST00000254853 FRMPD1Q5SYB0 1578 aa21.97■■□□□ 1.11
SLC52A1-201ENST00000254853 CFAP53Q96M91 514 aa21.97■■□□□ 1.11
SLC52A1-201ENST00000254853 BCL2L13Q9BXK5 485 aa21.96■■□□□ 1.11
SLC52A1-201ENST00000254853 RPGRIP1LQ68CZ1 1315 aa21.96■■□□□ 1.11
SLC52A1-201ENST00000254853 PCDHB15Q9Y5E8 787 aa21.96■■□□□ 1.11
SLC52A1-201ENST00000254853 CCDC27Q2M243 656 aa21.95■■□□□ 1.1
SLC52A1-201ENST00000254853 FRAT2O75474 233 aaPredicted RBP21.94■■□□□ 1.1
SLC52A1-201ENST00000254853 NUTM2DQ5VT03 806 aaPredicted RBP21.94■■□□□ 1.1
SLC52A1-201ENST00000254853 PMFBP1Q8TBY8 1022 aa21.94■■□□□ 1.1
SLC52A1-201ENST00000254853 POGZQ7Z3K3 1410 aa21.93■■□□□ 1.1
SLC52A1-201ENST00000254853 AAMPQ13685 434 aa21.92■■□□□ 1.1
SLC52A1-201ENST00000254853 EVC2Q86UK5 1308 aa21.92■■□□□ 1.1
SLC52A1-201ENST00000254853 TULP4Q9NRJ4 1543 aa21.91■■□□□ 1.1
SLC52A1-201ENST00000254853 GLI2P10070 1586 aa21.91■■□□□ 1.1
SLC52A1-201ENST00000254853 ANKRD36BQ8N2N9 1353 aa21.91■■□□□ 1.1
SLC52A1-201ENST00000254853 ABCC3O15438 1527 aa21.91■■□□□ 1.1
SLC52A1-201ENST00000254853 HECW2Q9P2P5 1572 aa21.91■■□□□ 1.1
SLC52A1-201ENST00000254853 U2AF1L5P0DN76 240 aaPredicted RBP21.9■■□□□ 1.1
SLC52A1-201ENST00000254853 U2AF1Q01081 240 aaKnown RBP eCLIP21.9■■□□□ 1.1
SLC52A1-201ENST00000254853 MLH3Q9UHC1 1453 aa21.9■■□□□ 1.1
SLC52A1-201ENST00000254853 RTN4Q9NQC3 1192 aaKnown RBP21.9■■□□□ 1.1
SLC52A1-201ENST00000254853 PUS7Q96PZ0 661 aaKnown RBP21.89■■□□□ 1.1
SLC52A1-201ENST00000254853 MYH16Q9H6N6 1097 aa21.89■■□□□ 1.1
SLC52A1-201ENST00000254853 CABP2Q9NPB3 220 aa21.89■■□□□ 1.1
SLC52A1-201ENST00000254853 NLRP1Q9C000 1473 aa21.88■■□□□ 1.09
SLC52A1-201ENST00000254853 NSD2O96028 1365 aa21.88■■□□□ 1.09
SLC52A1-201ENST00000254853 PDZRN3Q9UPQ7 1066 aa21.88■■□□□ 1.09
SLC52A1-201ENST00000254853 CD109Q6YHK3 1445 aa21.88■■□□□ 1.09
SLC52A1-201ENST00000254853 ARHGEF28Q8N1W1 1705 aaKnown RBP21.87■■□□□ 1.09
SLC52A1-201ENST00000254853 NCBP3Q53F19 620 aaKnown RBP21.86■■□□□ 1.09
SLC52A1-201ENST00000254853 BRPF3Q9ULD4 1205 aa21.86■■□□□ 1.09
SLC52A1-201ENST00000254853 VGFO15240 615 aaPredicted RBP21.85■■□□□ 1.09
SLC52A1-201ENST00000254853 SAFB2Q14151 953 aaKnown RBP eCLIP21.85■■□□□ 1.09
SLC52A1-201ENST00000254853 SIGLEC1Q9BZZ2 1709 aa21.85■■□□□ 1.09
SLC52A1-201ENST00000254853 RWDD1Q9H446 243 aaPredicted RBP21.85■■□□□ 1.09
SLC52A1-201ENST00000254853 CAMSAP1Q5T5Y3 1602 aa21.85■■□□□ 1.09
SLC52A1-201ENST00000254853 NPM1P06748 294 aaKnown RBP eCLIP21.84■■□□□ 1.09
SLC52A1-201ENST00000254853 ADGRB2O60241 1585 aa21.84■■□□□ 1.09
SLC52A1-201ENST00000254853 NEXMIFQ5QGS0 1516 aa21.84■■□□□ 1.09
SLC52A1-201ENST00000254853 MVPQ14764 893 aaKnown RBP21.84■■□□□ 1.09
SLC52A1-201ENST00000254853 CFAP74Q9C0B2 1584 aa21.83■■□□□ 1.09
SLC52A1-201ENST00000254853 BECN1Q14457 450 aa21.83■■□□□ 1.09
SLC52A1-201ENST00000254853 TSR2Q969E8 191 aaKnown RBP21.83■■□□□ 1.08
SLC52A1-201ENST00000254853 ZKSCAN2Q63HK3 967 aa21.82■■□□□ 1.08
SLC52A1-201ENST00000254853 ZMYM3Q14202 1370 aa21.82■■□□□ 1.08
SLC52A1-201ENST00000254853 PIK3C2BO00750 1634 aa21.81■■□□□ 1.08
SLC52A1-201ENST00000254853 A0A1W2PP64 1363 aa21.8■■□□□ 1.08
SLC52A1-201ENST00000254853 DZIP1LQ8IYY4 767 aaKnown RBP21.8■■□□□ 1.08
SLC52A1-201ENST00000254853 SENP3Q9H4L4 574 aaPredicted RBP21.8■■□□□ 1.08
SLC52A1-201ENST00000254853 U2SURPO15042 1029 aaKnown RBP21.8■■□□□ 1.08
SLC52A1-201ENST00000254853 FTSJ3Q8IY81 847 aaKnown RBP21.8■■□□□ 1.08
SLC52A1-201ENST00000254853 PLEKHF1Q96S99 279 aa21.8■■□□□ 1.08
SLC52A1-201ENST00000254853 ABCC11Q96J66 1382 aa21.79■■□□□ 1.08
SLC52A1-201ENST00000254853 TBC1D32Q96NH3 1257 aa21.79■■□□□ 1.08
SLC52A1-201ENST00000254853 GGNBP2Q9H3C7 697 aa21.79■■□□□ 1.08
SLC52A1-201ENST00000254853 STK26Q9P289 416 aa21.79■■□□□ 1.08
SLC52A1-201ENST00000254853 EXOSC9Q06265 439 aaKnown RBP21.79■■□□□ 1.08
SLC52A1-201ENST00000254853 UPF2Q9HAU5 1272 aaKnown RBP21.79■■□□□ 1.08
SLC52A1-201ENST00000254853 RAPGEF3O95398 923 aa21.78■■□□□ 1.08
SLC52A1-201ENST00000254853 SLKQ9H2G2 1235 aaPredicted RBP21.78■■□□□ 1.08
SLC52A1-201ENST00000254853 SRPK2P78362 688 aaKnown RBP21.77■■□□□ 1.08
SLC52A1-201ENST00000254853 CT47B1P0C2W7 299 aaPredicted RBP21.77■■□□□ 1.08
SLC52A1-201ENST00000254853 TMPOP42166 694 aaKnown RBP21.77■■□□□ 1.08
SLC52A1-201ENST00000254853 IDI1Q13907 227 aa21.77■■□□□ 1.08
SLC52A1-201ENST00000254853 SMC4Q9NTJ3 1288 aa21.77■■□□□ 1.08
SLC52A1-201ENST00000254853 TRIM35Q9UPQ4 493 aa21.77■■□□□ 1.08
SLC52A1-201ENST00000254853 COL3A1P02461 1466 aaPredicted RBP21.75■■□□□ 1.07
SLC52A1-201ENST00000254853 TRIM27P14373 513 aa21.74■■□□□ 1.07
SLC52A1-201ENST00000254853 SSH1Q8WYL5 1049 aa21.74■■□□□ 1.07
SLC52A1-201ENST00000254853 ANTXR1Q9H6X2 564 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms